BLASTX nr result

ID: Glycyrrhiza24_contig00012804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012804
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533950.1| PREDICTED: putative clathrin assembly protei...    87   1e-15
ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus...    81   8e-14
ref|XP_003531148.1| PREDICTED: putative clathrin assembly protei...    74   1e-11
ref|XP_003531147.1| PREDICTED: putative clathrin assembly protei...    74   1e-11
ref|XP_003531146.1| PREDICTED: putative clathrin assembly protei...    74   1e-11

>ref|XP_003533950.1| PREDICTED: putative clathrin assembly protein At2g01600-like
           [Glycine max]
          Length = 554

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/81 (56%), Positives = 47/81 (58%)
 Frame = +2

Query: 2   PNPFEVHDPFALSSNIXXXXXXXXXXXXXXXXXXFGXXXXXXXXXXHMLMNPANPFGDAG 181
           PNPFEV DPFALSS+I                  F           HMLMNPANPFGDAG
Sbjct: 471 PNPFEVQDPFALSSSIPPTSTVQMAAIAQQHINPFLHYQPYQPLQQHMLMNPANPFGDAG 530

Query: 182 YQAFPVNTVSHHPHNNNPFGS 244
           Y AFPVN VS HPHN NPFGS
Sbjct: 531 YGAFPVNPVS-HPHNKNPFGS 550


>ref|XP_002527787.1| clathrin assembly protein, putative [Ricinus communis]
           gi|223532822|gb|EEF34597.1| clathrin assembly protein,
           putative [Ricinus communis]
          Length = 567

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/84 (48%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
 Frame = +2

Query: 2   PNPFEVHDPFALSSNIXXXXXXXXXXXXXXXXXXFGXXXXXXXXXX---HMLMNPANPFG 172
           PNPFEVHDPFA+S++I                  FG             H++M+PANPFG
Sbjct: 481 PNPFEVHDPFAMSNSIAPPSAVQMAAMTQQPPNPFGPYQPTYPQPQQQQHLMMSPANPFG 540

Query: 173 DAGYQAFPVNTVSHHPHNNNPFGS 244
           DAG+  FPVNTV+ HPH+NNPFGS
Sbjct: 541 DAGFGTFPVNTVT-HPHSNNPFGS 563


>ref|XP_003531148.1| PREDICTED: putative clathrin assembly protein At2g01600-like
           isoform 3 [Glycine max]
          Length = 575

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/87 (45%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
 Frame = +2

Query: 2   PNPFEVHDPFALSSNIXXXXXXXXXXXXXXXXXX------FGXXXXXXXXXXHMLMNPAN 163
           PNPFE+ DPFALSS+I                        F           HMLMNPAN
Sbjct: 485 PNPFEMQDPFALSSSIPPPPAVQLAAMQQQANPFGPYQQPFQPQPQPQQQQHHMLMNPAN 544

Query: 164 PFGDAGYQAFPVNTVSHHPHNNNPFGS 244
           PFGDAG+ AFP    + HP NNNPFGS
Sbjct: 545 PFGDAGFGAFPAPNPAPHPQNNNPFGS 571


>ref|XP_003531147.1| PREDICTED: putative clathrin assembly protein At2g01600-like
           isoform 2 [Glycine max]
          Length = 567

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/87 (45%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
 Frame = +2

Query: 2   PNPFEVHDPFALSSNIXXXXXXXXXXXXXXXXXX------FGXXXXXXXXXXHMLMNPAN 163
           PNPFE+ DPFALSS+I                        F           HMLMNPAN
Sbjct: 477 PNPFEMQDPFALSSSIPPPPAVQLAAMQQQANPFGPYQQPFQPQPQPQQQQHHMLMNPAN 536

Query: 164 PFGDAGYQAFPVNTVSHHPHNNNPFGS 244
           PFGDAG+ AFP    + HP NNNPFGS
Sbjct: 537 PFGDAGFGAFPAPNPAPHPQNNNPFGS 563


>ref|XP_003531146.1| PREDICTED: putative clathrin assembly protein At2g01600-like
           isoform 1 [Glycine max]
          Length = 568

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/87 (45%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
 Frame = +2

Query: 2   PNPFEVHDPFALSSNIXXXXXXXXXXXXXXXXXX------FGXXXXXXXXXXHMLMNPAN 163
           PNPFE+ DPFALSS+I                        F           HMLMNPAN
Sbjct: 478 PNPFEMQDPFALSSSIPPPPAVQLAAMQQQANPFGPYQQPFQPQPQPQQQQHHMLMNPAN 537

Query: 164 PFGDAGYQAFPVNTVSHHPHNNNPFGS 244
           PFGDAG+ AFP    + HP NNNPFGS
Sbjct: 538 PFGDAGFGAFPAPNPAPHPQNNNPFGS 564


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