BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012798
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   541   e-151
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   534   e-149
ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago trunca...   517   e-144
ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   513   e-143
ref|XP_002298305.1| hypothetical protein POPTRDRAFT_172231 [Popu...   421   e-115

>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1764

 Score =  541 bits (1394), Expect = e-151
 Identities = 270/336 (80%), Positives = 294/336 (87%), Gaps = 1/336 (0%)
 Frame = +3

Query: 3    ELQHHETFLPRAPNLRDRANALLEQELAAHGVKNAYSKVGRKTSKKEREHFVDISLTRGQ 182
            ELQHHETFLPRAPNL+DRANALLEQELA  GVKNA S+VGRK SKKERE+ ++ISL RGQ
Sbjct: 1435 ELQHHETFLPRAPNLKDRANALLEQELAVLGVKNANSRVGRKPSKKERENMINISLLRGQ 1494

Query: 183  EKKKKMGSYTINVQMRKDKLQKPT-VEPVAKEEGEMSDDEEVYEQFKEVKWMEWCQDVMI 359
            EKKKK  S  +NVQMRKD+ QKP  VE + KEEGEMSD+EEVYEQFKEVKWMEWCQDVM+
Sbjct: 1495 EKKKKSSS--VNVQMRKDRFQKPQKVESIVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMV 1552

Query: 360  EEMKTLKRLHKLQTTSANLPKEKVLSKIRSYLQLLGRRIDQIVSEHEVEPYKQDRMTMRL 539
            EEMKTLKRLH+LQ TSANLPKEKVLSKIR+YLQLLGRRIDQIV EHE EPYKQDRMT+RL
Sbjct: 1553 EEMKTLKRLHRLQQTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHEQEPYKQDRMTVRL 1612

Query: 540  WKYVSTFSHLSGERLHQIYSKLKLEQNVAGVGPSHGNGSMSGPFSRNGNPNHSYPFSRHM 719
            WKYVSTFSHLSGERLHQIYSKL+ EQN AGVGPSH NGS+S  FSRNGN     PF RHM
Sbjct: 1613 WKYVSTFSHLSGERLHQIYSKLRQEQNEAGVGPSHANGSVSVSFSRNGN-----PFHRHM 1667

Query: 720  ERQRGYKNVTTYQMPEPTNNTGMSEAWKRRRRAESNGHFQGQPPPQRIMSNGTQILDPSS 899
            ERQRG KN+  YQMPEP +NTG SEAWKRRRR ES+ HFQGQPPPQR +SNG +I DP+S
Sbjct: 1668 ERQRGLKNMAPYQMPEPVDNTGKSEAWKRRRRTESDNHFQGQPPPQRTLSNGIRITDPNS 1727

Query: 900  LGILGAGPSDKRFVSEKPFKTRPGGIPSRQEFSSGI 1007
            LGILGAGPSDKRF SEKP++T+PGG PSRQ FSSGI
Sbjct: 1728 LGILGAGPSDKRFASEKPYRTQPGGFPSRQGFSSGI 1763


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score =  534 bits (1375), Expect = e-149
 Identities = 267/336 (79%), Positives = 293/336 (87%), Gaps = 1/336 (0%)
 Frame = +3

Query: 3    ELQHHETFLPRAPNLRDRANALLEQELAAHGVKNAYSKVGRKTSKKEREHFVDISLTRGQ 182
            ELQHHETFLPRAPNL+DRANALLEQELA  GVKNA S+VGRK SKKERE+ +++SL RGQ
Sbjct: 1438 ELQHHETFLPRAPNLKDRANALLEQELAVLGVKNANSRVGRKPSKKERENMINLSLLRGQ 1497

Query: 183  EKKKKMGSYTINVQMRKDKLQKPT-VEPVAKEEGEMSDDEEVYEQFKEVKWMEWCQDVMI 359
            EKKKK  S  +NVQMRKD+ QKP  VE + KEEGEMSD+EEVYEQFKEVKWMEWCQDVM+
Sbjct: 1498 EKKKKSSS--VNVQMRKDRFQKPQKVESIVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMV 1555

Query: 360  EEMKTLKRLHKLQTTSANLPKEKVLSKIRSYLQLLGRRIDQIVSEHEVEPYKQDRMTMRL 539
            EEMKTLKRLH+LQ TSANLPKEKVLSKIR+YLQLLGRRIDQIV EHE EPYKQDRMT+RL
Sbjct: 1556 EEMKTLKRLHRLQQTSANLPKEKVLSKIRNYLQLLGRRIDQIVLEHEQEPYKQDRMTVRL 1615

Query: 540  WKYVSTFSHLSGERLHQIYSKLKLEQNVAGVGPSHGNGSMSGPFSRNGNPNHSYPFSRHM 719
            WKYVSTFSHLSGERLHQIYSKL+ EQ+ A VGPSH NGS+S  FSRNGN     PF  HM
Sbjct: 1616 WKYVSTFSHLSGERLHQIYSKLRQEQDEAEVGPSHTNGSVSVSFSRNGN-----PFRFHM 1670

Query: 720  ERQRGYKNVTTYQMPEPTNNTGMSEAWKRRRRAESNGHFQGQPPPQRIMSNGTQILDPSS 899
            ERQRG KN+ TYQMPEP +NTG SEAWKRRRR ES+ HFQGQPPPQR +SNG +I DP+S
Sbjct: 1671 ERQRGLKNMATYQMPEPVDNTGKSEAWKRRRRTESDNHFQGQPPPQRTVSNGVRIADPNS 1730

Query: 900  LGILGAGPSDKRFVSEKPFKTRPGGIPSRQEFSSGI 1007
            LGILGAGPSDKRF SEKP++T+PGG PSRQ FSSGI
Sbjct: 1731 LGILGAGPSDKRFASEKPYRTQPGGFPSRQGFSSGI 1766


>ref|XP_003600162.1| DNA-directed RNA polymerase [Medicago truncatula]
            gi|355489210|gb|AES70413.1| DNA-directed RNA polymerase
            [Medicago truncatula]
          Length = 2083

 Score =  517 bits (1331), Expect = e-144
 Identities = 266/340 (78%), Positives = 293/340 (86%), Gaps = 4/340 (1%)
 Frame = +3

Query: 3    ELQHHETFLPRAPNLRDRANALLEQELAAHGVKNAYSKVGRKTSKKERE---HFVDISLT 173
            ELQHHETFLPRAPNLRDRANALLEQELA  GVKNA SKVGRKTSKKERE   H VDISL+
Sbjct: 1747 ELQHHETFLPRAPNLRDRANALLEQELAVLGVKNASSKVGRKTSKKEREEREHLVDISLS 1806

Query: 174  RGQEKKKKMGSYTINVQMRKDKLQKP-TVEPVAKEEGEMSDDEEVYEQFKEVKWMEWCQD 350
            RGQEKKK +GS  +NVQMRKD+LQKP  VEP+ KEEGEMSDD++VYEQFKE KW EWCQD
Sbjct: 1807 RGQEKKKNIGSSKVNVQMRKDRLQKPLNVEPIVKEEGEMSDDDDVYEQFKEGKWKEWCQD 1866

Query: 351  VMIEEMKTLKRLHKLQTTSANLPKEKVLSKIRSYLQLLGRRIDQIVSEHEVEPYKQDRMT 530
            +M+EEMKTLKRLH+LQTTSA+LPKEKVLSKIR+YLQLLGRRIDQIVSE E EP+KQDRMT
Sbjct: 1867 LMVEEMKTLKRLHRLQTTSASLPKEKVLSKIRNYLQLLGRRIDQIVSEQEDEPHKQDRMT 1926

Query: 531  MRLWKYVSTFSHLSGERLHQIYSKLKLEQNVAGVGPSHGNGSMSGPFSRNGNPNHSYPFS 710
             RLWKYVSTFSHLSGERLHQIYSKLKLEQN  GVG S  NGS+SGPFSRNGNPN S+P  
Sbjct: 1927 TRLWKYVSTFSHLSGERLHQIYSKLKLEQNAVGVGSSLPNGSVSGPFSRNGNPNSSFP-- 1984

Query: 711  RHMERQRGYKNVTTYQMPEPTNNTGMSEAWKRRRRAESNGHFQGQPPPQRIMSNGTQILD 890
            R MERQ  ++NVT + M E T +TGMSEAWKRRRRAE++G FQGQPPPQRI SNG + LD
Sbjct: 1985 RPMERQTRFQNVTAHPMREQTYDTGMSEAWKRRRRAENDGCFQGQPPPQRITSNGIRPLD 2044

Query: 891  PSSLGILGAGPSDKRFVSEKPFKTRPGGIPSRQEFSSGID 1010
            P+SLGILGAGPS + F  EK  KT+P G PSRQEFS G++
Sbjct: 2045 PNSLGILGAGPS-QCFSGEKLLKTQPAGSPSRQEFSLGVE 2083


>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355518633|gb|AET00257.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1739

 Score =  513 bits (1320), Expect = e-143
 Identities = 262/334 (78%), Positives = 285/334 (85%), Gaps = 2/334 (0%)
 Frame = +3

Query: 3    ELQHHETFLPRAPNLRDRANALLEQELAAHGVKNAYSKVGRKTSKKEREHFVDISLTRGQ 182
            ELQ+HETFLPRAPNLRDR NALLEQEL   GVKNA S+V RK SKKE+EH ++ISL  GQ
Sbjct: 1420 ELQNHETFLPRAPNLRDRTNALLEQELVVLGVKNANSRVARKPSKKEKEHMMNISLLHGQ 1479

Query: 183  EKKKKMGSYTINVQMRKDKLQKPT-VEPVAKEEGEMSDDEEVYEQFKEVKWMEWCQDVMI 359
            EKKKK+GS  +NVQMRKD+ QKP  VEP+ KEEGEMSD+EEVYEQFKEVKWMEWCQDVM+
Sbjct: 1480 EKKKKLGS--VNVQMRKDRFQKPRKVEPIVKEEGEMSDNEEVYEQFKEVKWMEWCQDVMV 1537

Query: 360  EEMKTLKRLHKLQTTSANLPKEKVLSKIRSYLQLLGRRIDQIVSEHEVEPYKQDRMTMRL 539
            EEMKTLKRLH+LQTTSANLPKEKVLSKIR+YLQLLGRRIDQIVSE+EVEPYKQDRMT+RL
Sbjct: 1538 EEMKTLKRLHRLQTTSANLPKEKVLSKIRNYLQLLGRRIDQIVSENEVEPYKQDRMTVRL 1597

Query: 540  WKYVSTFSHLSGERLHQIYSKLKLEQ-NVAGVGPSHGNGSMSGPFSRNGNPNHSYPFSRH 716
            WKYVSTFSHLSGERLHQIYSKLK EQ + +GVGP       S  FSRNGN     PF RH
Sbjct: 1598 WKYVSTFSHLSGERLHQIYSKLKQEQEDDSGVGP-------SASFSRNGN-----PFHRH 1645

Query: 717  MERQRGYKNVTTYQMPEPTNNTGMSEAWKRRRRAESNGHFQGQPPPQRIMSNGTQILDPS 896
            MERQRG+KN+  YQM EP NNTG SEAWKRRRRAES  HFQGQPPPQR  SNG +I DP+
Sbjct: 1646 MERQRGFKNMANYQMSEPDNNTGKSEAWKRRRRAESEDHFQGQPPPQRTSSNGIRITDPN 1705

Query: 897  SLGILGAGPSDKRFVSEKPFKTRPGGIPSRQEFS 998
            SLGILGAGPSDKR VSEKPF+T+PGG PS Q FS
Sbjct: 1706 SLGILGAGPSDKRLVSEKPFRTQPGGFPSSQGFS 1739


>ref|XP_002298305.1| hypothetical protein POPTRDRAFT_172231 [Populus trichocarpa]
            gi|222845563|gb|EEE83110.1| hypothetical protein
            POPTRDRAFT_172231 [Populus trichocarpa]
          Length = 419

 Score =  421 bits (1082), Expect = e-115
 Identities = 218/324 (67%), Positives = 261/324 (80%), Gaps = 5/324 (1%)
 Frame = +3

Query: 3    ELQHHETFLPRAPNLRDRANALLEQELAAHGVKNAYSKVGRKTSKKEREHFVDISLTRGQ 182
            ELQHHETFLPRAPNL++RANALLE ELAA G KNA +K GRK SKKERE+ ++ S  RG+
Sbjct: 96   ELQHHETFLPRAPNLKERANALLEMELAAVGGKNANAKGGRKASKKERENVLNFSAARGR 155

Query: 183  EKKKKMGSYTINVQMRKDKLQKP-TVEPVAKEEGEMSDDEEVYEQFKEVKWMEWCQDVMI 359
            +KK K GS  ++VQ  K++ Q+P  VE +AKEEGEMSD+EE+ EQFKEVKWMEWC++VM 
Sbjct: 156  DKKVKPGSVMVSVQTNKNRPQRPHRVEQLAKEEGEMSDNEELCEQFKEVKWMEWCEEVMF 215

Query: 360  EEMKTLKRLHKLQTTSANLPKEKVLSKIRSYLQLLGRRIDQIVSEHEVEPYKQDRMTMRL 539
            +E+KTLKRL+KLQTTSA+LPKEKVLSKIR+YLQL+GRRIDQIV E+E E YKQDRMTMRL
Sbjct: 216  DEIKTLKRLNKLQTTSADLPKEKVLSKIRNYLQLIGRRIDQIVFEYEAELYKQDRMTMRL 275

Query: 540  WKYVSTFSHLSGERLHQIYSKLKLEQNV-AGVGPSHGNGSMSGPFSRNGNPNHSYPFSRH 716
            WKYVSTFS+LSGERL QIYSKLK EQ   AGVGPSH NG+  G   ++G+ N+  P SR+
Sbjct: 276  WKYVSTFSNLSGERLRQIYSKLKQEQEEDAGVGPSHANGAAYGSVDKDGDSNNFPPLSRN 335

Query: 717  MERQRGYKNVTTYQMPEPTN---NTGMSEAWKRRRRAESNGHFQGQPPPQRIMSNGTQIL 887
             ERQRGYKN + Y M EP N   + G  EAWKRRRRAE++   Q QPP QR +SNGT++ 
Sbjct: 336  FERQRGYKNASAYPMSEPINRGHDAGKFEAWKRRRRAEADIQPQFQPPLQRPISNGTRLS 395

Query: 888  DPSSLGILGAGPSDKRFVSEKPFK 959
            DP+SLGILGAGP+D R   E+PF+
Sbjct: 396  DPNSLGILGAGPADNRPFIERPFR 419