BLASTX nr result

ID: Glycyrrhiza24_contig00012776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012776
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623963.1| Mediator of RNA polymerase II transcription ...   215   1e-53
ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806...   214   1e-53
ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782...   190   4e-46
ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781...   188   1e-45
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...   164   2e-38

>ref|XP_003623963.1| Mediator of RNA polymerase II transcription subunit [Medicago
            truncatula] gi|87240976|gb|ABD32834.1| 2-oxo acid
            dehydrogenase, lipoyl-binding site [Medicago truncatula]
            gi|355498978|gb|AES80181.1| Mediator of RNA polymerase II
            transcription subunit [Medicago truncatula]
          Length = 2270

 Score =  215 bits (547), Expect = 1e-53
 Identities = 110/131 (83%), Positives = 115/131 (87%)
 Frame = -1

Query: 811  RIQAAMPVLPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTA 632
            RIQAAMPVLPPSTRCSFSCQPPSV+ +SLA LQ NI NS  NS S+   QR+PVP SRTA
Sbjct: 2143 RIQAAMPVLPPSTRCSFSCQPPSVANSSLASLQSNIKNSGSNSGSLATSQRSPVPLSRTA 2202

Query: 631  ASGKSKQQDNDFEVDPWTLLEDGAGSCPSASNTAIIGSGDRVNIRATSWLKGAVRVRRTD 452
            ASGKSKQQDNDFEVDPWTLLEDGAGSCPSASN   +GSGDRVNIRA SWLKGAVRVRRTD
Sbjct: 2203 ASGKSKQQDNDFEVDPWTLLEDGAGSCPSASN---VGSGDRVNIRAASWLKGAVRVRRTD 2259

Query: 451  LTYVGAVDEDS 419
            LTYVG VDEDS
Sbjct: 2260 LTYVGPVDEDS 2270


>ref|XP_003552395.1| PREDICTED: uncharacterized protein LOC100806985 [Glycine max]
          Length = 2279

 Score =  214 bits (546), Expect = 1e-53
 Identities = 105/131 (80%), Positives = 112/131 (85%)
 Frame = -1

Query: 811  RIQAAMPVLPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTA 632
            RIQAAMP+LPPS RCSFSCQ P+V  ++L  LQPN TNS FNS S  +PQRN VP SRT 
Sbjct: 2149 RIQAAMPLLPPSIRCSFSCQLPTVPASALVSLQPNTTNSGFNSGSSTVPQRNLVPSSRTT 2208

Query: 631  ASGKSKQQDNDFEVDPWTLLEDGAGSCPSASNTAIIGSGDRVNIRATSWLKGAVRVRRTD 452
             SGKSKQ DND +VDPWTLLEDGAGSCPSASNT IIGSGDRVNIRA SWLKGAVRVRRTD
Sbjct: 2209 TSGKSKQHDNDLDVDPWTLLEDGAGSCPSASNTDIIGSGDRVNIRAASWLKGAVRVRRTD 2268

Query: 451  LTYVGAVDEDS 419
            LTYVGAVDED+
Sbjct: 2269 LTYVGAVDEDN 2279


>ref|XP_003529940.1| PREDICTED: uncharacterized protein LOC100782672 [Glycine max]
          Length = 2235

 Score =  190 bits (482), Expect = 4e-46
 Identities = 100/131 (76%), Positives = 107/131 (81%), Gaps = 2/131 (1%)
 Frame = -1

Query: 808  IQAAMPVLPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTA- 632
            IQAAMP+L PS RCS SCQPPS+S ++L  LQP+ITN   NSSS  IPQRNPV  SR A 
Sbjct: 2105 IQAAMPILIPSMRCSLSCQPPSISNSALVCLQPSITNPGSNSSSSTIPQRNPVL-SRVAS 2163

Query: 631  -ASGKSKQQDNDFEVDPWTLLEDGAGSCPSASNTAIIGSGDRVNIRATSWLKGAVRVRRT 455
             ASGKSKQQDND E+DPWTLLEDG GS  SA NTA IGSGD  NIRATSWLKGAVRVRRT
Sbjct: 2164 NASGKSKQQDNDLEIDPWTLLEDGTGSYSSAGNTASIGSGDHANIRATSWLKGAVRVRRT 2223

Query: 454  DLTYVGAVDED 422
            DLTYVGAVD+D
Sbjct: 2224 DLTYVGAVDDD 2234


>ref|XP_003521885.1| PREDICTED: uncharacterized protein LOC100781696 [Glycine max]
          Length = 2240

 Score =  188 bits (478), Expect = 1e-45
 Identities = 102/133 (76%), Positives = 108/133 (81%), Gaps = 2/133 (1%)
 Frame = -1

Query: 811  RIQAAMPVLPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTA 632
            RIQAAMP+L PS RCS SCQPPSVS ++L  LQP+ITN   NSSS  IPQRN V  SR A
Sbjct: 2109 RIQAAMPMLIPSMRCSLSCQPPSVSNSALVCLQPSITNPGSNSSSSTIPQRNSVL-SRVA 2167

Query: 631  --ASGKSKQQDNDFEVDPWTLLEDGAGSCPSASNTAIIGSGDRVNIRATSWLKGAVRVRR 458
              ASGKSK QDND E+DPWTLLEDGAGS PSA NTA I SGD  NIRATSWLKGAVRVRR
Sbjct: 2168 SNASGKSKLQDNDLEIDPWTLLEDGAGSYPSAGNTASIVSGDHANIRATSWLKGAVRVRR 2227

Query: 457  TDLTYVGAVDEDS 419
            TDLTYVGAVD+DS
Sbjct: 2228 TDLTYVGAVDDDS 2240


>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score =  164 bits (416), Expect = 2e-38
 Identities = 83/135 (61%), Positives = 101/135 (74%), Gaps = 4/135 (2%)
 Frame = -1

Query: 811  RIQAAMPVLPPSTRCSFSCQPPSVSVTSLAPLQPNITNSRFNSSSVNIPQRNPVPPSRTA 632
            RIQAAMP+L PS RCS SCQPPSVS  ++A LQP+++   F+  + N  QRN    S   
Sbjct: 2141 RIQAAMPILVPSGRCSISCQPPSVSSAAVASLQPSLSFPAFHPGNTNQSQRNS---SSLV 2197

Query: 631  ASGKSK----QQDNDFEVDPWTLLEDGAGSCPSASNTAIIGSGDRVNIRATSWLKGAVRV 464
              GK K    QQD+D E+DPWTLLEDGAG+ PS+ NTA+IGSGD  N+RA+SWL+G VRV
Sbjct: 2198 RPGKLKNMPLQQDHDIEIDPWTLLEDGAGAGPSSGNTAVIGSGDHANLRASSWLRGTVRV 2257

Query: 463  RRTDLTYVGAVDEDS 419
            RRTDLTY+GAVD+DS
Sbjct: 2258 RRTDLTYIGAVDDDS 2272


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