BLASTX nr result

ID: Glycyrrhiza24_contig00012705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012705
         (1398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g...   481   e-133
ref|XP_003527575.1| PREDICTED: KH domain-containing protein At5g...   476   e-132
ref|XP_003598315.1| KH domain-containing protein [Medicago trunc...   461   e-127
ref|XP_002532938.1| nucleic acid binding protein, putative [Rici...   454   e-125
ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|2...   450   e-124

>ref|XP_003522828.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine
           max]
          Length = 291

 Score =  481 bits (1238), Expect = e-133
 Identities = 249/291 (85%), Positives = 257/291 (88%), Gaps = 8/291 (2%)
 Frame = +1

Query: 148 GAGRYMAFXXXXXXXXXXHLSGLRSAASTALAEQDKYLTELLGERQKIGPFMAVLPHCYR 327
           GAGRYMAF          HLSGLRS   T L++ DKYL ELLGER K+ PFMAVLPHC+R
Sbjct: 6   GAGRYMAFPPSPSAPPSPHLSGLRS---TPLSDPDKYLAELLGERNKLSPFMAVLPHCFR 62

Query: 328 LLNQEILRVTTLLGNAS--------HASPLATGGIFSNGGGDVNGWASRFQSEMPGMLQS 483
           L NQEILRVTTL+GNAS        HASPLATGGIFSNGG DVNGWASRFQSE P +LQS
Sbjct: 63  LFNQEILRVTTLMGNASVLGQSGLEHASPLATGGIFSNGGADVNGWASRFQSERPSLLQS 122

Query: 484 SSTPNWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVL 663
           SST NWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVL
Sbjct: 123 SSTQNWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVL 182

Query: 664 IRGRGSIKDPTREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPV 843
           IRGRGSIKDP REEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPV
Sbjct: 183 IRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPV 242

Query: 844 DESQDFFKKQQLRELALLNGTLREEGSPMSGSVSPFHNNNSLGMKRAKTRG 996
           DESQDF+KKQQLRELA+LNGTLREEGSPMSGSVSPFH  NSLGMKRAKTRG
Sbjct: 243 DESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFH--NSLGMKRAKTRG 291


>ref|XP_003527575.1| PREDICTED: KH domain-containing protein At5g56140-like [Glycine
           max]
          Length = 292

 Score =  476 bits (1224), Expect = e-132
 Identities = 246/291 (84%), Positives = 257/291 (88%), Gaps = 8/291 (2%)
 Frame = +1

Query: 148 GAGRYMAFXXXXXXXXXXHLSGLRSAASTALAEQDKYLTELLGERQKIGPFMAVLPHCYR 327
           GA RYMAF          HLSG  +  ST L++ DKYLTELLGER K+ PFMAVLPHC+R
Sbjct: 6   GAARYMAFPPSPSAPPSPHLSG--ALRSTPLSDPDKYLTELLGERNKLSPFMAVLPHCFR 63

Query: 328 LLNQEILRVTTLLGNAS--------HASPLATGGIFSNGGGDVNGWASRFQSEMPGMLQS 483
           LLNQEILRVTTL+GNAS        HASPLATGGIFSNGG DVNGWASRFQSE P +LQS
Sbjct: 64  LLNQEILRVTTLMGNASVLGQSGLEHASPLATGGIFSNGGADVNGWASRFQSERPSLLQS 123

Query: 484 SSTPNWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVL 663
           SST +WLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVL
Sbjct: 124 SSTQSWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVL 183

Query: 664 IRGRGSIKDPTREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPV 843
           IRGRGSIKDP REEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAR+ILEDLLKPV
Sbjct: 184 IRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQARDILEDLLKPV 243

Query: 844 DESQDFFKKQQLRELALLNGTLREEGSPMSGSVSPFHNNNSLGMKRAKTRG 996
           DESQDF+KKQQLRELA+LNGTLREEGSPMSGSVSPFH  NSLGMKRAKTRG
Sbjct: 244 DESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFH--NSLGMKRAKTRG 292


>ref|XP_003598315.1| KH domain-containing protein [Medicago truncatula]
           gi|355487363|gb|AES68566.1| KH domain-containing protein
           [Medicago truncatula]
          Length = 293

 Score =  461 bits (1187), Expect = e-127
 Identities = 233/291 (80%), Positives = 255/291 (87%), Gaps = 8/291 (2%)
 Frame = +1

Query: 148 GAGRYMAFXXXXXXXXXXHLSGLRSAASTALAEQDKYLTELLGERQKIGPFMAVLPHCYR 327
           GAGRYMAF          HLSGLRS AS+ ++E D+YL+ELLGERQKI PFMAVLPHCYR
Sbjct: 6   GAGRYMAFPPSPSQSLP-HLSGLRSPASSVISEHDQYLSELLGERQKISPFMAVLPHCYR 64

Query: 328 LLNQEILRVTTLLGNAS--------HASPLATGGIFSNGGGDVNGWASRFQSEMPGMLQS 483
           LLNQEILRVTT+LGNAS        H SPLA GG+FS GG D NGW SRFQSEMP ++QS
Sbjct: 65  LLNQEILRVTTILGNASVLGQSGLEHGSPLAAGGMFSKGGLDPNGWVSRFQSEMPSLIQS 124

Query: 484 SSTPNWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVL 663
           S TP+WLSPQGSSSG++VKKT+RVDIPVD++PNFNFVGRLLGPRGNSLKRVEA+TECRVL
Sbjct: 125 SPTPSWLSPQGSSSGLLVKKTIRVDIPVDSFPNFNFVGRLLGPRGNSLKRVEANTECRVL 184

Query: 664 IRGRGSIKDPTREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPV 843
           IRGRGSIKD  REEMMRGKPGYEHLNEPLHILVEAELP EI+DARLMQAREILEDLL+PV
Sbjct: 185 IRGRGSIKDTAREEMMRGKPGYEHLNEPLHILVEAELPAEIIDARLMQAREILEDLLRPV 244

Query: 844 DESQDFFKKQQLRELALLNGTLREEGSPMSGSVSPFHNNNSLGMKRAKTRG 996
           +ES DF+KKQQLRELA++NGTLREEGSPMSGSVSPFH  NSLGMKRAKTRG
Sbjct: 245 EESHDFYKKQQLRELAMINGTLREEGSPMSGSVSPFH--NSLGMKRAKTRG 293


>ref|XP_002532938.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223527289|gb|EEF29442.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 300

 Score =  454 bits (1168), Expect = e-125
 Identities = 232/291 (79%), Positives = 253/291 (86%), Gaps = 8/291 (2%)
 Frame = +1

Query: 148 GAGRYMAFXXXXXXXXXXHLSGLRSAASTALAEQDKYLTELLGERQKIGPFMAVLPHCYR 327
           G GR+MA+          HLSGLRSA+S AL EQ+KYL+ELL ER K+ PFM VLPH YR
Sbjct: 13  GGGRFMAYSPSPSAPHSPHLSGLRSASS-ALVEQEKYLSELLAERHKLSPFMPVLPHTYR 71

Query: 328 LLNQEILRVTTLLGNAS--------HASPLATGGIFSNGGGDVNGWASRFQSEMPGMLQS 483
           LL+QEILRVTTLLGNAS        HASPLA+GG+FSNGG D NGWASRFQSEM G++Q 
Sbjct: 72  LLSQEILRVTTLLGNASVLGQSGLEHASPLASGGMFSNGGADANGWASRFQSEMSGLIQP 131

Query: 484 SSTPNWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECRVL 663
           SS  NWLS QGSSSG+IVK+T+RVDIP++ YP++NFVGRLLGPRGNSLKRVEASTECRVL
Sbjct: 132 SSAQNWLSSQGSSSGLIVKRTIRVDIPIERYPSYNFVGRLLGPRGNSLKRVEASTECRVL 191

Query: 664 IRGRGSIKDPTREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLKPV 843
           IRGRGSIKDP REEMMRGKPGYEHLNEPLHILVEAELPVEIVDAR+ QAREILEDLLKPV
Sbjct: 192 IRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARIAQAREILEDLLKPV 251

Query: 844 DESQDFFKKQQLRELALLNGTLREEGSPMSGSVSPFHNNNSLGMKRAKTRG 996
           DESQDF+KKQQLRELA+LNGTLREEGSPMSGSVSPFH  NSLGMKRAKTRG
Sbjct: 252 DESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFH--NSLGMKRAKTRG 300


>ref|XP_002299073.1| predicted protein [Populus trichocarpa] gi|222846331|gb|EEE83878.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  450 bits (1158), Expect = e-124
 Identities = 235/293 (80%), Positives = 253/293 (86%), Gaps = 10/293 (3%)
 Frame = +1

Query: 148 GAGRYMAFXXXXXXXXXXHLSGLRS-AASTALA-EQDKYLTELLGERQKIGPFMAVLPHC 321
           GAGR+MA+          H+SGLRS AAS+AL  EQ+KYL+ELL ER KI PF+ VLP+ 
Sbjct: 12  GAGRFMAYSPSPSAPHSPHISGLRSSAASSALVVEQEKYLSELLAERHKISPFLPVLPNT 71

Query: 322 YRLLNQEILRVTTLLGNAS--------HASPLATGGIFSNGGGDVNGWASRFQSEMPGML 477
           YRLLNQEILRVTTLLGNAS        HASPLA+GGIFSNG  D NGWASRFQSEM G+L
Sbjct: 72  YRLLNQEILRVTTLLGNASVLGQSGLEHASPLASGGIFSNGAADANGWASRFQSEMSGIL 131

Query: 478 QSSSTPNWLSPQGSSSGIIVKKTVRVDIPVDAYPNFNFVGRLLGPRGNSLKRVEASTECR 657
           Q SS  NWLS QGSSSG+IVK+T+RVDIPVD YPN+NFVGRLLGPRGNSLKRVEASTECR
Sbjct: 132 QPSSAQNWLSSQGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTECR 191

Query: 658 VLIRGRGSIKDPTREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREILEDLLK 837
           VLIRGRGSIKDP RE+MMRGKPGYEHLNEPLHILVE ELPVEIVDARLMQAREILEDLL+
Sbjct: 192 VLIRGRGSIKDPAREDMMRGKPGYEHLNEPLHILVEGELPVEIVDARLMQAREILEDLLR 251

Query: 838 PVDESQDFFKKQQLRELALLNGTLREEGSPMSGSVSPFHNNNSLGMKRAKTRG 996
           PVDESQD++KKQQLRELALLNGT REEGSPMSGSVSPF  NNSLGMKRAKTRG
Sbjct: 252 PVDESQDYYKKQQLRELALLNGTFREEGSPMSGSVSPF--NNSLGMKRAKTRG 302


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