BLASTX nr result

ID: Glycyrrhiza24_contig00012604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012604
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281421.1| PREDICTED: uncharacterized protein LOC100251...    88   6e-16
gb|AFK48577.1| unknown [Medicago truncatula]                           83   2e-14
ref|XP_003618007.1| Zinc finger RNA-binding protein [Medicago tr...    83   2e-14
emb|CAN78532.1| hypothetical protein VITISV_035305 [Vitis vinifera]    80   1e-13
ref|XP_003633858.1| PREDICTED: uncharacterized protein LOC100262...    79   4e-13

>ref|XP_002281421.1| PREDICTED: uncharacterized protein LOC100251937 [Vitis vinifera]
           gi|297733915|emb|CBI15162.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
 Frame = -3

Query: 454 SATTGNAPQHAAIPMIGPQEXXXXXXXXXXXXXXXXXXXXALEM---DIEAKKRKVVEGG 284
           S +   A Q    P+IGP E                     L+    D++ KK+K+VEGG
Sbjct: 321 STSASTAAQVTTNPIIGPMERLDASKGKSTAAVEPGKRPAQLQTQQKDLDIKKQKIVEGG 380

Query: 283 AAEGDVRLCSLCNVVCNSQTVFNDHLTGHKHAAMVKKAGSS 161
           AA G VR C++CNVVCNSQTVFN HL+G KHA+MVKK G S
Sbjct: 381 AAAGAVRACTICNVVCNSQTVFNIHLSGQKHASMVKKLGES 421



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/45 (64%), Positives = 33/45 (73%)
 Frame = -3

Query: 313 AKKRKVVEGGAAEGDVRLCSLCNVVCNSQTVFNDHLTGHKHAAMV 179
           AK+ K+VEGGA    VR C++CNV CNSQ VF  HLTG KHAA V
Sbjct: 208 AKRLKLVEGGAVADSVRTCTICNVACNSQVVFQKHLTGKKHAAQV 252


>gb|AFK48577.1| unknown [Medicago truncatula]
          Length = 532

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = -3

Query: 328 EMDIEAKKRKVVEGGAAEGDVRLCSLCNVVCNSQTVFNDHLTGHKHAAMVKKAGSSAG 155
           E+DIEA+KRK VE GAA  D+++C+LCNVVCNSQ   N HL+ H HAAMVKKAG   G
Sbjct: 475 ELDIEAEKRKAVERGAAVNDIKMCTLCNVVCNSQANLNTHLSDHNHAAMVKKAGLITG 532


>ref|XP_003618007.1| Zinc finger RNA-binding protein [Medicago truncatula]
           gi|355519342|gb|AET00966.1| Zinc finger RNA-binding
           protein [Medicago truncatula]
          Length = 532

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = -3

Query: 328 EMDIEAKKRKVVEGGAAEGDVRLCSLCNVVCNSQTVFNDHLTGHKHAAMVKKAGSSAG 155
           E+DIEA+KRK VE GAA  D+++C+LCNVVCNSQ   N HL+ H HAAMVKKAG   G
Sbjct: 475 ELDIEAEKRKAVERGAAVNDIKMCTLCNVVCNSQANLNTHLSDHNHAAMVKKAGLITG 532


>emb|CAN78532.1| hypothetical protein VITISV_035305 [Vitis vinifera]
          Length = 1164

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 43/94 (45%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
 Frame = -3

Query: 454 SATTGNAPQHAAIPMIGPQEXXXXXXXXXXXXXXXXXXXXALEM---DIEAKKRKVVEGG 284
           S +   A Q    P+IGP E                     L+    D++ KK+K+VEGG
Sbjct: 528 STSASTAAQVTTNPIIGPMERLDASKCKSSAAVEPGKRPAQLQTQQKDLDIKKQKIVEGG 587

Query: 283 AAEGDVRLCSLCNVVCNSQTVFNDHLTGHKHAAM 182
           AA G VR C++CNVVCNSQTVFN HL+G KHAAM
Sbjct: 588 AAAGAVRACTICNVVCNSQTVFNIHLSGQKHAAM 621



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/45 (60%), Positives = 31/45 (68%)
 Frame = -3

Query: 313 AKKRKVVEGGAAEGDVRLCSLCNVVCNSQTVFNDHLTGHKHAAMV 179
           AK+ K+VEGGA    VR C++CNV C SQ VF  HLTG  HAA V
Sbjct: 415 AKRLKLVEGGAVADSVRTCTICNVACXSQVVFQKHLTGKXHAAQV 459


>ref|XP_003633858.1| PREDICTED: uncharacterized protein LOC100262792 [Vitis vinifera]
          Length = 801

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/56 (64%), Positives = 43/56 (76%)
 Frame = -3

Query: 322 DIEAKKRKVVEGGAAEGDVRLCSLCNVVCNSQTVFNDHLTGHKHAAMVKKAGSSAG 155
           D+E K+R++VE GAA   VR CS+CNVVCNS+TVFN HL G KHAAMVKK  +  G
Sbjct: 741 DLETKRRRIVECGAAADAVRTCSICNVVCNSETVFNYHLAGQKHAAMVKKHAAGRG 796


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