BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012578
         (801 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containi...   164   2e-38
ref|XP_003518473.1| PREDICTED: pentatricopeptide repeat-containi...   160   2e-37
ref|XP_003617156.1| Pentatricopeptide repeat-containing protein ...   142   9e-32
ref|XP_003617158.1| Pentatricopeptide repeat-containing protein ...   119   1e-24
ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   111   2e-22

>ref|XP_003545174.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Glycine max]
          Length = 868

 Score =  164 bits (415), Expect = 2e-38
 Identities = 98/181 (54%), Positives = 115/181 (63%), Gaps = 5/181 (2%)
 Frame = +1

Query: 271 MLPLKHVTKHRL--KSLFSPILTLSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIT 444
           MLPLKHVTKHRL  KS  S IL   ++                               I+
Sbjct: 2   MLPLKHVTKHRLRSKSFISSILDPCSDHAPYTSLASSSSSASTSFF------------IS 49

Query: 445 QNDVADSFKTWFTTHHNSS--GGPLLHRIYQILSSSGD-DFSAALTALNLPLSEHFVLQV 615
           QNDVA SFKTWF +         PLL+RI+QILSS  D DFSAAL+AL LPLSE  VL+V
Sbjct: 50  QNDVASSFKTWFASARQQQLPFDPLLNRIHQILSSPDDEDFSAALSALRLPLSERLVLRV 109

Query: 616 LRTLSNHGDILSCLKFFDWAGRQPYFHHTRATFFAIFRVLTRANLKPLVLDFLNAFRSRV 795
           L   +   DIL CLKFFDWAGRQP+FHHTRATF +IF++L RA+LKPLVL+FL+AFR R+
Sbjct: 110 LCHGAARRDILPCLKFFDWAGRQPHFHHTRATFVSIFKILARADLKPLVLEFLDAFRRRI 169

Query: 796 F 798
           F
Sbjct: 170 F 170


>ref|XP_003518473.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Glycine max]
          Length = 872

 Score =  160 bits (406), Expect = 2e-37
 Identities = 95/184 (51%), Positives = 114/184 (61%), Gaps = 8/184 (4%)
 Frame = +1

Query: 271 MLPLKHVTKHRL--KSLFSPILTLSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVIT 444
           MLPLK VTKHRL  KS  S +L    N                              +I+
Sbjct: 2   MLPLKQVTKHRLRSKSFISTVL----NPCSSDHAAYTSLASSSPSQSTSSSSASSSFLIS 57

Query: 445 QNDVADSFKTWFTT----HHNSSGGPLLHRIYQILSSSG--DDFSAALTALNLPLSEHFV 606
           QNDVA SF++WF      H      PLL+RI+QILSS    +DFSAAL+AL LPLSE  V
Sbjct: 58  QNDVASSFRSWFAAARKQHQQLPFDPLLNRIHQILSSPAGEEDFSAALSALRLPLSESLV 117

Query: 607 LQVLRTLSNHGDILSCLKFFDWAGRQPYFHHTRATFFAIFRVLTRANLKPLVLDFLNAFR 786
           L+VLR  +   +IL CLKFFDWAG QP+FHHTRATF AIF++L RA+LKPLVLDFL++FR
Sbjct: 118 LRVLRHGAARRNILPCLKFFDWAGHQPHFHHTRATFVAIFQILARADLKPLVLDFLDSFR 177

Query: 787 SRVF 798
            R+F
Sbjct: 178 RRIF 181


>ref|XP_003617156.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518491|gb|AET00115.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 854

 Score =  142 bits (358), Expect = 9e-32
 Identities = 73/120 (60%), Positives = 91/120 (75%)
 Frame = +1

Query: 439 ITQNDVADSFKTWFTTHHNSSGGPLLHRIYQILSSSGDDFSAALTALNLPLSEHFVLQVL 618
           ITQNDVA +FKTWF  HH     PLL RIYQILSS+ D+FSA+LT+LNLP++  FVL+VL
Sbjct: 49  ITQNDVASTFKTWFQNHHLYHD-PLLLRIYQILSSN-DNFSASLTSLNLPITTSFVLRVL 106

Query: 619 RTLSNHGDILSCLKFFDWAGRQPYFHHTRATFFAIFRVLTRANLKPLVLDFLNAFRSRVF 798
              +++  IL CL+FFDW G QP F+HT+ATF AIFR+L RA L P+V++FL  F  RVF
Sbjct: 107 HYGADNNYILPCLRFFDWVGHQPGFYHTQATFTAIFRILARAKLMPIVIEFLETFGKRVF 166


>ref|XP_003617158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518493|gb|AET00117.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 978

 Score =  119 bits (297), Expect = 1e-24
 Identities = 76/173 (43%), Positives = 96/173 (55%), Gaps = 2/173 (1%)
 Frame = +1

Query: 271 MLPLKHV-TKHRLKSLFSPILTLSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVITQ 447
           MLPLKHV TKH+ K         S                                +  +
Sbjct: 1   MLPLKHVVTKHKAKPKLKHKSLSSTYSSSISLSSIFTNTLHSSKPKPKPKPKPSFPIPDK 60

Query: 448 NDVADSFKTWFTTHHNSSGGPLLHRIYQILSSSGDDFSAALTALNLPLSEHFVLQVLRTL 627
              A +FKTWF T + S+  PLL RI+Q LSS  +DFSA  T+LN+PL+   VL+VL  +
Sbjct: 61  QITATTFKTWFQTSYLSND-PLLLRIHQFLSSK-NDFSALFTSLNIPLTTPLVLRVLHHV 118

Query: 628 SNHGDILSCLKFFDWAGRQPYFHHTRATFFAIFRVL-TRANLKPLVLDFLNAF 783
           S + DI SCLKFFDWAGRQP + HTRATF AIFR+L TRA+L P++ + L  F
Sbjct: 119 SYNNDIQSCLKFFDWAGRQPRYTHTRATFTAIFRMLTTRAHLMPMLFEILERF 171


>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g71210-like [Vitis vinifera]
          Length = 881

 Score =  111 bits (278), Expect = 2e-22
 Identities = 65/113 (57%), Positives = 75/113 (66%), Gaps = 2/113 (1%)
 Frame = +1

Query: 451 DVADSFKTWFTTHHNSSGGPLLHRIYQILSS-SGDDFSAALTALNLPLSEHFVLQVLRTL 627
           DV  SFK WF +  N     L+ +I++ILS    DD  AAL  L LPLSE FVL VL   
Sbjct: 62  DVVLSFKQWFKSPQNIL---LMDQIFRILSDLPPDDADAALGRLRLPLSERFVLDVLA-- 116

Query: 628 SNHG-DILSCLKFFDWAGRQPYFHHTRATFFAIFRVLTRANLKPLVLDFLNAF 783
             HG D+LSCLKFFDWAGRQP FHHTRATF A F++L RA L  L+LDFL  +
Sbjct: 117 --HGSDVLSCLKFFDWAGRQPGFHHTRATFHATFKILARAKLMSLMLDFLQNY 167