BLASTX nr result

ID: Glycyrrhiza24_contig00012570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012570
         (1219 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|35549...   541   e-151
ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]       539   e-151
ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifer...   454   e-125
ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|2...   449   e-124
emb|CAN65470.1| hypothetical protein VITISV_008981 [Vitis vinifera]   445   e-122

>ref|XP_003624561.1| Transportin-3 [Medicago truncatula] gi|355499576|gb|AES80779.1|
            Transportin-3 [Medicago truncatula]
          Length = 1143

 Score =  541 bits (1393), Expect = e-151
 Identities = 263/286 (91%), Positives = 275/286 (96%)
 Frame = -3

Query: 1217 LDWLSTNFVMFQSHECYIRTASIVIEEFGHREDYGPLFVTMFERFTHSTSVMALTSSYIC 1038
            LDWLSTNFV+FQSHECYIRTASIV+EEFGHRE+YGPLFVTMFERFTHSTSVMAL SSYIC
Sbjct: 858  LDWLSTNFVLFQSHECYIRTASIVVEEFGHREEYGPLFVTMFERFTHSTSVMALNSSYIC 917

Query: 1037 DQEPDLVEAYTNFASTFIRSCNKDALSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLS 858
            DQEPDLVEAYTNFASTFIRSCNKD LS CGSLLEVSIQKAAICCTAMHRGAALAAMSYLS
Sbjct: 918  DQEPDLVEAYTNFASTFIRSCNKDVLSVCGSLLEVSIQKAAICCTAMHRGAALAAMSYLS 977

Query: 857  CFLDVGLVSLLEGMNCIIEGSFNTTAIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATI 678
            CFLDVGLVSLLE MNCI EGS NTT IHVISHSGEGLVSNVVYALLGVSAMSRVHKCAT+
Sbjct: 978  CFLDVGLVSLLESMNCIAEGSSNTTTIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATV 1037

Query: 677  LQQLAAICTLSERTTWKAIFCWQTLHGWIQSAVQALPAEYLNHGEAETLVPLWSKALADA 498
            LQQLAAICTLSERT+WK I CWQTL+GW+QSAVQALPAEYLNHGE ETLVPLWSKALA A
Sbjct: 1038 LQQLAAICTLSERTSWKPILCWQTLNGWLQSAVQALPAEYLNHGETETLVPLWSKALAAA 1097

Query: 497  AADYLQSKNSDGVKSDYGHMQGKGGRVLKRLVREFADAHRNIPNLT 360
            A+DYL+SKNS+G+KSD+GHMQGKGGRVLKRLVREFADAHRNIPNLT
Sbjct: 1098 ASDYLESKNSNGLKSDFGHMQGKGGRVLKRLVREFADAHRNIPNLT 1143


>ref|XP_003548799.1| PREDICTED: transportin-3-like [Glycine max]
          Length = 1011

 Score =  539 bits (1389), Expect = e-151
 Identities = 262/286 (91%), Positives = 276/286 (96%)
 Frame = -3

Query: 1217 LDWLSTNFVMFQSHECYIRTASIVIEEFGHREDYGPLFVTMFERFTHSTSVMALTSSYIC 1038
            LDWLSTNFV+FQSHECYIRTASIVIEEFGH E+YG LFVT FERFTH+ SVMALTSSYIC
Sbjct: 726  LDWLSTNFVLFQSHECYIRTASIVIEEFGHLEEYGRLFVTSFERFTHAASVMALTSSYIC 785

Query: 1037 DQEPDLVEAYTNFASTFIRSCNKDALSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLS 858
            DQEPDLVEAYTNFASTFIRSCNKDALSACGSLLE+SIQKAAICCTAMHRGAALAAMSYLS
Sbjct: 786  DQEPDLVEAYTNFASTFIRSCNKDALSACGSLLEISIQKAAICCTAMHRGAALAAMSYLS 845

Query: 857  CFLDVGLVSLLEGMNCIIEGSFNTTAIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATI 678
            CFLDVGLVSLLE MNCI EGSFN TAIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATI
Sbjct: 846  CFLDVGLVSLLECMNCITEGSFNITAIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATI 905

Query: 677  LQQLAAICTLSERTTWKAIFCWQTLHGWIQSAVQALPAEYLNHGEAETLVPLWSKALADA 498
            LQQLAAICTL+ERTTWKAI CWQTLHGW+ +AVQALP+EYLNHGEAE +VPLWSKALADA
Sbjct: 906  LQQLAAICTLTERTTWKAILCWQTLHGWLHAAVQALPSEYLNHGEAEAIVPLWSKALADA 965

Query: 497  AADYLQSKNSDGVKSDYGHMQGKGGRVLKRLVREFADAHRNIPNLT 360
            A+DYL+SKNSDG+KSD+GHMQGKGGRVLKRLVREFAD+HRNIPNLT
Sbjct: 966  ASDYLESKNSDGLKSDFGHMQGKGGRVLKRLVREFADSHRNIPNLT 1011


>ref|XP_002276597.2| PREDICTED: transportin-3-like [Vitis vinifera]
            gi|296082227|emb|CBI21232.3| unnamed protein product
            [Vitis vinifera]
          Length = 1015

 Score =  454 bits (1169), Expect = e-125
 Identities = 221/286 (77%), Positives = 250/286 (87%)
 Frame = -3

Query: 1217 LDWLSTNFVMFQSHECYIRTASIVIEEFGHREDYGPLFVTMFERFTHSTSVMALTSSYIC 1038
            LD LS NFV+FQSHECYIRTAS+V+EEFGH+E+YGPLF++ FERFT++ SVMAL SSYIC
Sbjct: 730  LDCLSKNFVLFQSHECYIRTASVVLEEFGHKEEYGPLFISAFERFTYAASVMALNSSYIC 789

Query: 1037 DQEPDLVEAYTNFASTFIRSCNKDALSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLS 858
            DQEPDLVEAYTNF STF+R   K+ L+A GSLLEVS QKAAICCTAMHRGAALAAMSY+S
Sbjct: 790  DQEPDLVEAYTNFTSTFVRGSPKEVLAASGSLLEVSFQKAAICCTAMHRGAALAAMSYMS 849

Query: 857  CFLDVGLVSLLEGMNCIIEGSFNTTAIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATI 678
            CFL+VGL+SLLE M CI EGSF+  AI VISHSGEGLVSNVVYALLGVSAMSRVHK ATI
Sbjct: 850  CFLEVGLISLLESMTCIPEGSFSAVAIQVISHSGEGLVSNVVYALLGVSAMSRVHKSATI 909

Query: 677  LQQLAAICTLSERTTWKAIFCWQTLHGWIQSAVQALPAEYLNHGEAETLVPLWSKALADA 498
            LQQLAA+C+LSE TT KAI CW++LH W++ AVQALPAEYL  GEAE LVP+W KAL  A
Sbjct: 910  LQQLAAVCSLSEGTTCKAILCWESLHEWLRLAVQALPAEYLKQGEAEVLVPVWLKALGGA 969

Query: 497  AADYLQSKNSDGVKSDYGHMQGKGGRVLKRLVREFADAHRNIPNLT 360
            A DYL+SK  DG K + GHMQGKGG++LKRLVREFAD+HRN+PNLT
Sbjct: 970  ALDYLESKRCDGGKDNRGHMQGKGGQILKRLVREFADSHRNVPNLT 1015


>ref|XP_002321068.1| predicted protein [Populus trichocarpa] gi|222861841|gb|EEE99383.1|
            predicted protein [Populus trichocarpa]
          Length = 1008

 Score =  449 bits (1154), Expect = e-124
 Identities = 213/286 (74%), Positives = 250/286 (87%)
 Frame = -3

Query: 1217 LDWLSTNFVMFQSHECYIRTASIVIEEFGHREDYGPLFVTMFERFTHSTSVMALTSSYIC 1038
            LD LSTNF+ FQSHE YIRTAS+VIEEF H+E++GPLFV  FERFT +TSVM L SSYIC
Sbjct: 723  LDCLSTNFLSFQSHEWYIRTASVVIEEFSHKEEFGPLFVITFERFTQATSVMGLNSSYIC 782

Query: 1037 DQEPDLVEAYTNFASTFIRSCNKDALSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLS 858
            DQEPDLVEAYTNFAST +R  +K+ L+A GSLL+VS QKAAICCTAMHRGAALAAMSYLS
Sbjct: 783  DQEPDLVEAYTNFASTVVRGTHKEVLAASGSLLDVSFQKAAICCTAMHRGAALAAMSYLS 842

Query: 857  CFLDVGLVSLLEGMNCIIEGSFNTTAIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATI 678
            CFL+VGL+SLLE  NCI+EGS++  +I VIS +GEGLVSN+VYALLGVSAMSRVHKCATI
Sbjct: 843  CFLEVGLISLLESKNCILEGSYSAISIQVISRNGEGLVSNLVYALLGVSAMSRVHKCATI 902

Query: 677  LQQLAAICTLSERTTWKAIFCWQTLHGWIQSAVQALPAEYLNHGEAETLVPLWSKALADA 498
            LQQ+A+ C+LSE TTWK + CW++LHGW+ +AVQALP EYL  GEAETLVP+W +AL  A
Sbjct: 903  LQQVASFCSLSETTTWKVVLCWESLHGWLHAAVQALPVEYLKQGEAETLVPVWMEALVGA 962

Query: 497  AADYLQSKNSDGVKSDYGHMQGKGGRVLKRLVREFADAHRNIPNLT 360
            A+DYL SK  +G K++YGHMQGKGGRVLKR++REFAD+HRN+PNLT
Sbjct: 963  ASDYLGSKTFNGEKNNYGHMQGKGGRVLKRIIREFADSHRNVPNLT 1008


>emb|CAN65470.1| hypothetical protein VITISV_008981 [Vitis vinifera]
          Length = 383

 Score =  445 bits (1144), Expect = e-122
 Identities = 217/281 (77%), Positives = 245/281 (87%)
 Frame = -3

Query: 1217 LDWLSTNFVMFQSHECYIRTASIVIEEFGHREDYGPLFVTMFERFTHSTSVMALTSSYIC 1038
            LD LS NFV+FQSHECYIRTAS+V+EEFGH+E+YGPLF++ FERFT++ SVMAL SSYIC
Sbjct: 91   LDCLSKNFVLFQSHECYIRTASVVLEEFGHKEEYGPLFISAFERFTYAASVMALNSSYIC 150

Query: 1037 DQEPDLVEAYTNFASTFIRSCNKDALSACGSLLEVSIQKAAICCTAMHRGAALAAMSYLS 858
            DQEPDLVEAYTNF STF+R   K+ L+A GSLLEVS QKAAICCTAMHRGAALAAMSY+S
Sbjct: 151  DQEPDLVEAYTNFTSTFVRGSPKEVLAASGSLLEVSFQKAAICCTAMHRGAALAAMSYMS 210

Query: 857  CFLDVGLVSLLEGMNCIIEGSFNTTAIHVISHSGEGLVSNVVYALLGVSAMSRVHKCATI 678
            CFL+VGL+SLLE M CI EGSF+  AI VISHSGEGLVSNVVYALLGVSAMSRVHK ATI
Sbjct: 211  CFLEVGLISLLESMTCIPEGSFSAVAIQVISHSGEGLVSNVVYALLGVSAMSRVHKSATI 270

Query: 677  LQQLAAICTLSERTTWKAIFCWQTLHGWIQSAVQALPAEYLNHGEAETLVPLWSKALADA 498
            LQQLAA+C+LSE TT KAI CW++LH W++ AVQALPAEYL  GEAE LVP+W KAL  A
Sbjct: 271  LQQLAAVCSLSEGTTCKAILCWESLHEWLRLAVQALPAEYLKQGEAEVLVPVWLKALGGA 330

Query: 497  AADYLQSKNSDGVKSDYGHMQGKGGRVLKRLVREFADAHRN 375
            A DYL+SK  DG K + GHMQGKGG++LKRLVREFAD+HRN
Sbjct: 331  ALDYLESKRCDGGKDNRGHMQGKGGQILKRLVREFADSHRN 371


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