BLASTX nr result

ID: Glycyrrhiza24_contig00012562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012562
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601589.1| hypothetical protein MTR_3g083320 [Medicago ...    64   1e-08
ref|XP_002306362.1| predicted protein [Populus trichocarpa] gi|2...    55   7e-06

>ref|XP_003601589.1| hypothetical protein MTR_3g083320 [Medicago truncatula]
           gi|355490637|gb|AES71840.1| hypothetical protein
           MTR_3g083320 [Medicago truncatula]
          Length = 104

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/66 (59%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = -3

Query: 541 TAATVPETREDEVTSKR-ISTGEGIRNRNRTHYDASRKGSYTVEGNRTGGRE-RRPKSPA 368
           + ATVPETREDEVTSKR I  G   RNRN+ H +ASR  SY  + N  GGRE RRPK  A
Sbjct: 16  STATVPETREDEVTSKRRIREGTHNRNRNQRHTNASRNRSYKADRNIVGGRERRRPKLSA 75

Query: 367 RVPDNP 350
            V + P
Sbjct: 76  WVLEIP 81


>ref|XP_002306362.1| predicted protein [Populus trichocarpa] gi|222855811|gb|EEE93358.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 55/164 (33%), Positives = 63/164 (38%), Gaps = 3/164 (1%)
 Frame = -3

Query: 547 TTTAATVPETREDEVTSKRISTGEGIRNRNRTHYDASRKGSYTVEGNRTGGRERRPKSPA 368
           TTT  T+ E REDEVTSK+          NR+     RK  YT      G RER  K PA
Sbjct: 222 TTTTTTITEIREDEVTSKK--------RVNRSPAKVHRKRPYT------GDRERVLKYPA 267

Query: 367 RVPDNPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPSCARTVGG-GAARCQLRPPGGS 191
           +                                        RT GG G  R    P    
Sbjct: 268 KTTGQ----------VIRTAAGQRNVGSRGVRSDFGRSPATRTAGGAGRGRAGASPGKAG 317

Query: 190 GRRLPAAAKGKSEE--VVGETNDGVSMEESLENPHVSLECFIFL 65
           GR +    K  SE   V+ +  +G    ESLENP VSLECFIFL
Sbjct: 318 GRSVERKNKEDSENGSVLRQQEEG---NESLENPLVSLECFIFL 358


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