BLASTX nr result

ID: Glycyrrhiza24_contig00012537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012537
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...    97   1e-18
emb|CBI34941.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyr...    93   2e-17
ref|NP_186795.1| methyl-CPG-binding domain 9 [Arabidopsis thalia...    93   3e-17
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...    88   8e-16

>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/72 (65%), Positives = 54/72 (75%)
 Frame = -2

Query: 265  DPNSXXXXXXXXXXXRKDIDSTVPAKRTKVNMLPINELTWPELARRYLLSFLSMDGNLES 86
            DPN            +KD D+ +P K+TK+NMLPINELTWPELARRY+L  LSMDGNL+S
Sbjct: 833  DPNFDSGESKSRRGRKKDADNAIPTKKTKLNMLPINELTWPELARRYILCVLSMDGNLDS 892

Query: 85   AEITARESGKVF 50
            AEIT RESGKVF
Sbjct: 893  AEITIRESGKVF 904


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/72 (65%), Positives = 54/72 (75%)
 Frame = -2

Query: 265 DPNSXXXXXXXXXXXRKDIDSTVPAKRTKVNMLPINELTWPELARRYLLSFLSMDGNLES 86
           DPN            +KD D+ +P K+TK+NMLPINELTWPELARRY+L  LSMDGNL+S
Sbjct: 771 DPNFDSGESKSRRGRKKDADNAIPTKKTKLNMLPINELTWPELARRYILCVLSMDGNLDS 830

Query: 85  AEITARESGKVF 50
           AEIT RESGKVF
Sbjct: 831 AEITIRESGKVF 842


>ref|XP_002884279.1| methyl-CpG-binding domain 9 [Arabidopsis lyrata subsp. lyrata]
            gi|297330119|gb|EFH60538.1| methyl-CpG-binding domain 9
            [Arabidopsis lyrata subsp. lyrata]
          Length = 2183

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 48/72 (66%), Positives = 55/72 (76%)
 Frame = -2

Query: 265  DPNSXXXXXXXXXXXRKDIDSTVPAKRTKVNMLPINELTWPELARRYLLSFLSMDGNLES 86
            DPN            +KD DST+ AKR K++MLP+NE TWPELARRY+LS LSMDGNLES
Sbjct: 904  DPNFDSGESRSRRGRKKD-DSTLSAKRNKLHMLPVNEFTWPELARRYILSLLSMDGNLES 962

Query: 85   AEITARESGKVF 50
            AEI+ARESGKVF
Sbjct: 963  AEISARESGKVF 974


>ref|NP_186795.1| methyl-CPG-binding domain 9 [Arabidopsis thaliana]
            gi|75337201|sp|Q9SGH2.1|MBD9_ARATH RecName:
            Full=Methyl-CpG-binding domain-containing protein 9;
            Short=AtMBD9; Short=MBD09; AltName: Full=Histone acetyl
            tranferase MBD9; AltName: Full=Methyl-CpG-binding protein
            MBD9 gi|6692266|gb|AAF24616.1|AC010870_9 unknown protein
            [Arabidopsis thaliana] gi|332640148|gb|AEE73669.1|
            methyl-CPG-binding domain 9 [Arabidopsis thaliana]
          Length = 2176

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/72 (66%), Positives = 54/72 (75%)
 Frame = -2

Query: 265  DPNSXXXXXXXXXXXRKDIDSTVPAKRTKVNMLPINELTWPELARRYLLSFLSMDGNLES 86
            DPN            +KD DST+ AKR K++MLP+NE TWPELARRY+LS LSMDGNLES
Sbjct: 904  DPNFDSGESRSRRGRKKD-DSTLSAKRNKLHMLPVNEFTWPELARRYILSLLSMDGNLES 962

Query: 85   AEITARESGKVF 50
            AEI ARESGKVF
Sbjct: 963  AEIAARESGKVF 974


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/72 (59%), Positives = 52/72 (72%)
 Frame = -2

Query: 265  DPNSXXXXXXXXXXXRKDIDSTVPAKRTKVNMLPINELTWPELARRYLLSFLSMDGNLES 86
            DPN            +KD+DS+   +R+K N LPIN LTWPELARRY+L+ LSM+GNL+S
Sbjct: 835  DPNFDSGELKSKRGRKKDVDSSTLIRRSKCNTLPINALTWPELARRYILAVLSMEGNLDS 894

Query: 85   AEITARESGKVF 50
             EITARESGKVF
Sbjct: 895  TEITARESGKVF 906


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