BLASTX nr result

ID: Glycyrrhiza24_contig00012479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012479
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-l...   263   5e-68
ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-l...   262   6e-68
ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-l...   257   2e-66
ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communi...   255   7e-66
ref|NP_671857.2| transducin/WD-40 repeat-containing protein [Ara...   253   4e-65

>ref|XP_003539636.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 553

 Score =  263 bits (671), Expect = 5e-68
 Identities = 127/131 (96%), Positives = 131/131 (100%)
 Frame = +3

Query: 45  VTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIQGYLTLRCSLKLAPRIHKIQASFC 224
           VTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEI+GYLTLRCSLKLAPRIHKIQASFC
Sbjct: 369 VTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLAPRIHKIQASFC 428

Query: 225 PLLSLEKGEFIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIGIAWNHGENLLASSDF 404
           PLLSLEKGEFIVAGSEDSNVYFYDLT+PK+TCVNKLQGHRFPV+GIAWNHGENLLASSDF
Sbjct: 429 PLLSLEKGEFIVAGSEDSNVYFYDLTKPKNTCVNKLQGHRFPVMGIAWNHGENLLASSDF 488

Query: 405 YGIVIVWKRER 437
           YGIVIVWKRER
Sbjct: 489 YGIVIVWKRER 499


>ref|XP_003541608.1| PREDICTED: WD repeat-containing protein 13-like [Glycine max]
          Length = 514

 Score =  262 bits (670), Expect = 6e-68
 Identities = 126/132 (95%), Positives = 131/132 (99%)
 Frame = +3

Query: 42  PVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIQGYLTLRCSLKLAPRIHKIQASF 221
           PVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEI+GYLTLRCSLKLAPRIHKIQASF
Sbjct: 376 PVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIKGYLTLRCSLKLAPRIHKIQASF 435

Query: 222 CPLLSLEKGEFIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIGIAWNHGENLLASSD 401
           CPLLSLEKGEFIVAGSEDSNVYFYDLT+PK+TCVNKLQGHRFPV+ IAWNHGENLLASSD
Sbjct: 436 CPLLSLEKGEFIVAGSEDSNVYFYDLTKPKNTCVNKLQGHRFPVMDIAWNHGENLLASSD 495

Query: 402 FYGIVIVWKRER 437
           FYG+VIVWKRER
Sbjct: 496 FYGVVIVWKRER 507


>ref|XP_004150062.1| PREDICTED: WD repeat-containing protein 13-like [Cucumis sativus]
           gi|449519860|ref|XP_004166952.1| PREDICTED: WD
           repeat-containing protein 13-like [Cucumis sativus]
          Length = 490

 Score =  257 bits (657), Expect = 2e-66
 Identities = 121/132 (91%), Positives = 128/132 (96%)
 Frame = +3

Query: 42  PVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIQGYLTLRCSLKLAPRIHKIQASF 221
           PV+TVQYRSFSLLAR PVLLTCTQDGNLSFFS+ALE+QGYLTLRCSLKLAPRIH I+ASF
Sbjct: 357 PVSTVQYRSFSLLARSPVLLTCTQDGNLSFFSIALEVQGYLTLRCSLKLAPRIHSIRASF 416

Query: 222 CPLLSLEKGEFIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIGIAWNHGENLLASSD 401
           CPLLSLEKGE+IVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIG+AWNHGENLLASSD
Sbjct: 417 CPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIGVAWNHGENLLASSD 476

Query: 402 FYGIVIVWKRER 437
           FYG VIVWKR +
Sbjct: 477 FYGTVIVWKRSK 488


>ref|XP_002512961.1| WD-repeat protein, putative [Ricinus communis]
           gi|223547972|gb|EEF49464.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 500

 Score =  255 bits (652), Expect = 7e-66
 Identities = 121/132 (91%), Positives = 127/132 (96%)
 Frame = +3

Query: 42  PVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIQGYLTLRCSLKLAPRIHKIQASF 221
           PVTTVQYRSFSLLA GPVLLTCTQDGNLSFFSVALEIQGYLTLRCSLKLAPR+H I+ASF
Sbjct: 361 PVTTVQYRSFSLLAGGPVLLTCTQDGNLSFFSVALEIQGYLTLRCSLKLAPRVHSIRASF 420

Query: 222 CPLLSLEKGEFIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIGIAWNHGENLLASSD 401
           CPLLSLEKGE+IV GSEDSNVYFYDLTRP+HTCVNKLQGHRFPVIG+AWNHGENLLASSD
Sbjct: 421 CPLLSLEKGEYIVVGSEDSNVYFYDLTRPRHTCVNKLQGHRFPVIGVAWNHGENLLASSD 480

Query: 402 FYGIVIVWKRER 437
            YGIVIVWKR +
Sbjct: 481 LYGIVIVWKRAK 492


>ref|NP_671857.2| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
           gi|111074218|gb|ABH04482.1| At2g16405 [Arabidopsis
           thaliana] gi|330251400|gb|AEC06494.1| transducin/WD-40
           repeat-containing protein [Arabidopsis thaliana]
          Length = 482

 Score =  253 bits (646), Expect = 4e-65
 Identities = 119/132 (90%), Positives = 129/132 (97%)
 Frame = +3

Query: 42  PVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEIQGYLTLRCSLKLAPRIHKIQASF 221
           PVTTV+YRSFSLLA GPVLLTCTQDGNLSFFSVAL+I+GYLTLRCSLKLAPRIH+IQASF
Sbjct: 348 PVTTVKYRSFSLLASGPVLLTCTQDGNLSFFSVALQIKGYLTLRCSLKLAPRIHRIQASF 407

Query: 222 CPLLSLEKGEFIVAGSEDSNVYFYDLTRPKHTCVNKLQGHRFPVIGIAWNHGENLLASSD 401
           CPLLSLEKGE+IVAGSEDSNVYFYDLT+PKHTCVNKLQGHRFPV+ +AWNHGENLLASSD
Sbjct: 408 CPLLSLEKGEYIVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSD 467

Query: 402 FYGIVIVWKRER 437
           FYG+VIVWKR +
Sbjct: 468 FYGVVIVWKRAK 479


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