BLASTX nr result

ID: Glycyrrhiza24_contig00012472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012472
         (966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516729.1| PREDICTED: uncharacterized protein LOC100792...   326   4e-87
ref|XP_003538656.1| PREDICTED: uncharacterized protein LOC100809...   320   3e-85
ref|XP_003630104.1| Transcription factor tfiiib component [Medic...   240   3e-61
ref|XP_003631592.1| PREDICTED: uncharacterized protein LOC100854...   119   1e-24
emb|CBI37684.3| unnamed protein product [Vitis vinifera]              119   1e-24

>ref|XP_003516729.1| PREDICTED: uncharacterized protein LOC100792788 [Glycine max]
          Length = 935

 Score =  326 bits (836), Expect = 4e-87
 Identities = 191/327 (58%), Positives = 217/327 (66%), Gaps = 6/327 (1%)
 Frame = +2

Query: 2    TGKPAPNSFGKKPTEEKIAIPACSSVNSFGACDTTQVQRCPKYHTITTQDSLTFNEAEVL 181
            TGKPA +SF  K  EE    PA SS+NSFG CD TQ QRCP+YHT   QDSLTFNEA VL
Sbjct: 403  TGKPALHSFNGKSGEENFVTPASSSINSFGECDITQAQRCPEYHT--PQDSLTFNEAAVL 460

Query: 182  NEDDTCTNNRRSETEEVADLNPDCLIDNVFDYQSMKSGTDPSSEIPMHEELTNAADSPTL 361
            NED+T ++NRRSETEE+ DLNP C  D+V DYQ MKSG DP+  IP+HEELTNAADSPTL
Sbjct: 461  NEDNTHSSNRRSETEEIVDLNPACAGDDVIDYQFMKSGKDPTG-IPVHEELTNAADSPTL 519

Query: 362  ADFLHQDVTGEKENANERKK------SLRKHGRSSIASEGNKGGKTSRQLREQGTRKPAN 523
            ADFLH DVT EKE++N+RK       SLRK  R  IA E +KG KTSRQLR+Q   KPAN
Sbjct: 520  ADFLHADVTREKEDSNKRKNDGSTSCSLRKK-RRFIAGEEDKGAKTSRQLRKQAAHKPAN 578

Query: 524  NSXXXXXXXXXXXXXXXPPYNSNRXXXXXXXXXXXXXHXXXXXXXXXXXXXXXVAKNGKT 703
            +S               PPYNSN              +               +AK+GKT
Sbjct: 579  SSFNEDVEDNNDLD---PPYNSNGDELQENDDDYEVNYPSRKKRVSKSSQKKSMAKSGKT 635

Query: 704  AQKRKSDNDDSEKTTKKPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLRMKDIILLAE 883
            +QK K   +D EKT ++P KKFSHSTRRKKRCVDKALLEIPEDELD   + +KDIILL E
Sbjct: 636  SQKPKKAYEDLEKT-EEPLKKFSHSTRRKKRCVDKALLEIPEDELDRLRIPIKDIILLEE 694

Query: 884  YRERSAPKKEATTSKTFSTNQSSGDFL 964
            +RER A KKEA TS   STNQS GD L
Sbjct: 695  HRERLA-KKEAMTSNISSTNQSGGDSL 720


>ref|XP_003538656.1| PREDICTED: uncharacterized protein LOC100809837 [Glycine max]
          Length = 710

 Score =  320 bits (820), Expect = 3e-85
 Identities = 181/306 (59%), Positives = 205/306 (66%), Gaps = 6/306 (1%)
 Frame = +2

Query: 2    TGKPAPNSFGKKPTEEKIAIPACSSVNSFGACDTTQVQRCPKYHTITTQDSLTFNEAEVL 181
            TGKPA +SF  K  EE    PA SS+NSFG CDTTQVQRCP+YHT   QDSLTFNEA V 
Sbjct: 394  TGKPALHSFNGKGGEENFVTPASSSINSFGECDTTQVQRCPEYHT--PQDSLTFNEAAVF 451

Query: 182  NEDDTCTNNRRSETEEVADLNPDCLIDNVFDYQSMKSGTDPSSEIPMHEELTNAADSPTL 361
            NEDD  T+NRR ETEE+ DLNP C  D+V DYQSMKSG DP+  IP+HEELTNAADSPTL
Sbjct: 452  NEDDIHTSNRRLETEEIVDLNPACPGDDVIDYQSMKSGEDPTLGIPVHEELTNAADSPTL 511

Query: 362  ADFLHQDVTGEKENANERKK------SLRKHGRSSIASEGNKGGKTSRQLREQGTRKPAN 523
             DFLH DVT EKE++N+RKK      SLRK+ R  IA E +KG KTSRQLR+Q  RKP N
Sbjct: 512  VDFLHADVTREKEDSNKRKKDGSTSCSLRKN-RRCIAGEEDKGAKTSRQLRKQAARKPVN 570

Query: 524  NSXXXXXXXXXXXXXXXPPYNSNRXXXXXXXXXXXXXHXXXXXXXXXXXXXXXVAKNGKT 703
            +S               P YNSN              +               VAK+GKT
Sbjct: 571  SS---LNEDVEDNNDLDPSYNSNGDELQENDDEYEVDYPSRKRRVSNSSQKKPVAKSGKT 627

Query: 704  AQKRKSDNDDSEKTTKKPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLRMKDIILLAE 883
            +QK K  NDD EK T++PPKKFSHSTRR+KRCVDKALLEIPEDELD   + +KDIILL E
Sbjct: 628  SQKPKKANDDLEK-TEEPPKKFSHSTRRRKRCVDKALLEIPEDELDRLNIPIKDIILLEE 686

Query: 884  YRERSA 901
            +RER A
Sbjct: 687  HRERLA 692


>ref|XP_003630104.1| Transcription factor tfiiib component [Medicago truncatula]
            gi|355524126|gb|AET04580.1| Transcription factor tfiiib
            component [Medicago truncatula]
          Length = 837

 Score =  240 bits (613), Expect = 3e-61
 Identities = 153/318 (48%), Positives = 182/318 (57%), Gaps = 3/318 (0%)
 Frame = +2

Query: 17   PNSFGKKPTEEKIAIPACSSVNSFGACDTTQVQRCPKYHTITTQDSLTFNEAEVLNEDDT 196
            P+SFGK   E         S++     D T   +           S   N AE       
Sbjct: 243  PSSFGKSVAENADIFSGLESLDDILNQDATGTAK-------PDLKSFNVNGAEEKFVLPG 295

Query: 197  CTNNRRSETEEVADLNPD--CLIDNVFD-YQSMKSGTDPSSEIPMHEELTNAADSPTLAD 367
                 RSE +E ADLNPD  C IDNV+D YQSMKSG DP+SEIP HE LTN+ DSPTLAD
Sbjct: 296  YDGKSRSEIQEGADLNPDPDCPIDNVYDDYQSMKSGIDPTSEIPRHEGLTNSPDSPTLAD 355

Query: 368  FLHQDVTGEKENANERKKSLRKHGRSSIASEGNKGGKTSRQLREQGTRKPANNSXXXXXX 547
             L QD  GEKE ANERKKSL+KH  SSIA   +KGGK+SR+ R+Q   KP  NS      
Sbjct: 356  LLQQDDAGEKEVANERKKSLKKHKISSIAGVEDKGGKSSRKPRKQAASKPTKNS---LNE 412

Query: 548  XXXXXXXXXPPYNSNRXXXXXXXXXXXXXHXXXXXXXXXXXXXXXVAKNGKTAQKRKSDN 727
                     PPY  +              +               VAK GKT++KRK  N
Sbjct: 413  AVNGDDVLDPPYVIDGDELEENDDDDDVDYSSKKTSASTSSKKKSVAKKGKTSKKRKKAN 472

Query: 728  DDSEKTTKKPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLRMKDIILLAEYRERSAPK 907
            DDSEK T++PPKKF H++RR+KRCVDKALLE   D LD RT+ ++DIIL+AE++ER A K
Sbjct: 473  DDSEKVTEEPPKKFPHASRRRKRCVDKALLE--NDYLDQRTIPIRDIILIAEHKERLA-K 529

Query: 908  KEATTSKTFSTNQSSGDF 961
            KEAT S+T STNQS GDF
Sbjct: 530  KEATPSQTPSTNQSDGDF 547


>ref|XP_003631592.1| PREDICTED: uncharacterized protein LOC100854024 [Vitis vinifera]
          Length = 1053

 Score =  119 bits (298), Expect = 1e-24
 Identities = 100/300 (33%), Positives = 152/300 (50%), Gaps = 22/300 (7%)
 Frame = +2

Query: 125  KYHTITTQDSLTFNEAEVLNEDDTCTNNRR---SETEEV-ADLNPDCLIDNVFDYQSMK- 289
            K HT   + S      + + E  +C+ +     SETE +  D  P      V D+ S++ 
Sbjct: 553  KLHTDKDKPSFDVPHPDTV-ESVSCSQDAHLLPSETEYMDEDSIPAFPAGEVLDFSSVRF 611

Query: 290  ---SGTDPSSEIPMH-EELTNAADSPTLADF-LHQDVTGEK----ENANERKKSL----- 427
               + TDP+ E+P++ ++L  +A+    A   +H    G K    E++  RK+       
Sbjct: 612  SDSASTDPTYELPVNNKDLAKSANLDAAASGDVHSAGAGPKIPGSESSKGRKRKTSTGSV 671

Query: 428  --RKHGRSSIASEGNKGGKTSRQLREQG-TRKPANNSXXXXXXXXXXXXXXXPPYNSNRX 598
              +K  +SS A + N+ GK+SR+LR++  T +  + S               PP NS   
Sbjct: 672  LSQKGQKSSTAVDKNETGKSSRRLRKRILTHELVDESEDEARDNGAKPAE--PPINSVAD 729

Query: 599  XXXXXXXXXXXXHXXXXXXXXXXXXXXXVAKNGKTAQKRKSDNDDSEKTTKKPPKKFSHS 778
                        +               VA+N K  +KRK+ N+  +K+TK+PPKKFSHS
Sbjct: 730  EDRNRDDECKVKNLSRKKRAPRKSMKS-VAENEKPVRKRKNANETGDKSTKEPPKKFSHS 788

Query: 779  TRRKKRCVDKALLEIPEDELDPRTLRMKDIILLAEYRERSAPKKEATTSKTFSTNQSSGD 958
            TRRK+RCVDK LLE PEDE+DP+ L ++D+I+L+E RER    KEA++SK    NQS+ D
Sbjct: 789  TRRKRRCVDKTLLETPEDEIDPQKLPIRDLIVLSEMRERM--NKEASSSKVPLANQSADD 846


>emb|CBI37684.3| unnamed protein product [Vitis vinifera]
          Length = 992

 Score =  119 bits (298), Expect = 1e-24
 Identities = 100/300 (33%), Positives = 152/300 (50%), Gaps = 22/300 (7%)
 Frame = +2

Query: 125  KYHTITTQDSLTFNEAEVLNEDDTCTNNRR---SETEEV-ADLNPDCLIDNVFDYQSMK- 289
            K HT   + S      + + E  +C+ +     SETE +  D  P      V D+ S++ 
Sbjct: 492  KLHTDKDKPSFDVPHPDTV-ESVSCSQDAHLLPSETEYMDEDSIPAFPAGEVLDFSSVRF 550

Query: 290  ---SGTDPSSEIPMH-EELTNAADSPTLADF-LHQDVTGEK----ENANERKKSL----- 427
               + TDP+ E+P++ ++L  +A+    A   +H    G K    E++  RK+       
Sbjct: 551  SDSASTDPTYELPVNNKDLAKSANLDAAASGDVHSAGAGPKIPGSESSKGRKRKTSTGSV 610

Query: 428  --RKHGRSSIASEGNKGGKTSRQLREQG-TRKPANNSXXXXXXXXXXXXXXXPPYNSNRX 598
              +K  +SS A + N+ GK+SR+LR++  T +  + S               PP NS   
Sbjct: 611  LSQKGQKSSTAVDKNETGKSSRRLRKRILTHELVDESEDEARDNGAKPAE--PPINSVAD 668

Query: 599  XXXXXXXXXXXXHXXXXXXXXXXXXXXXVAKNGKTAQKRKSDNDDSEKTTKKPPKKFSHS 778
                        +               VA+N K  +KRK+ N+  +K+TK+PPKKFSHS
Sbjct: 669  EDRNRDDECKVKNLSRKKRAPRKSMKS-VAENEKPVRKRKNANETGDKSTKEPPKKFSHS 727

Query: 779  TRRKKRCVDKALLEIPEDELDPRTLRMKDIILLAEYRERSAPKKEATTSKTFSTNQSSGD 958
            TRRK+RCVDK LLE PEDE+DP+ L ++D+I+L+E RER    KEA++SK    NQS+ D
Sbjct: 728  TRRKRRCVDKTLLETPEDEIDPQKLPIRDLIVLSEMRERM--NKEASSSKVPLANQSADD 785


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