BLASTX nr result

ID: Glycyrrhiza24_contig00012469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012469
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521673.1| PREDICTED: DNA polymerase III polC-type-like...   311   1e-82
ref|XP_003626171.1| DNA polymerase III polC-type [Medicago trunc...   309   3e-82
ref|XP_003554625.1| PREDICTED: DNA polymerase III polC-type-like...   306   3e-81
ref|XP_003535328.1| PREDICTED: DNA polymerase III polC-type-like...   262   5e-68
ref|XP_002512483.1| exonuclease, putative [Ricinus communis] gi|...   244   9e-63

>ref|XP_003521673.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
          Length = 329

 Score =  311 bits (796), Expect = 1e-82
 Identities = 159/186 (85%), Positives = 167/186 (89%)
 Frame = +2

Query: 2   TGLSRENERIIEIALRDLQGGPNSTFQTFVNPQRFVSNSNIHGITTQMVNKPDVPRMEDL 181
           TG SRENERIIEIALRDLQGG NSTFQT VNPQ  V NS+IHGITTQMVNKPDVPRMEDL
Sbjct: 135 TGFSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSHIHGITTQMVNKPDVPRMEDL 194

Query: 182 VPILLHYVRSREKPGGYVLLVAHNARCFDVPFIINELRRCSTKIPPNWLFVDTLPLAREL 361
           +PIL  YVRSREKPGG VL VAHNARCFDVPFII+ELRR S KIPPNWLF+DTLPLAREL
Sbjct: 195 IPILFQYVRSREKPGGDVLFVAHNARCFDVPFIISELRRYSIKIPPNWLFLDTLPLAREL 254

Query: 362 MKSGGTKLSSTSLAALREFYGIKVDGTAHRAMVDVNTLSLVLPRLTFDLKLTLSGLVQKS 541
           MKSGGT LSS+SLAALR+ YGIKVDG+AHRAMVDVNTLSL+L RLT DLKLTLS LV KS
Sbjct: 255 MKSGGTTLSSSSLAALRDLYGIKVDGSAHRAMVDVNTLSLILSRLTSDLKLTLSDLVDKS 314

Query: 542 FRESDI 559
           F ESDI
Sbjct: 315 FTESDI 320


>ref|XP_003626171.1| DNA polymerase III polC-type [Medicago truncatula]
           gi|355501186|gb|AES82389.1| DNA polymerase III polC-type
           [Medicago truncatula]
          Length = 332

 Score =  309 bits (792), Expect = 3e-82
 Identities = 155/186 (83%), Positives = 167/186 (89%)
 Frame = +2

Query: 2   TGLSRENERIIEIALRDLQGGPNSTFQTFVNPQRFVSNSNIHGITTQMVNKPDVPRMEDL 181
           TG SRENERIIEIALRDLQGGPNSTFQTFVNPQR V NS+IHGITTQMV++P VPRMEDL
Sbjct: 137 TGFSRENERIIEIALRDLQGGPNSTFQTFVNPQRSVYNSHIHGITTQMVSRPGVPRMEDL 196

Query: 182 VPILLHYVRSREKPGGYVLLVAHNARCFDVPFIINELRRCSTKIPPNWLFVDTLPLAREL 361
           VPIL HYV+SREKP GYVL V HNAR FDVPFIINE RRCST+IPPNWLFVDTLPLAR+L
Sbjct: 197 VPILFHYVKSREKPRGYVLWVGHNARVFDVPFIINEFRRCSTQIPPNWLFVDTLPLARQL 256

Query: 362 MKSGGTKLSSTSLAALREFYGIKVDGTAHRAMVDVNTLSLVLPRLTFDLKLTLSGLVQKS 541
           MKS GTKL S SL +LR+FY IKVDG AHRAM DVNTLSL+LP+LT DLKLTLSGLV+KS
Sbjct: 257 MKSEGTKLPSVSLDSLRKFYEIKVDGPAHRAMEDVNTLSLILPKLTCDLKLTLSGLVEKS 316

Query: 542 FRESDI 559
           F E+DI
Sbjct: 317 FTEADI 322


>ref|XP_003554625.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
          Length = 329

 Score =  306 bits (784), Expect = 3e-81
 Identities = 156/186 (83%), Positives = 166/186 (89%)
 Frame = +2

Query: 2   TGLSRENERIIEIALRDLQGGPNSTFQTFVNPQRFVSNSNIHGITTQMVNKPDVPRMEDL 181
           TG SRENERIIEIALRDLQGG NSTFQT VNPQ  V NS+IHGITT MVNKP VPRMEDL
Sbjct: 135 TGFSRENERIIEIALRDLQGGENSTFQTLVNPQCKVPNSHIHGITTHMVNKPGVPRMEDL 194

Query: 182 VPILLHYVRSREKPGGYVLLVAHNARCFDVPFIINELRRCSTKIPPNWLFVDTLPLAREL 361
           +PILL YVRSREKPGG V+ VAHNARCFDVPFIINELRR S +IPPNWLF+DTLPLAREL
Sbjct: 195 IPILLQYVRSREKPGGDVIFVAHNARCFDVPFIINELRRYSVEIPPNWLFLDTLPLAREL 254

Query: 362 MKSGGTKLSSTSLAALREFYGIKVDGTAHRAMVDVNTLSLVLPRLTFDLKLTLSGLVQKS 541
           +KSGGT LSSTSLAALR+ YGIKVDG+AHRAMVDVN LSL+L RLT DLKLTLS LV+KS
Sbjct: 255 IKSGGTTLSSTSLAALRDLYGIKVDGSAHRAMVDVNALSLILSRLTSDLKLTLSDLVKKS 314

Query: 542 FRESDI 559
           F ESDI
Sbjct: 315 FTESDI 320


>ref|XP_003535328.1| PREDICTED: DNA polymerase III polC-type-like [Glycine max]
          Length = 332

 Score =  262 bits (669), Expect = 5e-68
 Identities = 130/186 (69%), Positives = 152/186 (81%)
 Frame = +2

Query: 2   TGLSRENERIIEIALRDLQGGPNSTFQTFVNPQRFVSNSNIHGITTQMVNKPDVPRMEDL 181
           TG S+ N+RIIEIALRDL+GG NSTFQT VNPQ  V NS IHGI+T+MVN PDVPRMEDL
Sbjct: 136 TGYSKVNDRIIEIALRDLKGGENSTFQTLVNPQCHVPNSRIHGISTKMVNIPDVPRMEDL 195

Query: 182 VPILLHYVRSREKPGGYVLLVAHNARCFDVPFIINELRRCSTKIPPNWLFVDTLPLAREL 361
           +PILL Y++SREK GGYVL +AHN R FD PF+I+E  RC  ++P N LF+DTLPL REL
Sbjct: 196 IPILLQYIKSREKQGGYVLWIAHNGRAFDAPFLIHEFFRCCAELPRNSLFLDTLPLGREL 255

Query: 362 MKSGGTKLSSTSLAALREFYGIKVDGTAHRAMVDVNTLSLVLPRLTFDLKLTLSGLVQKS 541
           +KS G  LSS SL ALREFY +KVDG+AHRAMVDVNTLS +LP LT+DLKLTLS L++KS
Sbjct: 256 IKSEGRNLSSASLVALREFYKVKVDGSAHRAMVDVNTLSQILPMLTYDLKLTLSDLIRKS 315

Query: 542 FRESDI 559
              SD+
Sbjct: 316 LNISDL 321


>ref|XP_002512483.1| exonuclease, putative [Ricinus communis]
           gi|223548444|gb|EEF49935.1| exonuclease, putative
           [Ricinus communis]
          Length = 334

 Score =  244 bits (624), Expect = 9e-63
 Identities = 124/186 (66%), Positives = 146/186 (78%)
 Frame = +2

Query: 2   TGLSRENERIIEIALRDLQGGPNSTFQTFVNPQRFVSNSNIHGITTQMVNKPDVPRMEDL 181
           TG SRE ERIIEIAL+DL GG NSTFQT +NP R V NS+IHGITT MV KP VPRMEDL
Sbjct: 142 TGFSREYERIIEIALQDLHGGENSTFQTLINPGRIVPNSHIHGITTHMVCKPHVPRMEDL 201

Query: 182 VPILLHYVRSREKPGGYVLLVAHNARCFDVPFIINELRRCSTKIPPNWLFVDTLPLAREL 361
           +PILL Y+RSR+KPGGYVLLVAHN R FDVPF+INE +R    +P NWLF+DTLPLAR+ 
Sbjct: 202 IPILLQYIRSRQKPGGYVLLVAHNGRSFDVPFLINEFKRSGVDVPCNWLFMDTLPLARKW 261

Query: 362 MKSGGTKLSSTSLAALREFYGIKVDGTAHRAMVDVNTLSLVLPRLTFDLKLTLSGLVQKS 541
           MKS G K+SS SL  LRE +GIK++G+AHRAM DV  L+ +   LTF+LK TL  LV +S
Sbjct: 262 MKSKGLKISS-SLQGLREAFGIKLEGSAHRAMSDVRLLAKLFQMLTFNLKTTLPSLVAES 320

Query: 542 FRESDI 559
           F  S++
Sbjct: 321 FTASEL 326


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