BLASTX nr result

ID: Glycyrrhiza24_contig00012461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012461
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]...   191   1e-46
ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...   185   7e-45
ref|NP_001238215.1| uncharacterized protein LOC100527069 [Glycin...   178   1e-42
ref|XP_002530038.1| protein binding protein, putative [Ricinus c...   164   2e-38
ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|2...   162   8e-38

>ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]
           gi|355490951|gb|AES72154.1| RING-H2 finger protein
           [Medicago truncatula]
          Length = 151

 Score =  191 bits (485), Expect = 1e-46
 Identities = 100/155 (64%), Positives = 118/155 (76%), Gaps = 17/155 (10%)
 Frame = +3

Query: 93  MGLSNFPCAAEGVLPMIVMNTVLSVALLKNMFRSMLQVVGGINPSNN------IESQEES 254
           MGLSNFP AAEGV+P+IVMNTVLS+ LLKNMFRSMLQVVG  + +N+      +E  EE 
Sbjct: 1   MGLSNFPYAAEGVVPVIVMNTVLSMVLLKNMFRSMLQVVGCTSTTNSSYSPNIMEELEEE 60

Query: 255 FHHDDEMNSSNKSRERRVSISQYKSLLCHNNNN-----------SILVECCVCLSGYEAN 401
             +  E+++S   RERRVSI+QYK  LC+N +N           S +VECCVCLSG+EAN
Sbjct: 61  QVYSQEISNS---RERRVSITQYK-FLCYNRSNIARSSSSCGWTSPMVECCVCLSGFEAN 116

Query: 402 QEVSELPCKHFFHRGCLDKWFDNNHTTCPLCRSMD 506
           QEVSELPCKHFFHRGCLDKWFDN H++CPLCRSMD
Sbjct: 117 QEVSELPCKHFFHRGCLDKWFDNKHSSCPLCRSMD 151


>ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
          Length = 134

 Score =  185 bits (470), Expect = 7e-45
 Identities = 96/142 (67%), Positives = 115/142 (80%), Gaps = 4/142 (2%)
 Frame = +3

Query: 93  MGLSNFPCAAEGVLPMIVMNTVLSVALLKNMFRSMLQVVGGINPSNNIESQEESFHHDDE 272
           MGLSNFP A+EGVLP++V+NTVLSVA+LKNMFRSMLQVV G + + N  + E    HD+ 
Sbjct: 1   MGLSNFPSASEGVLPVLVINTVLSVAVLKNMFRSMLQVVLGGSAAANGSNIE----HDE- 55

Query: 273 MNSSNKSRERRVSISQYKSLLCHNNN----NSILVECCVCLSGYEANQEVSELPCKHFFH 440
             SS+ S ERRVSI+QYKSL CH+++    +  +VECCVCL  +EANQEVSELPCKH+FH
Sbjct: 56  --SSSSSWERRVSITQYKSL-CHSHDIGGTSMAMVECCVCLCRFEANQEVSELPCKHYFH 112

Query: 441 RGCLDKWFDNNHTTCPLCRSMD 506
           RGCLDKWFDN HTTCPLCRS+D
Sbjct: 113 RGCLDKWFDNKHTTCPLCRSID 134


>ref|NP_001238215.1| uncharacterized protein LOC100527069 [Glycine max]
           gi|255631484|gb|ACU16109.1| unknown [Glycine max]
          Length = 141

 Score =  178 bits (451), Expect = 1e-42
 Identities = 93/146 (63%), Positives = 113/146 (77%), Gaps = 8/146 (5%)
 Frame = +3

Query: 93  MGLSNFPCAA-EGVLPMIVMNTVLSVALLKNMFRSMLQVVGGINPSNNIESQEESFHHDD 269
           MGLSNFP +A E VLP++V+NTV SVALLK+MFRS LQVV G     +  S   +  HDD
Sbjct: 1   MGLSNFPISASERVLPVLVINTVFSVALLKSMFRSTLQVVFG----GSAASSSSNIEHDD 56

Query: 270 EMNSSNKSRERRVSISQYKSLLCHNNN-----NSILVECCVCLSGYEANQEVSELPCKHF 434
           E++SS+ SRERRVSI+QYKSL CH+++     +  +VECCVCL  +E NQEVSELPCKH+
Sbjct: 57  EISSSSSSRERRVSITQYKSL-CHSHDIGGGTSVAMVECCVCLCRFEDNQEVSELPCKHY 115

Query: 435 FHRGCLDKW--FDNNHTTCPLCRSMD 506
           FHRGCLDKW  FDN H+TCPLCRS+D
Sbjct: 116 FHRGCLDKWFEFDNKHSTCPLCRSID 141


>ref|XP_002530038.1| protein binding protein, putative [Ricinus communis]
           gi|223530454|gb|EEF32338.1| protein binding protein,
           putative [Ricinus communis]
          Length = 139

 Score =  164 bits (414), Expect = 2e-38
 Identities = 83/143 (58%), Positives = 103/143 (72%), Gaps = 6/143 (4%)
 Frame = +3

Query: 93  MGLSNFPCAAEGVLPMIVMNTVLSVALLKNMFRSMLQVVGGIN---PSNNIESQEESFHH 263
           MGLS+FP AAEGVLP++VMNTVLSVAL KN  R++LQVV G N   P    E        
Sbjct: 1   MGLSSFPSAAEGVLPVLVMNTVLSVALFKNWVRALLQVVMGANYWVPQYYYEQDRP---- 56

Query: 264 DDEMNSSNKSRERRVSISQYKSL---LCHNNNNSILVECCVCLSGYEANQEVSELPCKHF 434
            D  +  N  RERR+SI+Q+KS+   +  + ++S  VECCVCL G+E ++EVSEL CKHF
Sbjct: 57  -DVFSQDNARRERRISITQFKSMGAAIGTSRSSSSTVECCVCLCGFEEDEEVSELSCKHF 115

Query: 435 FHRGCLDKWFDNNHTTCPLCRSM 503
           FH+GCLDKWFDN H+TCPLCRS+
Sbjct: 116 FHKGCLDKWFDNKHSTCPLCRSI 138


>ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|222863634|gb|EEF00765.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  162 bits (409), Expect = 8e-38
 Identities = 85/137 (62%), Positives = 103/137 (75%), Gaps = 1/137 (0%)
 Frame = +3

Query: 93  MGLSNFPCAAEGVLPMIVMNTVLSVALLKNMFRSMLQVVGGINPSNNIESQEESFHHDDE 272
           MGLS+FP AAEGVLP++VMNTVLSVALLK+M RS+LQ+V G N +     +E      DE
Sbjct: 1   MGLSSFPGAAEGVLPVLVMNTVLSVALLKSMVRSVLQLVVGANWTPPDYEEEP-----DE 55

Query: 273 MNSSNKSRERRVSISQYKSLLCHNNN-NSILVECCVCLSGYEANQEVSELPCKHFFHRGC 449
               N +RERR+SI+Q+KSL  ++    +  +ECCVCL G+EA +EVSEL CKHFFHRGC
Sbjct: 56  YRREN-ARERRISITQFKSLNQNDGGARNSAMECCVCLCGFEAEEEVSELSCKHFFHRGC 114

Query: 450 LDKWFDNNHTTCPLCRS 500
           LDKWFDN H TCPLCRS
Sbjct: 115 LDKWFDNIHATCPLCRS 131


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