BLASTX nr result

ID: Glycyrrhiza24_contig00012426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012426
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553650.1| PREDICTED: ABC transporter C family member 4...   207   7e-52
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   201   6e-50
ref|XP_003591546.1| ABC transporter C family protein [Medicago t...   200   1e-49
ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4...   197   9e-49
emb|CBI36841.3| unnamed protein product [Vitis vinifera]              195   3e-48

>ref|XP_003553650.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1504

 Score =  207 bits (528), Expect = 7e-52
 Identities = 112/141 (79%), Positives = 114/141 (80%)
 Frame = -1

Query: 546  LDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGVIQKIIREDFAA 367
            LDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGV+QKIIREDFAA
Sbjct: 1388 LDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGVVQKIIREDFAA 1447

Query: 366  CTIISIAXXXXXXXXXXXXXXXXXXTIISIAHRIPTVMDCDRVLVVDAGRVKEFDKPSNL 187
            C                        TIISIAHRIPTVMDCDRVLVVDAGR KEFDKPSNL
Sbjct: 1448 C------------------------TIISIAHRIPTVMDCDRVLVVDAGRAKEFDKPSNL 1483

Query: 186  LQRPSLFGALVQEYASRSTGL 124
            LQR SLFGALVQEYA+RST L
Sbjct: 1484 LQRQSLFGALVQEYANRSTEL 1504


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  201 bits (511), Expect = 6e-50
 Identities = 106/141 (75%), Positives = 112/141 (79%)
 Frame = -1

Query: 546  LDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGVIQKIIREDFAA 367
            LD+LV DNG+NWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGVIQKIIREDFAA
Sbjct: 1390 LDALVADNGDNWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGVIQKIIREDFAA 1449

Query: 366  CTIISIAXXXXXXXXXXXXXXXXXXTIISIAHRIPTVMDCDRVLVVDAGRVKEFDKPSNL 187
            C                        TIISIAHRIPTVMDCDRVLV+DAG+ KEFDKPS L
Sbjct: 1450 C------------------------TIISIAHRIPTVMDCDRVLVIDAGKAKEFDKPSRL 1485

Query: 186  LQRPSLFGALVQEYASRSTGL 124
            L+RPSLF ALVQEYA+RS GL
Sbjct: 1486 LERPSLFAALVQEYANRSAGL 1506


>ref|XP_003591546.1| ABC transporter C family protein [Medicago truncatula]
            gi|355480594|gb|AES61797.1| ABC transporter C family
            protein [Medicago truncatula]
          Length = 1515

 Score =  200 bits (508), Expect = 1e-49
 Identities = 109/141 (77%), Positives = 112/141 (79%)
 Frame = -1

Query: 546  LDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGVIQKIIREDFAA 367
            LDSLVVDNG+NWSVGQRQLLCLGRVMLK+SRLLFMDEATASVDSQTD VIQKIIREDFAA
Sbjct: 1399 LDSLVVDNGDNWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDAVIQKIIREDFAA 1458

Query: 366  CTIISIAXXXXXXXXXXXXXXXXXXTIISIAHRIPTVMDCDRVLVVDAGRVKEFDKPSNL 187
                                     TIISIAHRIPTVMDCDRVLVVDAGR KEFDKPSNL
Sbjct: 1459 ------------------------RTIISIAHRIPTVMDCDRVLVVDAGRAKEFDKPSNL 1494

Query: 186  LQRPSLFGALVQEYASRSTGL 124
            LQR SLF ALVQEYA+RSTGL
Sbjct: 1495 LQRQSLFAALVQEYANRSTGL 1515


>ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  197 bits (501), Expect = 9e-49
 Identities = 106/141 (75%), Positives = 112/141 (79%)
 Frame = -1

Query: 546  LDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGVIQKIIREDFAA 367
            LD+ VVDNG+NWSVGQRQLLCLGRVMLK+SRLLFMDEATASVDSQTD VIQKIIREDFAA
Sbjct: 1385 LDTSVVDNGDNWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDAVIQKIIREDFAA 1444

Query: 366  CTIISIAXXXXXXXXXXXXXXXXXXTIISIAHRIPTVMDCDRVLVVDAGRVKEFDKPSNL 187
                                     TIISIAHRIPTVMDCDRVLVVDAGR KEFD P+NL
Sbjct: 1445 ------------------------RTIISIAHRIPTVMDCDRVLVVDAGRAKEFDSPANL 1480

Query: 186  LQRPSLFGALVQEYASRSTGL 124
            LQRPSLFGALVQEYA+RS+GL
Sbjct: 1481 LQRPSLFGALVQEYANRSSGL 1501


>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  195 bits (496), Expect = 3e-48
 Identities = 103/141 (73%), Positives = 111/141 (78%)
 Frame = -1

Query: 546  LDSLVVDNGENWSVGQRQLLCLGRVMLKRSRLLFMDEATASVDSQTDGVIQKIIREDFAA 367
            LDSLVVDNG+NWSVGQRQLLCLGRVMLKRSR+LF+DEATASVDSQTD VIQ+IIREDFA 
Sbjct: 963  LDSLVVDNGDNWSVGQRQLLCLGRVMLKRSRILFLDEATASVDSQTDAVIQRIIREDFAN 1022

Query: 366  CTIISIAXXXXXXXXXXXXXXXXXXTIISIAHRIPTVMDCDRVLVVDAGRVKEFDKPSNL 187
            C                        TIISIAHRIPTVMDCDRVLV+DAGR KEFDKPS L
Sbjct: 1023 C------------------------TIISIAHRIPTVMDCDRVLVIDAGRAKEFDKPSRL 1058

Query: 186  LQRPSLFGALVQEYASRSTGL 124
            L+R SLFGALVQEYA+RS G+
Sbjct: 1059 LERHSLFGALVQEYANRSAGM 1079


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