BLASTX nr result

ID: Glycyrrhiza24_contig00012413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012413
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName:...    76   2e-12
ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|3...    74   1e-11
ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus comm...    72   4e-11
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10

>sp|O24308.1|TOP2_PEA RecName: Full=DNA topoisomerase 2; AltName: Full=DNA topoisomerase
            II; AltName: Full=PsTopII gi|2330651|emb|CAA74891.1|
            topoisomerase II [Pisum sativum]
          Length = 1462

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/44 (81%), Positives = 39/44 (88%)
 Frame = -1

Query: 458  QALSQKLITEMLQPTESTGASPEKKVRKMRESPFNKKSGSILGR 327
            Q+  QKL+T+MLQP E TG SPEKKVRKMRESPFNKKSGSILGR
Sbjct: 1344 QSAGQKLLTDMLQPAEGTGTSPEKKVRKMRESPFNKKSGSILGR 1387


>ref|XP_003599271.1| DNA topoisomerase [Medicago truncatula] gi|355488319|gb|AES69522.1|
            DNA topoisomerase [Medicago truncatula]
          Length = 1567

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = -1

Query: 452  LSQKLITEMLQPTESTGASPEKKVRKMRESPFNKKSGSILGR 327
            L QKL+T+MLQP ES G SPEKKVRKMRESPFNKKSGSILG+
Sbjct: 1451 LGQKLLTDMLQPAESIGTSPEKKVRKMRESPFNKKSGSILGK 1492


>ref|XP_002517802.1| DNA topoisomerase II, putative [Ricinus communis]
            gi|223543074|gb|EEF44609.1| DNA topoisomerase II,
            putative [Ricinus communis]
          Length = 1212

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -1

Query: 458  QALSQKLITEMLQPTESTGASPEKKVRKMRESPFNKKSGSILGR 327
            Q L QKL+TEML+P E+ G SPEKKVRKMR SPFNKKSGS+LGR
Sbjct: 1089 QGLGQKLLTEMLKPAENPGISPEKKVRKMRASPFNKKSGSVLGR 1132


>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
            predicted protein [Populus trichocarpa]
          Length = 1482

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -1

Query: 458  QALSQKLITEMLQPTESTGASPEKKVRKMRESPFNKKSGSILGR 327
            Q L QKL+TEML+P E  G SPEKKVRK+R SPFNKKSGS+LGR
Sbjct: 1372 QGLGQKLLTEMLKPAEGAGISPEKKVRKVRASPFNKKSGSVLGR 1415


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
            predicted protein [Populus trichocarpa]
          Length = 1468

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = -1

Query: 458  QALSQKLITEMLQPTESTGASPEKKVRKMRESPFNKKSGSILG 330
            Q L Q+L+TEML+P E +G SPEKKVRKMR SPFNKKSGS+LG
Sbjct: 1362 QGLGQQLLTEMLKPAEESGISPEKKVRKMRASPFNKKSGSLLG 1404


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