BLASTX nr result

ID: Glycyrrhiza24_contig00012392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012392
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...    90   7e-16
ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...    89   2e-15
ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal doma...    87   5e-15
ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|2...    85   2e-14
ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal doma...    82   2e-13

>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 954

 Score = 89.7 bits (221), Expect = 7e-16
 Identities = 47/64 (73%), Positives = 51/64 (79%)
 Frame = +1

Query: 1    KVQAAEKALGSLRTVLDQGTQKRQRSPRSSLQGLSNKRLRQENSRTMQRFPASARYPRNA 180
            K+QAAEKALGSLR+ L Q  QKRQ SPR   QG SNKRL+QE  R MQR P+SARYPRNA
Sbjct: 892  KMQAAEKALGSLRSKLGQSIQKRQSSPRPH-QGFSNKRLKQEYPRPMQRMPSSARYPRNA 950

Query: 181  PPIP 192
            PPIP
Sbjct: 951  PPIP 954


>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 46/64 (71%), Positives = 51/64 (79%)
 Frame = +1

Query: 1    KVQAAEKALGSLRTVLDQGTQKRQRSPRSSLQGLSNKRLRQENSRTMQRFPASARYPRNA 180
            K+QAAEKALG+LR+ L Q  QK Q SPR   QG SNKRL+QE  RTMQR P+SARYPRNA
Sbjct: 898  KMQAAEKALGNLRSKLGQSIQKMQSSPRPH-QGFSNKRLKQEYPRTMQRMPSSARYPRNA 956

Query: 181  PPIP 192
            PPIP
Sbjct: 957  PPIP 960


>ref|XP_003545893.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 958

 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 44/64 (68%), Positives = 54/64 (84%)
 Frame = +1

Query: 1    KVQAAEKALGSLRTVLDQGTQKRQRSPRSSLQGLSNKRLRQENSRTMQRFPASARYPRNA 180
            K+QAA+KAL SLRT+ +QGT+KR  SPRS +QGL+NKRL+QE  RT+QR P SARYPRNA
Sbjct: 896  KMQAAKKALESLRTMFNQGTRKRHGSPRS-MQGLANKRLKQEYPRTLQRIPYSARYPRNA 954

Query: 181  PPIP 192
            P +P
Sbjct: 955  PLVP 958


>ref|XP_002329763.1| predicted protein [Populus trichocarpa] gi|222870825|gb|EEF07956.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 84.7 bits (208), Expect = 2e-14
 Identities = 43/64 (67%), Positives = 51/64 (79%)
 Frame = +1

Query: 1   KVQAAEKALGSLRTVLDQGTQKRQRSPRSSLQGLSNKRLRQENSRTMQRFPASARYPRNA 180
           K+QAAEKALGSLRT+  Q TQKRQ SPR  +QG+ NKRL+QE  R +QR P SARY +NA
Sbjct: 162 KMQAAEKALGSLRTMFGQYTQKRQGSPRP-MQGMPNKRLKQEFPRVLQRMPPSARYHKNA 220

Query: 181 PPIP 192
           PP+P
Sbjct: 221 PPVP 224


>ref|XP_003543063.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            1-like [Glycine max]
          Length = 960

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 42/64 (65%), Positives = 52/64 (81%)
 Frame = +1

Query: 1    KVQAAEKALGSLRTVLDQGTQKRQRSPRSSLQGLSNKRLRQENSRTMQRFPASARYPRNA 180
            K+QAA+KALGSLRT+ +QG+ KR  SPRS +QGL+NKRL+ E   T+QR P SARYPRNA
Sbjct: 898  KMQAAKKALGSLRTMFNQGSLKRHGSPRS-MQGLANKRLKPEYPPTLQRVPYSARYPRNA 956

Query: 181  PPIP 192
            P +P
Sbjct: 957  PLVP 960


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