BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012383
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617675.1| Pentatricopeptide repeat-containing protein ...   254   4e-66
ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containi...   240   8e-62
emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]   180   9e-44
ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35
ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containi...   153   2e-35

>ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355519010|gb|AET00634.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 758

 Score =  254 bits (650), Expect = 4e-66
 Identities = 123/160 (76%), Positives = 136/160 (85%)
 Frame = +2

Query: 2   EMQESQIHPDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFG 181
           EM E+Q+ PDG+VIGCILSGFGNS DV GGK FHGLIIRRHY PDEMV+NSLL MYCKFG
Sbjct: 305 EMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFG 364

Query: 182 MLSFAERLFHQCRQSIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIAS 361
           MLSFAERLF + + SIE WN M+VGYGRIG+NVKCI+LFREMQYLGI  E      AIAS
Sbjct: 365 MLSFAERLFQRSQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIAS 424

Query: 362 CARLRAINLGRSIHCNVIKGFVDENVSVTNSLIEMYGRCN 481
           C +L  INLGRSIHCNVIKGFVDE +SVTNSLIEMYG+C+
Sbjct: 425 CGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCD 464



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
 Frame = +2

Query: 23  HPDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFGMLSFAER 202
           +P+   +  +LS   + A +  G+  H  I  + +  +  +  +L+ MY K G L  +  
Sbjct: 512 NPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSRE 571

Query: 203 LFHQCRQS-IECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIASCARLRA 379
           +F    +  + CWN+M+ GYG  G     IE+F  M+   +          +++CA    
Sbjct: 572 VFDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGL 631

Query: 380 INLGRSIHCNVIKGFVDENVSVTNSLIEMYGR-CN 481
           +  G+++   +    V  N+     ++++ GR CN
Sbjct: 632 VEEGKNVFAKMQSYSVKPNLKHYTCMVDLLGRSCN 666


>ref|XP_003523674.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Glycine max]
          Length = 750

 Score =  240 bits (613), Expect = 8e-62
 Identities = 113/160 (70%), Positives = 136/160 (85%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   EMQESQIHPDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFG 181
           EMQE++I PDG+V+GC+LSGFGNS DV  GK FHG+IIRR+YV DE VN+SLLFMYCKFG
Sbjct: 296 EMQENEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRRYYVDDEKVNDSLLFMYCKFG 355

Query: 182 MLSFAERLFHQCRQSIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIAS 361
           MLS AER+F  C+ S + WN MV GYG++GENVKC+ELFREMQ+LGI+ E      AIAS
Sbjct: 356 MLSLAERIFPLCQGSGDGWNFMVFGYGKVGENVKCVELFREMQWLGIHSETIGIASAIAS 415

Query: 362 CARLRAINLGRSIHCNVIKGFVD-ENVSVTNSLIEMYGRC 478
           CA+L A+NLGRSIHCNVIKGF+D +N+SVTNSL+EMYG+C
Sbjct: 416 CAQLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKC 455



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   EMQESQIHPDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEM-VNNSLLFMYCKF 178
           EMQ   IH + I I   ++       V+ G+  H  +I+       + V NSL+ MY K 
Sbjct: 396 EMQWLGIHSETIGIASAIASCAQLGAVNLGRSIHCNVIKGFLDGKNISVTNSLVEMYGKC 455

Query: 179 GMLSFAERLFHQCRQSIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIA 358
           G ++FA R+F+     +  WN+++  +  I ++ + + LF +M               ++
Sbjct: 456 GKMTFAWRIFNTSETDVVSWNTLISSHVHIKQHEEAVNLFSKMVREDQKPNTATLVVVLS 515

Query: 359 SCARLRAINLGRSIHCNVIKGFVDENVSVTNSLIEMYGRC 478
           +C+ L ++  G  +HC + +     N+ +  +LI+MY +C
Sbjct: 516 ACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKC 555



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
 Frame = +2

Query: 65  GNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFGMLSFAERLFHQC-RQSIECWN 241
           GN   VS G   HG++++        + +S+L MY K G+   A R F +   + + CW 
Sbjct: 218 GNLGAVSEGSCLHGVVVKNGVA--SFIQSSVLDMYSKCGVPREAYRSFCEVIHKDLLCWT 275

Query: 242 SMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIASCARLRAINLGRSIHCNVIKG 421
           S++  Y RIG   +C+ LFREMQ   I  +       ++       +  G++ H  +I+ 
Sbjct: 276 SVIGVYARIGMMGECLRLFREMQENEIRPDGVVVGCVLSGFGNSMDVFQGKAFHGVIIRR 335

Query: 422 FVDENVSVTNSLIEMY 469
           +  ++  V +SL+ MY
Sbjct: 336 YYVDDEKVNDSLLFMY 351



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
 Frame = +2

Query: 26  PDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFGMLSFAERL 205
           P+   +  +LS   + A +  G+  H  I    +  +  +  +L+ MY K G L  +  +
Sbjct: 505 PNTATLVVVLSACSHLASLEKGERVHCYINESGFTLNLPLGTALIDMYAKCGQLQKSRMV 564

Query: 206 FHQCRQS-IECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIASCARLRAI 382
           F    +  + CWN+M+ GYG  G     +E+F+ M+   +          +++CA    +
Sbjct: 565 FDSMMEKDVICWNAMISGYGMNGYAESALEIFQHMEESNVMPNGITFLSLLSACAHAGLV 624

Query: 383 NLGRSIHCNVIKGFVDENVSVTNSLIEMYGR 475
             G+ +   +    V+ N+     ++++ GR
Sbjct: 625 EEGKYMFARMKSYSVNPNLKHYTCMVDLLGR 655


>emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
          Length = 1111

 Score =  180 bits (457), Expect = 9e-44
 Identities = 92/159 (57%), Positives = 111/159 (69%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2    EMQESQIHPDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFG 181
            EM  S I+PDGIVI C+LS F NS  V   K FHGLIIRRHY  D+MV N+LL MYCKFG
Sbjct: 658  EMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFG 717

Query: 182  MLSFAERLFHQCR-QSIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIA 358
             L  AE+ F +   Q+ E WN MV GYG+IG  +KCI LFREMQ LGI  +       ++
Sbjct: 718  FLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVS 777

Query: 359  SCARLRAINLGRSIHCNVIKGFVDENVSVTNSLIEMYGR 475
            SC++L A +L RSIHC +IK  +DENVSV NSLI+MYG+
Sbjct: 778  SCSQLGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGK 816



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 41/159 (25%), Positives = 75/159 (47%)
 Frame = +2

Query: 2    EMQESQIHPDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFG 181
            EMQ   I  D   +  ++S           +  H  +I+     +  VNNSL+ MY K G
Sbjct: 759  EMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSG 818

Query: 182  MLSFAERLFHQCRQSIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIAS 361
             L+ A R+F +  + I  WN+++  Y   G   + + L+ +M    +          +++
Sbjct: 819  NLTIARRIFCRIPRDIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSA 878

Query: 362  CARLRAINLGRSIHCNVIKGFVDENVSVTNSLIEMYGRC 478
            C+ L ++  G  +H  +  G  + N+S+  +LI+MY +C
Sbjct: 879  CSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKC 917



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/136 (29%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
 Frame = +2

Query: 65  GNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFGMLSFAERLFHQC-RQSIECWN 241
           GN   +  G+  HGL+++      ++V +SLL MY K G    A R F +   + I  W 
Sbjct: 578 GNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWT 637

Query: 242 SMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIASCARLRAINLGRSIHCNVIKG 421
           SM+  Y R+G   +CI++F EM   GIY +       ++S +    +   ++ H  +I+ 
Sbjct: 638 SMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRR 697

Query: 422 FVDENVSVTNSLIEMY 469
               +  V N+L+ MY
Sbjct: 698 HYTLDQMVQNALLSMY 713


>ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 754

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/158 (47%), Positives = 103/158 (65%)
 Frame = +2

Query: 2   EMQESQIHPDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFG 181
           EMQ S+I PD IVI C+L GFGNS  +  GK FH  I+++      + +N+LL MYCKFG
Sbjct: 301 EMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFG 360

Query: 182 MLSFAERLFHQCRQSIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIAS 361
            L  A ++FH   +S E W++M++GY  +G+  KCI   REM  LG   +       I+S
Sbjct: 361 HLGTANKIFHSFHKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISS 420

Query: 362 CARLRAINLGRSIHCNVIKGFVDENVSVTNSLIEMYGR 475
           C+++ AIN+GRSIHC  IK  + ENVSV NSL++MYG+
Sbjct: 421 CSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGK 458



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
 Frame = +2

Query: 26  PDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFGMLSFAERL 205
           PD   +  ++S       ++ G+  H   I+   + +  V NSL+ MY K G ++   R+
Sbjct: 409 PDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRI 468

Query: 206 FHQCRQ-SIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIASCARLRAI 382
           FH+  Q  +  WN+++  Y + G   + I LF +M    +Y         +++CA L ++
Sbjct: 469 FHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASL 528

Query: 383 NLGRSIHCNVIKGFVDENVSVTNSLIEMYGRC 478
           + G  IH  + +   + N+++  +LI+MY +C
Sbjct: 529 DEGEKIHQYIKENGFESNITIRTALIDMYAKC 560



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2   EMQESQIHPDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFG 181
           +M + +++P+ +    +LS   + A +  G+  H  I    +  +  +  +L+ MY K G
Sbjct: 502 KMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCG 561

Query: 182 MLSFAERLFHQCRQ-SIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIA 358
            L  + +LF+   +  +  WN M+  YG  G     +E+F+ M+   I          ++
Sbjct: 562 ELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLS 621

Query: 359 SCARLRAINLGRSIHCNVIKGFVDENVSVTNSLIEMYGR 475
           +C     +  GR +   + K  ++ ++    S+I++ GR
Sbjct: 622 ACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGR 660


>ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
           mitochondrial-like [Cucumis sativus]
          Length = 784

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/158 (47%), Positives = 103/158 (65%)
 Frame = +2

Query: 2   EMQESQIHPDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFG 181
           EMQ S+I PD IVI C+L GFGNS  +  GK FH  I+++      + +N+LL MYCKFG
Sbjct: 331 EMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFG 390

Query: 182 MLSFAERLFHQCRQSIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIAS 361
            L  A ++FH   +S E W++M++GY  +G+  KCI   REM  LG   +       I+S
Sbjct: 391 HLGTANKIFHSFHKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISS 450

Query: 362 CARLRAINLGRSIHCNVIKGFVDENVSVTNSLIEMYGR 475
           C+++ AIN+GRSIHC  IK  + ENVSV NSL++MYG+
Sbjct: 451 CSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGK 488



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
 Frame = +2

Query: 26  PDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFGMLSFAERL 205
           PD   +  ++S       ++ G+  H   I+   + +  V NSL+ MY K G ++   R+
Sbjct: 439 PDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRI 498

Query: 206 FHQCRQ-SIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIASCARLRAI 382
           FH+  Q  +  WN+++  Y + G   + I LF +M    +Y         +++CA L ++
Sbjct: 499 FHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSACAHLASL 558

Query: 383 NLGRSIHCNVIKGFVDENVSVTNSLIEMYGRC 478
           + G  IH  + +   + N+++  +LI+MY +C
Sbjct: 559 DEGEKIHQYIKENGFESNITIRTALIDMYAKC 590



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 34/159 (21%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2    EMQESQIHPDGIVIGCILSGFGNSADVSGGKVFHGLIIRRHYVPDEMVNNSLLFMYCKFG 181
            +M + +++P+ +    +LS   + A +  G+  H  I    +  +  +  +L+ MY K G
Sbjct: 532  KMVKEKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCG 591

Query: 182  MLSFAERLFHQCRQ-SIECWNSMVVGYGRIGENVKCIELFREMQYLGIYCEXXXXXXAIA 358
             L  + +LF+   +  +  WN M+  YG  G     +E+F+ M+   I          ++
Sbjct: 592  ELETSRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLS 651

Query: 359  SCARLRAINLGRSIHCNVIKGFVDENVSVTNSLIEMYGR 475
            +C     +  GR +   + K  ++ ++    S+I++ GR
Sbjct: 652  ACNHTGHVLEGRHLFDRMQKYGIEPSLKHYASIIDLLGR 690