BLASTX nr result

ID: Glycyrrhiza24_contig00012377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012377
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235362.1| uncharacterized protein LOC100306203 [Glycin...   236   4e-60
ref|XP_003542389.1| PREDICTED: E3 ubiquitin-protein ligase Os03g...   225   8e-57
ref|XP_003609919.1| RING finger protein [Medicago truncatula] gi...   197   3e-48
gb|AFK49342.1| unknown [Lotus japonicus]                              189   5e-46
ref|XP_002309447.1| predicted protein [Populus trichocarpa] gi|1...   169   5e-40

>ref|NP_001235362.1| uncharacterized protein LOC100306203 [Glycine max]
           gi|255627855|gb|ACU14272.1| unknown [Glycine max]
          Length = 172

 Score =  236 bits (602), Expect = 4e-60
 Identities = 119/184 (64%), Positives = 138/184 (75%)
 Frame = -3

Query: 755 MGFYVEDPMSGLTISQAIYEAALIIAVLRWVLFLVFRIIKDRRSTRSSLHTQPEXXXXXX 576
           MGFY EDP+SGLTI QAIYE AL+IAVLRWVL L+FR+I DR++T+S     PE      
Sbjct: 1   MGFYAEDPLSGLTIGQAIYEVALMIAVLRWVLCLIFRVINDRKTTQSDETPTPEPCSQMT 60

Query: 575 XSWESLRDNPLLLTTFGEIVERLPETDDTCAVCLNQLRMEDEVRELMNCYHVFHRECIDR 396
                 +D+ LLLTTFGEI ERLPET++TCAVCL+QL +EDEVRELMNCYHVFHRECIDR
Sbjct: 61  RD----KDSILLLTTFGEIKERLPETEETCAVCLSQLSVEDEVRELMNCYHVFHRECIDR 116

Query: 395 WVEHDHHHESEPTCPLCRAPLVTPXXXXXXXXXXXXSGCLPPPNPSWAVERLLYLFGDDL 216
           W+EH+H + S  TCP+CRAPL++               CLPPP PSWAVERLLYLFGDDL
Sbjct: 117 WLEHEHENHS-ATCPICRAPLLSSSCHHSSAT------CLPPPQPSWAVERLLYLFGDDL 169

Query: 215 LQPC 204
           L PC
Sbjct: 170 L-PC 172


>ref|XP_003542389.1| PREDICTED: E3 ubiquitin-protein ligase Os03g0188200-like [Glycine
           max]
          Length = 170

 Score =  225 bits (574), Expect = 8e-57
 Identities = 114/184 (61%), Positives = 134/184 (72%)
 Frame = -3

Query: 755 MGFYVEDPMSGLTISQAIYEAALIIAVLRWVLFLVFRIIKDRRSTRSSLHTQPEXXXXXX 576
           MGFY ED +SGLTI QAIYE AL+IAVLRWVL L+FR++ DRR T S      E      
Sbjct: 1   MGFYAEDTLSGLTIGQAIYEVALMIAVLRWVLCLIFRVMNDRRRTESDETPAAEACC--- 57

Query: 575 XSWESLRDNPLLLTTFGEIVERLPETDDTCAVCLNQLRMEDEVRELMNCYHVFHRECIDR 396
              +   +N L+LTTFGEI ERLP+T++TCAVCL+QL +EDEVRELMNCYHVFHRECI+R
Sbjct: 58  ---QKEYNNTLVLTTFGEIKERLPQTEETCAVCLSQLSVEDEVRELMNCYHVFHRECIER 114

Query: 395 WVEHDHHHESEPTCPLCRAPLVTPXXXXXXXXXXXXSGCLPPPNPSWAVERLLYLFGDDL 216
           W+EH+H +   PTCPLCRAPL++               C+PPP PSWAVERLLYLFGDDL
Sbjct: 115 WLEHEHENHI-PTCPLCRAPLLSSCCHHSSTT------CVPPPQPSWAVERLLYLFGDDL 167

Query: 215 LQPC 204
           L PC
Sbjct: 168 L-PC 170


>ref|XP_003609919.1| RING finger protein [Medicago truncatula]
           gi|355510974|gb|AES92116.1| RING finger protein
           [Medicago truncatula] gi|388516109|gb|AFK46116.1|
           unknown [Medicago truncatula]
          Length = 169

 Score =  197 bits (500), Expect = 3e-48
 Identities = 106/185 (57%), Positives = 123/185 (66%), Gaps = 1/185 (0%)
 Frame = -3

Query: 755 MGFYVEDPMSGLTISQAIYEAALIIAVLRWVLFLVFRIIKDRRSTRSSLHTQPEXXXXXX 576
           MGFY +  +S LTISQAIYEAALIIAVLRW++ LVF+IIK  R+       Q        
Sbjct: 1   MGFYTQQSISNLTISQAIYEAALIIAVLRWIICLVFKIIKHTRTKPVEDQQQYSSCCQM- 59

Query: 575 XSWESLRDNPLLLTTFGEIVERLPETDDTCAVCLNQLRMEDEVRELMNCYHVFHRECIDR 396
                     L LT+FGEI ER PET++TCAVCLN+L+MEDEVRELMNC HVFH+ECID+
Sbjct: 60  ----------LPLTSFGEIKERHPETEETCAVCLNKLKMEDEVRELMNCDHVFHKECIDK 109

Query: 395 WVEHDHHHES-EPTCPLCRAPLVTPXXXXXXXXXXXXSGCLPPPNPSWAVERLLYLFGDD 219
           W+EH H +E+   TCPLCRAPL+                   PP PSWAVERLLYLFGDD
Sbjct: 110 WLEHGHDNENHNQTCPLCRAPLINSYSLSSEISSCG----FSPPQPSWAVERLLYLFGDD 165

Query: 218 LLQPC 204
           LL PC
Sbjct: 166 LL-PC 169


>gb|AFK49342.1| unknown [Lotus japonicus]
          Length = 144

 Score =  189 bits (481), Expect = 5e-46
 Identities = 98/152 (64%), Positives = 109/152 (71%), Gaps = 1/152 (0%)
 Frame = -3

Query: 656 LVFRIIKDRRSTRSSLHTQPEXXXXXXXSWESLRDNPLLLTTFGEIVERLPETDDTCAVC 477
           L FR++K R     SLHT PE        WES   NPL LTTFGEI+ERLPET DTCAVC
Sbjct: 3   LAFRVMKSRTQ---SLHTPPEPSSSSSS-WESSSFNPLPLTTFGEIMERLPETKDTCAVC 58

Query: 476 LNQLRMEDEVRELMNCYHVFHRECIDRWVEHDHHHES-EPTCPLCRAPLVTPXXXXXXXX 300
           LNQL++ED VRELMNCYH+FH+ECIDRWVEHDH  E+  PTCPLCRAPL++         
Sbjct: 59  LNQLKIEDGVRELMNCYHIFHKECIDRWVEHDHESENHNPTCPLCRAPLLS-----SCCL 113

Query: 299 XXXXSGCLPPPNPSWAVERLLYLFGDDLLQPC 204
               S C+ PP PSWAVERLLYLFGDDLL PC
Sbjct: 114 SSESSSCVSPPQPSWAVERLLYLFGDDLL-PC 144


>ref|XP_002309447.1| predicted protein [Populus trichocarpa] gi|118483893|gb|ABK93837.1|
           unknown [Populus trichocarpa]
           gi|222855423|gb|EEE92970.1| predicted protein [Populus
           trichocarpa]
          Length = 168

 Score =  169 bits (429), Expect = 5e-40
 Identities = 92/182 (50%), Positives = 116/182 (63%), Gaps = 1/182 (0%)
 Frame = -3

Query: 755 MGFYVEDPMSGLTISQAIYEAALIIAVLRWVLFLVFRIIKDRRSTRSSLHTQPEXXXXXX 576
           MGF+VE+  SGL ++  +Y+AAL++AVLRW L    R     R+  +S            
Sbjct: 1   MGFFVEE--SGLIVTHLLYKAALVLAVLRWALAWALRF--KNRTHLASPSNDSLRRSHPV 56

Query: 575 XSWESLRDNPLLLTTFGEIVERLPETDDTCAVCLNQLRMEDEVRELMNCYHVFHRECIDR 396
            S + +RD  L+LTTFG++ ER+P   DTCAVCL+QLR +DEVREL NC HVFHR+CIDR
Sbjct: 57  PSSQQIRDG-LILTTFGDVTERMPGVCDTCAVCLSQLRDQDEVRELRNCCHVFHRDCIDR 115

Query: 395 WVEHDHHH-ESEPTCPLCRAPLVTPXXXXXXXXXXXXSGCLPPPNPSWAVERLLYLFGDD 219
           WV+HDH H E+  TCPLCRAPL+T                     PSWAVER+LYLFGDD
Sbjct: 116 WVDHDHEHDENHNTCPLCRAPLLTTSQSLARTR----------AEPSWAVERILYLFGDD 165

Query: 218 LL 213
           L+
Sbjct: 166 LV 167


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