BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012363
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like...   194   2e-47
ref|XP_003543338.1| PREDICTED: pre-mRNA-processing factor 6-like...   191   9e-47
ref|XP_002517947.1| pre-mRNA splicing factor, putative [Ricinus ...   157   2e-36
ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like...   155   1e-35
ref|XP_003598739.1| Pre-mRNA-processing factor [Medicago truncat...   147   2e-33

>ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1041

 Score =  194 bits (492), Expect = 2e-47
 Identities = 97/134 (72%), Positives = 107/134 (79%), Gaps = 4/134 (2%)
 Frame = +2

Query: 242 MVFIVPPSGRTLALDVNPNTTTLHLLKLAIQQSHGIPVXXXXXXXXXXXXXXGEND---- 409
           MVFIV P+ +T ++D+NPNTTTLHLLKLAIQQ+  +P+               +ND    
Sbjct: 1   MVFIVSPNHKTFSIDLNPNTTTLHLLKLAIQQTLTLPISHQRLFLSHSRRLTADNDGSDD 60

Query: 410 SLLISNLGVGPYSTLTLQVPFFGGTQPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTR 589
           SLLIS+LGVGPYSTLTL VPF GGT PPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTR
Sbjct: 61  SLLISDLGVGPYSTLTLHVPFLGGTNPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTR 120

Query: 590 SDIGPARAAPDLPD 631
           SDIGPARAAPDLPD
Sbjct: 121 SDIGPARAAPDLPD 134


>ref|XP_003543338.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1034

 Score =  191 bits (486), Expect = 9e-47
 Identities = 96/134 (71%), Positives = 105/134 (78%), Gaps = 4/134 (2%)
 Frame = +2

Query: 242 MVFIVPPSGRTLALDVNPNTTTLHLLKLAIQQSHGIPVXXXXXXXXXXXXXXGEND---- 409
           MVFIV P+ +T ++D+NPNTTTLHLLKLAIQ    +P+               +ND    
Sbjct: 1   MVFIVSPNHKTFSIDINPNTTTLHLLKLAIQHILTLPISHQRLFLSHSRRLSADNDGSDD 60

Query: 410 SLLISNLGVGPYSTLTLQVPFFGGTQPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTR 589
           SLLIS+LGVGPYSTLTL VPF GGT PPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTR
Sbjct: 61  SLLISDLGVGPYSTLTLHVPFLGGTNPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTR 120

Query: 590 SDIGPARAAPDLPD 631
           SDIGPARAAPDLPD
Sbjct: 121 SDIGPARAAPDLPD 134


>ref|XP_002517947.1| pre-mRNA splicing factor, putative [Ricinus communis]
           gi|223542929|gb|EEF44465.1| pre-mRNA splicing factor,
           putative [Ricinus communis]
          Length = 1031

 Score =  157 bits (397), Expect = 2e-36
 Identities = 81/135 (60%), Positives = 94/135 (69%), Gaps = 5/135 (3%)
 Frame = +2

Query: 242 MVFIVPPSGRTLALDVNPNTTTLHLLKLAIQQSHGIPVXXXXXXXXXXXXXXGEN----- 406
           MVF+  P+ +TL+L++NPNTTTL LLK  IQ    IP+                      
Sbjct: 1   MVFVKSPNNKTLSLNLNPNTTTLSLLKQHIQSQTQIPISDQFFLNPSFNVYSSSKYANIF 60

Query: 407 DSLLISNLGVGPYSTLTLQVPFFGGTQPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTT 586
           +S  +S+LG+  +STLTL +PF GGTQ PA PKPR DFLNSKPPPNYVAGLGRGATGFTT
Sbjct: 61  ESCPLSHLGITNFSTLTLYIPFHGGTQTPAPPKPRLDFLNSKPPPNYVAGLGRGATGFTT 120

Query: 587 RSDIGPARAAPDLPD 631
           RSDIGPARAAPDLPD
Sbjct: 121 RSDIGPARAAPDLPD 135


>ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like [Cucumis sativus]
           gi|449514699|ref|XP_004164455.1| PREDICTED:
           pre-mRNA-processing factor 6-like [Cucumis sativus]
          Length = 1023

 Score =  155 bits (391), Expect = 1e-35
 Identities = 79/130 (60%), Positives = 93/130 (71%)
 Frame = +2

Query: 242 MVFIVPPSGRTLALDVNPNTTTLHLLKLAIQQSHGIPVXXXXXXXXXXXXXXGENDSLLI 421
           MVF+  P+ +TL L++NP+TT++  LK AI+    IP+                NDS L+
Sbjct: 1   MVFLSIPNQKTLFLNLNPSTTSILNLKRAIEDVSHIPISFQRLFLSQSFQLSHFNDSTLL 60

Query: 422 SNLGVGPYSTLTLQVPFFGGTQPPAVPKPRFDFLNSKPPPNYVAGLGRGATGFTTRSDIG 601
           S+L + P STLTL VP FGG Q P +PKPR DFLNSKPPPNYVAGLGRGATGFTTRSDIG
Sbjct: 61  SHLRILPNSTLTLHVPLFGGMQAPTIPKPRLDFLNSKPPPNYVAGLGRGATGFTTRSDIG 120

Query: 602 PARAAPDLPD 631
           PARAAPDLPD
Sbjct: 121 PARAAPDLPD 130


>ref|XP_003598739.1| Pre-mRNA-processing factor [Medicago truncatula]
           gi|355487787|gb|AES68990.1| Pre-mRNA-processing factor
           [Medicago truncatula]
          Length = 800

 Score =  147 bits (371), Expect = 2e-33
 Identities = 73/116 (62%), Positives = 86/116 (74%), Gaps = 1/116 (0%)
 Frame = +2

Query: 242 MVFIVPPSGRTLALDVNPNTTTLHLLKLAIQQSHGIPVXXXXXXXXXXXXXXGENDSLLI 421
           MVF+VPP+G+ L+L +NPNTTTLH LKL I+Q HGI +              G NDS+LI
Sbjct: 1   MVFVVPPTGKILSLYINPNTTTLHNLKLLIEQFHGISIEQQRIFLSQSLPLLGHNDSVLI 60

Query: 422 SNLGVGPYSTLTLQVPFFGGTQPPAVPK-PRFDFLNSKPPPNYVAGLGRGATGFTT 586
           S+LGVG YST+TL VPF+GGTQPPA+PK P FDF NS PP  YVAGLG G+TGFTT
Sbjct: 61  SDLGVGNYSTITLHVPFYGGTQPPAIPKLPCFDFHNSNPPAKYVAGLGCGSTGFTT 116