BLASTX nr result

ID: Glycyrrhiza24_contig00012354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012354
         (1072 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula]...   590   e-166
ref|XP_003603255.1| Glutamate receptor 2.8 [Medicago truncatula]...   585   e-165
ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinu...   503   e-140
ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinu...   500   e-139
ref|XP_002324368.1| glutamate-gated kainate-type ion channel rec...   494   e-137

>ref|XP_003603256.1| Glutamate receptor 2.8 [Medicago truncatula]
            gi|355492304|gb|AES73507.1| Glutamate receptor 2.8
            [Medicago truncatula]
          Length = 990

 Score =  590 bits (1520), Expect = e-166
 Identities = 286/359 (79%), Positives = 316/359 (88%), Gaps = 2/359 (0%)
 Frame = -2

Query: 1071 NNLGSILWPGDVYSVPKGWEIPTNYGEKLKIGVPVKNGDNYTEFVKITHDPSTNSTMVTG 892
            N+LG I+WPGD+ S+PKGWEIPT  G+KL+IGVPVKNGDNYTEF+ IT D STNST+ TG
Sbjct: 451  NDLGLIMWPGDMNSIPKGWEIPT-IGKKLRIGVPVKNGDNYTEFLHITRDHSTNSTLATG 509

Query: 891  FCIDVFKAVLEVLPYALPYEFIPFAKQNGEMAGTYDEFVSQVYYGNFDAVVGDVTIIANR 712
            FCIDVFKAV+EVLPYALPYEF+PFAK +GEMAGTY++ ++Q+YYGNFDAVVGDVTIIANR
Sbjct: 510  FCIDVFKAVVEVLPYALPYEFVPFAKSDGEMAGTYNDLITQLYYGNFDAVVGDVTIIANR 569

Query: 711  SSYVDFTMPYTESGVTMVVPVKDNRKKNAWAFLKPLTWDLWVTSACFFVFIGFVVWLLEH 532
            S YVDFTMPYTESGVTMVV +KDNRKKNAWAFLKPLTWDLWVT+AC FVFIGFVVW+LEH
Sbjct: 570  SDYVDFTMPYTESGVTMVVLMKDNRKKNAWAFLKPLTWDLWVTTACSFVFIGFVVWVLEH 629

Query: 531  RINNDFRGPPSHQIGTSLWFSFSTMVYAHREKVMSNLGRXXXXXXXXXXXXXVQSYTASL 352
            RIN DFRGP SHQIGTSLWFSFSTMV+A RE+V+SNL R             VQSYTASL
Sbjct: 630  RINKDFRGPTSHQIGTSLWFSFSTMVFAQRERVVSNLARFVVVVWVFVVLILVQSYTASL 689

Query: 351  TSLLTVEQLRPAIADVQQLIKYRMNVGYLKGSFVYGILKDLGFQDSQLMTYQSSEECHEL 172
            TSLLTVEQLRPAI DV QL+K +MNVGYLKGSFVYGILK++ FQD QL+TYQS +EC+EL
Sbjct: 690  TSLLTVEQLRPAITDVNQLLKNKMNVGYLKGSFVYGILKEMNFQDFQLITYQSPKECNEL 749

Query: 171  FTKGSANGGIAAAFDEVPYVSHFLGTYSC--SKYVMIEPRFKTGGFGYAFPKGSPLVAD 1
            F KGSANGGI AAFDEVPYV HFLG YSC  SKY M+EPRFKTGGFGYAFPKGSPLVAD
Sbjct: 750  FIKGSANGGIDAAFDEVPYVKHFLGIYSCSSSKYAMVEPRFKTGGFGYAFPKGSPLVAD 808


>ref|XP_003603255.1| Glutamate receptor 2.8 [Medicago truncatula]
            gi|355492303|gb|AES73506.1| Glutamate receptor 2.8
            [Medicago truncatula]
          Length = 1057

 Score =  585 bits (1508), Expect = e-165
 Identities = 284/357 (79%), Positives = 316/357 (88%)
 Frame = -2

Query: 1071 NNLGSILWPGDVYSVPKGWEIPTNYGEKLKIGVPVKNGDNYTEFVKITHDPSTNSTMVTG 892
            N LGSI+WPGD+YS+PKG EIPT  G+KL+IGVPVKNG NYTEF+K+T+DPSTNST  TG
Sbjct: 524  NVLGSIIWPGDMYSIPKGSEIPT-IGKKLRIGVPVKNGFNYTEFLKVTYDPSTNSTQATG 582

Query: 891  FCIDVFKAVLEVLPYALPYEFIPFAKQNGEMAGTYDEFVSQVYYGNFDAVVGDVTIIANR 712
            F ID+FKAVL+VLPYALPYEF+ FAK +GEMAGTY+E ++Q++ G FDAVVGD+TI A+R
Sbjct: 583  FSIDIFKAVLDVLPYALPYEFVQFAKPDGEMAGTYNELINQLHDGKFDAVVGDITITADR 642

Query: 711  SSYVDFTMPYTESGVTMVVPVKDNRKKNAWAFLKPLTWDLWVTSACFFVFIGFVVWLLEH 532
            S+ VDFTMPYTESGVTMVV +KD+RKKNAWAFLKPLTWDLWVTSAC FVFIGFVVW+LEH
Sbjct: 643  SNCVDFTMPYTESGVTMVVSMKDSRKKNAWAFLKPLTWDLWVTSACSFVFIGFVVWVLEH 702

Query: 531  RINNDFRGPPSHQIGTSLWFSFSTMVYAHREKVMSNLGRXXXXXXXXXXXXXVQSYTASL 352
            RINNDFRGP SHQIGTSLWFSFSTMVYAHREKV+SNL R             VQSYTASL
Sbjct: 703  RINNDFRGPLSHQIGTSLWFSFSTMVYAHREKVVSNLARFVVVVWVFVVLILVQSYTASL 762

Query: 351  TSLLTVEQLRPAIADVQQLIKYRMNVGYLKGSFVYGILKDLGFQDSQLMTYQSSEECHEL 172
            TSLLTVEQLRPAI DV QL+K +MNVGYLKGSFV GILKDLGF+DS L+TYQS+EEC+EL
Sbjct: 763  TSLLTVEQLRPAITDVNQLLKNKMNVGYLKGSFVEGILKDLGFEDSYLITYQSAEECNEL 822

Query: 171  FTKGSANGGIAAAFDEVPYVSHFLGTYSCSKYVMIEPRFKTGGFGYAFPKGSPLVAD 1
            F KGS NGGI AAFDEVPY+ HFLGTYSCSKYVM+EPRFKTGGFGYAFPKGSPLVAD
Sbjct: 823  FIKGSVNGGIDAAFDEVPYIKHFLGTYSCSKYVMVEPRFKTGGFGYAFPKGSPLVAD 879


>ref|XP_002515378.1| glutamate receptor 2 plant, putative [Ricinus communis]
            gi|223545322|gb|EEF46827.1| glutamate receptor 2 plant,
            putative [Ricinus communis]
          Length = 931

 Score =  503 bits (1295), Expect = e-140
 Identities = 244/357 (68%), Positives = 278/357 (77%)
 Frame = -2

Query: 1071 NNLGSILWPGDVYSVPKGWEIPTNYGEKLKIGVPVKNGDNYTEFVKITHDPSTNSTMVTG 892
            +NL  ++WPGD  SVPKGWEIPT  G+KL+I VPVK G N  EFVK+T DPSTN+T V G
Sbjct: 411  SNLAPVIWPGDSSSVPKGWEIPTK-GKKLRILVPVKEGFN--EFVKVTRDPSTNTTTVRG 467

Query: 891  FCIDVFKAVLEVLPYALPYEFIPFAKQNGEMAGTYDEFVSQVYYGNFDAVVGDVTIIANR 712
            +CIDVF AV++ LPYA+ YE+ PF   +G  AGTYD+ V QVY G FDAVVGD TIIANR
Sbjct: 468  YCIDVFDAVVKALPYAVTYEYTPFVNPDGSSAGTYDDLVYQVYTGEFDAVVGDTTIIANR 527

Query: 711  SSYVDFTMPYTESGVTMVVPVKDNRKKNAWAFLKPLTWDLWVTSACFFVFIGFVVWLLEH 532
            S YVDFT PYTESGV+M+VP+KDN  KNAW F+KPLTWDLWVTS CFFVFIGFVVW+LEH
Sbjct: 528  SLYVDFTFPYTESGVSMIVPIKDNNSKNAWVFVKPLTWDLWVTSFCFFVFIGFVVWVLEH 587

Query: 531  RINNDFRGPPSHQIGTSLWFSFSTMVYAHREKVMSNLGRXXXXXXXXXXXXXVQSYTASL 352
            RIN DFRGPPSHQ GT+ WFSFSTMV+AHRE+V+SNL R              QSYTASL
Sbjct: 588  RINEDFRGPPSHQAGTAFWFSFSTMVFAHRERVVSNLARLVVIIWCFVVLILTQSYTASL 647

Query: 351  TSLLTVEQLRPAIADVQQLIKYRMNVGYLKGSFVYGILKDLGFQDSQLMTYQSSEECHEL 172
            TSLLTV+QL P + DV QLI    NVGYL+GSFV GILK LGF +S+   Y S+EEC+EL
Sbjct: 648  TSLLTVQQLMPTVTDVHQLISNEDNVGYLQGSFVLGILKGLGFHESKFKVYNSTEECNEL 707

Query: 171  FTKGSANGGIAAAFDEVPYVSHFLGTYSCSKYVMIEPRFKTGGFGYAFPKGSPLVAD 1
            F KG+ NGGIAAAFDEVPY+  FL  Y CSKY M+EP FKTGGFG+ FPK SPLV D
Sbjct: 708  FVKGTRNGGIAAAFDEVPYIKLFLAQY-CSKYTMVEPTFKTGGFGFVFPKRSPLVPD 763


>ref|XP_002515377.1| glutamate receptor 2 plant, putative [Ricinus communis]
            gi|223545321|gb|EEF46826.1| glutamate receptor 2 plant,
            putative [Ricinus communis]
          Length = 961

 Score =  500 bits (1288), Expect = e-139
 Identities = 243/357 (68%), Positives = 279/357 (78%)
 Frame = -2

Query: 1071 NNLGSILWPGDVYSVPKGWEIPTNYGEKLKIGVPVKNGDNYTEFVKITHDPSTNSTMVTG 892
            +NL  ++WPGD  SVPKGWEIPT  G+KL+I VPVK G  ++EFVK+T DPSTN T V G
Sbjct: 435  SNLAPVIWPGDSSSVPKGWEIPTK-GKKLRILVPVKEG--FSEFVKVTRDPSTNITTVRG 491

Query: 891  FCIDVFKAVLEVLPYALPYEFIPFAKQNGEMAGTYDEFVSQVYYGNFDAVVGDVTIIANR 712
            +CIDVF AV++ LPY + YE+IPFA  +G  AGTYD+ V QVY G FDAVVGD TIIANR
Sbjct: 492  YCIDVFDAVVKALPYTVTYEYIPFANPDGSSAGTYDDLVYQVYTGKFDAVVGDTTIIANR 551

Query: 711  SSYVDFTMPYTESGVTMVVPVKDNRKKNAWAFLKPLTWDLWVTSACFFVFIGFVVWLLEH 532
            S YVDFT PYTESGV+M+VP+KDN  KNAW FLKPLTWDLWVTS CFFVFIGFVVW+LEH
Sbjct: 552  SLYVDFTFPYTESGVSMIVPIKDNNSKNAWVFLKPLTWDLWVTSFCFFVFIGFVVWVLEH 611

Query: 531  RINNDFRGPPSHQIGTSLWFSFSTMVYAHREKVMSNLGRXXXXXXXXXXXXXVQSYTASL 352
            RIN DFRGPPSHQ GT+ WFSFSTMV+AHRE+V+SNL R              QSYTASL
Sbjct: 612  RINQDFRGPPSHQAGTAFWFSFSTMVFAHRERVVSNLARSVVIIWCFVVLILTQSYTASL 671

Query: 351  TSLLTVEQLRPAIADVQQLIKYRMNVGYLKGSFVYGILKDLGFQDSQLMTYQSSEECHEL 172
            TSLLTV+QL P + DV QLI    NVGYL+GSFV GILK LGF +S+L  Y+S+EEC+EL
Sbjct: 672  TSLLTVQQLMPTVTDVHQLISNEDNVGYLQGSFVLGILKGLGFHESRLKVYKSTEECNEL 731

Query: 171  FTKGSANGGIAAAFDEVPYVSHFLGTYSCSKYVMIEPRFKTGGFGYAFPKGSPLVAD 1
            F KG+ NGGI AAF+EVPY+  FL  Y CSKY M+EP FKTGGFG+ FPK S LV D
Sbjct: 732  FVKGTRNGGITAAFEEVPYIKLFLAQY-CSKYTMVEPTFKTGGFGFVFPKRSLLVPD 787


>ref|XP_002324368.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
            [Populus trichocarpa] gi|222865802|gb|EEF02933.1|
            glutamate-gated kainate-type ion channel receptor subunit
            GluR5 [Populus trichocarpa]
          Length = 885

 Score =  494 bits (1273), Expect = e-137
 Identities = 237/357 (66%), Positives = 284/357 (79%)
 Frame = -2

Query: 1071 NNLGSILWPGDVYSVPKGWEIPTNYGEKLKIGVPVKNGDNYTEFVKITHDPSTNSTMVTG 892
            ++L +++WPGD  SVPKGWEIPTN G+KL+IGVPVK+G  ++EFVK+T DPS+N+  VTG
Sbjct: 407  SDLSTVIWPGDTTSVPKGWEIPTN-GKKLRIGVPVKDG--FSEFVKVTRDPSSNTKTVTG 463

Query: 891  FCIDVFKAVLEVLPYALPYEFIPFAKQNGEMAGTYDEFVSQVYYGNFDAVVGDVTIIANR 712
            + IDVF +V++ LPYALPYE+IPFAK +GE AGTY++ + QVY  NFDAVVGD TI+ NR
Sbjct: 464  YSIDVFDSVVKALPYALPYEYIPFAKPDGETAGTYNDLIYQVYLKNFDAVVGDTTIVFNR 523

Query: 711  SSYVDFTMPYTESGVTMVVPVKDNRKKNAWAFLKPLTWDLWVTSACFFVFIGFVVWLLEH 532
            S YVDFT+PYTESGV+M+VP+ DN  KNAW FL+PLTWDLWVTS CFF+FIGFV+W+LEH
Sbjct: 524  SQYVDFTLPYTESGVSMIVPIVDNNSKNAWVFLRPLTWDLWVTSFCFFIFIGFVIWILEH 583

Query: 531  RINNDFRGPPSHQIGTSLWFSFSTMVYAHREKVMSNLGRXXXXXXXXXXXXXVQSYTASL 352
            RIN DFRGP  HQ GTS WFSFSTMV+A RE V+SNL R              QSYTASL
Sbjct: 584  RINEDFRGPALHQAGTSFWFSFSTMVFAQREIVVSNLSRAVVLIWCFVVLILTQSYTASL 643

Query: 351  TSLLTVEQLRPAIADVQQLIKYRMNVGYLKGSFVYGILKDLGFQDSQLMTYQSSEECHEL 172
            TSLLTV+QLRP + DV +LIK    VGY +GSFV GIL DLGF +S+L+ Y S+E+C +L
Sbjct: 644  TSLLTVQQLRPTVTDVHELIKKGEYVGYQEGSFVLGILLDLGFDESKLIVYNSTEQCDDL 703

Query: 171  FTKGSANGGIAAAFDEVPYVSHFLGTYSCSKYVMIEPRFKTGGFGYAFPKGSPLVAD 1
             +KGS NGGIAAAFDEVPY+  FL  Y CSKY MI+P FKT GFG+AFPKGSPLV D
Sbjct: 704  LSKGSGNGGIAAAFDEVPYMRLFLSKY-CSKYAMIDPTFKTDGFGFAFPKGSPLVPD 759


Top