BLASTX nr result

ID: Glycyrrhiza24_contig00012315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012315
         (1264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   649   0.0  
ref|XP_003625193.1| Polygalacturonase [Medicago truncatula] gi|3...   643   0.0  
ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|2...   556   e-156
ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   527   e-147
ref|XP_004136584.1| PREDICTED: exo-poly-alpha-D-galacturonosidas...   525   e-147

>ref|XP_003554187.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Glycine max]
          Length = 466

 Score =  649 bits (1673), Expect = 0.0
 Identities = 308/359 (85%), Positives = 332/359 (92%)
 Frame = -3

Query: 1262 ESWRWYVVVAENATXXXXXXXXXXXGQAEKFVVRQDPRKNVMVSWNHTGACLGDECRPRL 1083
            ESWRWYVVVAENAT           GQA KFVVR+DPRKNVMVSWN TGACLGDECRPRL
Sbjct: 107  ESWRWYVVVAENATDVGIRGGGAVDGQAAKFVVREDPRKNVMVSWNQTGACLGDECRPRL 166

Query: 1082 IGFIGCNNVRVSNITLNQPAYWCLHLVRSESISIQDVAIYGDLNIPNNDGIDIEDSNNTV 903
            IGF+ CNNV+VSNITLNQPAYWCLHLVRS +I IQD+AIYGD NIPNNDGIDIEDSNNTV
Sbjct: 167  IGFLDCNNVQVSNITLNQPAYWCLHLVRSNNICIQDIAIYGDFNIPNNDGIDIEDSNNTV 226

Query: 902  ITRCHIDTGDDAICPKTSTGPVFNLTVSNCWIRSKSSAIKLGSASWFVFKHFVFDNITIV 723
            ITRCHIDTGDDAICPK+STGPV+NLTV++CWIRSKSSAIKLGSASWF FKHFVFDNI IV
Sbjct: 227  ITRCHIDTGDDAICPKSSTGPVYNLTVTDCWIRSKSSAIKLGSASWFDFKHFVFDNIAIV 286

Query: 722  DSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPSWWGRAEPIYVTTCPRNSTSKEASISN 543
            DSHRGIGFQIRDGGNVSDIVFSN+NISTRYYD  WWGRAEPIYVT+CPR+S+SKEASISN
Sbjct: 287  DSHRGIGFQIRDGGNVSDIVFSNMNISTRYYDSLWWGRAEPIYVTSCPRDSSSKEASISN 346

Query: 542  ILFINITADSENGIFLSGSKRGLLRNLRFINMNITYRRFTSYAGGLVDYRPGCQELVKHE 363
            +LFINITA+SENGIFLSGSKRGLLRNLRFI+M+ITYRRFT+YAGGL+DYRPGCQELVKH 
Sbjct: 347  VLFINITANSENGIFLSGSKRGLLRNLRFIDMDITYRRFTNYAGGLLDYRPGCQELVKHR 406

Query: 362  TAGMMMEHIEGLEVKNVEMRWETNQIEQWNNPMEFRPSTVNNIHFSNFNSVLYTNSKSS 186
            TAG+MMEHIEGLEVKNVEMRW  +Q+EQWNNP+EFRPSTVNNI F NFNS LYTNSKS+
Sbjct: 407  TAGIMMEHIEGLEVKNVEMRWSNDQLEQWNNPLEFRPSTVNNISFLNFNSGLYTNSKSN 465


>ref|XP_003625193.1| Polygalacturonase [Medicago truncatula] gi|355500208|gb|AES81411.1|
            Polygalacturonase [Medicago truncatula]
          Length = 482

 Score =  643 bits (1658), Expect = 0.0
 Identities = 307/359 (85%), Positives = 328/359 (91%)
 Frame = -3

Query: 1262 ESWRWYVVVAENATXXXXXXXXXXXGQAEKFVVRQDPRKNVMVSWNHTGACLGDECRPRL 1083
            ES RWYVV+AENAT           GQAEKFVVR + RKNVMVSWN TG CLGDECRPRL
Sbjct: 123  ESSRWYVVLAENATDVGIAGGGVVDGQAEKFVVRYNERKNVMVSWNQTGDCLGDECRPRL 182

Query: 1082 IGFIGCNNVRVSNITLNQPAYWCLHLVRSESISIQDVAIYGDLNIPNNDGIDIEDSNNTV 903
            IGF+GC NV+V N+TLNQPAYWCLHLVRSE+I+IQD+AIYGDLNIPNNDGIDIEDSNNTV
Sbjct: 183  IGFLGCKNVKVFNVTLNQPAYWCLHLVRSENITIQDIAIYGDLNIPNNDGIDIEDSNNTV 242

Query: 902  ITRCHIDTGDDAICPKTSTGPVFNLTVSNCWIRSKSSAIKLGSASWFVFKHFVFDNITIV 723
            ITRCHIDTGDDAICPK+STGPV NLTV+N WIRSKSSAIK GSASWF FKHFVFDNITIV
Sbjct: 243  ITRCHIDTGDDAICPKSSTGPVHNLTVTNSWIRSKSSAIKFGSASWFEFKHFVFDNITIV 302

Query: 722  DSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPSWWGRAEPIYVTTCPRNSTSKEASISN 543
            DSHRG+ FQIRDGGNVSDIVFSNI ISTRYYDP WWGRAEPIYVTTCPR+STSKEASISN
Sbjct: 303  DSHRGLAFQIRDGGNVSDIVFSNIKISTRYYDPLWWGRAEPIYVTTCPRDSTSKEASISN 362

Query: 542  ILFINITADSENGIFLSGSKRGLLRNLRFINMNITYRRFTSYAGGLVDYRPGCQELVKHE 363
            + FINITA+SENGIFLSGSKRGLLRNL FINMNITYRRFTSYAGG  DYRPGCQELVKH+
Sbjct: 363  VHFINITANSENGIFLSGSKRGLLRNLSFINMNITYRRFTSYAGGFFDYRPGCQELVKHK 422

Query: 362  TAGMMMEHIEGLEVKNVEMRWETNQIEQWNNPMEFRPSTVNNIHFSNFNSVLYTNSKSS 186
            TAG+MMEHIEGLEV+NVEMRWE N +EQWNNPMEF+PSTVNNIHFSNFNSV+Y+NSKSS
Sbjct: 423  TAGIMMEHIEGLEVRNVEMRWEKNDLEQWNNPMEFKPSTVNNIHFSNFNSVVYSNSKSS 481


>ref|XP_002322693.1| predicted protein [Populus trichocarpa] gi|222867323|gb|EEF04454.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  556 bits (1434), Expect = e-156
 Identities = 261/350 (74%), Positives = 296/350 (84%)
 Frame = -3

Query: 1253 RWYVVVAENATXXXXXXXXXXXGQAEKFVVRQDPRKNVMVSWNHTGACLGDECRPRLIGF 1074
            RWYVV+AENA+           GQ  KFV R + RKNVMVSWN TGACLGDECRPRL+GF
Sbjct: 93   RWYVVLAENASDVGITGGGVVDGQGLKFVKRFNERKNVMVSWNSTGACLGDECRPRLVGF 152

Query: 1073 IGCNNVRVSNITLNQPAYWCLHLVRSESISIQDVAIYGDLNIPNNDGIDIEDSNNTVITR 894
            IGC NV+V N+ L++PAYWCLH+V+  +  I DV+IYGD N PNNDGIDIEDSNNT+ITR
Sbjct: 153  IGCTNVKVWNVRLSEPAYWCLHIVQCLNTHISDVSIYGDFNSPNNDGIDIEDSNNTLITR 212

Query: 893  CHIDTGDDAICPKTSTGPVFNLTVSNCWIRSKSSAIKLGSASWFVFKHFVFDNITIVDSH 714
            CHIDTGDDAICPKT TGP++NLT ++CWIR+KSSAIKLGSASWF FK  VFDNITIVDSH
Sbjct: 213  CHIDTGDDAICPKTYTGPIYNLTATDCWIRTKSSAIKLGSASWFEFKGLVFDNITIVDSH 272

Query: 713  RGIGFQIRDGGNVSDIVFSNINISTRYYDPSWWGRAEPIYVTTCPRNSTSKEASISNILF 534
            RG+G QIRDGGNVSDI FSNINISTRYYDPSWWGRAEPIYVTTCPR+S+SKE SISN+ F
Sbjct: 273  RGLGLQIRDGGNVSDITFSNINISTRYYDPSWWGRAEPIYVTTCPRHSSSKEGSISNLQF 332

Query: 533  INITADSENGIFLSGSKRGLLRNLRFINMNITYRRFTSYAGGLVDYRPGCQELVKHETAG 354
            INIT +SENG+FLSGSK GLL NLRFINMN+T+RR+T+Y GGLVDYRPGCQ LV H  AG
Sbjct: 333  INITTNSENGVFLSGSKGGLLSNLRFINMNLTFRRWTTYPGGLVDYRPGCQGLVNHSAAG 392

Query: 353  MMMEHIEGLEVKNVEMRWETNQIEQWNNPMEFRPSTVNNIHFSNFNSVLY 204
            ++MEHIEG EV+NV MRW   Q E W+NP++FRPSTVNNI F NF+S LY
Sbjct: 393  IIMEHIEGFEVENVNMRWSDYQNEPWDNPLDFRPSTVNNISFLNFHSALY 442


>ref|XP_004161486.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis sativus]
          Length = 463

 Score =  527 bits (1358), Expect = e-147
 Identities = 248/351 (70%), Positives = 287/351 (81%), Gaps = 1/351 (0%)
 Frame = -3

Query: 1262 ESWRWYVVVAENATXXXXXXXXXXXGQAEKFVVRQDPRKNVMVSWNHTGACLGDECRPRL 1083
            +S RW+ VVAENA+           GQ  KFV + D RKNVMVSWN TGAC GDECRP L
Sbjct: 108  DSSRWFAVVAENASDVGISGGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDL 167

Query: 1082 IGFIGCNNVRVSNITLNQPAYWCLHLVRSESISIQDVAIYGDLNIPNNDGIDIEDSNNTV 903
            +GFIG N VRVSN++ NQPA+WCLHLVR E+  I+DV+IYGD + PNNDGIDIEDSNNT+
Sbjct: 168  VGFIGSNKVRVSNVSFNQPAHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTL 227

Query: 902  ITRCHIDTGDDAICPKTSTGPVFNLTVSNCWIRSKSSAIKLGSASWFVFKHFVFDNITIV 723
            ITRC IDTGDDAICPK+S GPVFNLT +NCWIR+KSSAIKLGSASWF F   +FDN+TIV
Sbjct: 228  ITRCRIDTGDDAICPKSSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTIV 287

Query: 722  DSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPSWWGRAEPIYVTTCPRNSTSKEASISN 543
            DSHRG+ FQ+RDGG+ +DI FSNINI+TRYYDPSWWGRAEPIYVTTCPR+  SKE SISN
Sbjct: 288  DSHRGLAFQLRDGGSANDITFSNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISN 347

Query: 542  ILFINITADSENGIFLSGSKRGLLRNLRFINMNITYRRFTSYAGGLVDYRPGCQELVKHE 363
            I FINITA SENG+FLSGSK G+L NLRF N+ + Y+R+T Y GG+ DYRPGCQ  VKH 
Sbjct: 348  IRFINITATSENGVFLSGSKSGVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHG 407

Query: 362  TAGMMMEHIEGLEVKNVEMRW-ETNQIEQWNNPMEFRPSTVNNIHFSNFNS 213
             AGM+MEHIEGL ++NV+M W +TN   QWNNP++FRPSTVNNI F NF+S
Sbjct: 408  MAGMIMEHIEGLNLENVDMHWFDTNGSLQWNNPLDFRPSTVNNISFFNFHS 458


>ref|XP_004136584.1| PREDICTED: exo-poly-alpha-D-galacturonosidase-like [Cucumis sativus]
          Length = 463

 Score =  525 bits (1353), Expect = e-147
 Identities = 247/351 (70%), Positives = 286/351 (81%), Gaps = 1/351 (0%)
 Frame = -3

Query: 1262 ESWRWYVVVAENATXXXXXXXXXXXGQAEKFVVRQDPRKNVMVSWNHTGACLGDECRPRL 1083
            +S RW+ VVAENA+           GQ  KFV + D RKNVMVSWN TGAC GDECRP L
Sbjct: 108  DSSRWFAVVAENASDVGISGGGTVDGQGLKFVEKFDKRKNVMVSWNKTGACYGDECRPDL 167

Query: 1082 IGFIGCNNVRVSNITLNQPAYWCLHLVRSESISIQDVAIYGDLNIPNNDGIDIEDSNNTV 903
            +GFIG N VRVSN++ NQPA+WCLHLVR E+  I+DV+IYGD + PNNDGIDIEDSNNT+
Sbjct: 168  VGFIGSNKVRVSNVSFNQPAHWCLHLVRCENTVIEDVSIYGDFDTPNNDGIDIEDSNNTL 227

Query: 902  ITRCHIDTGDDAICPKTSTGPVFNLTVSNCWIRSKSSAIKLGSASWFVFKHFVFDNITIV 723
            ITRC IDTGDDAICPK+S GPVFNLT +NCWIR+KSSAIKLGSASWF F   +FDN+TIV
Sbjct: 228  ITRCRIDTGDDAICPKSSNGPVFNLTATNCWIRTKSSAIKLGSASWFNFTRMLFDNLTIV 287

Query: 722  DSHRGIGFQIRDGGNVSDIVFSNINISTRYYDPSWWGRAEPIYVTTCPRNSTSKEASISN 543
            DSHRG+ FQ+RDGG+ +DI FSNINI+TRYYDPSWWGRAEPIYVTTCPR+  SKE SISN
Sbjct: 288  DSHRGLAFQLRDGGSANDITFSNINITTRYYDPSWWGRAEPIYVTTCPRDPGSKEGSISN 347

Query: 542  ILFINITADSENGIFLSGSKRGLLRNLRFINMNITYRRFTSYAGGLVDYRPGCQELVKHE 363
            I F NITA SENG+FLSGSK G+L NLRF N+ + Y+R+T Y GG+ DYRPGCQ  VKH 
Sbjct: 348  IRFTNITATSENGVFLSGSKSGVLSNLRFTNVKLRYKRWTKYGGGIADYRPGCQGFVKHG 407

Query: 362  TAGMMMEHIEGLEVKNVEMRW-ETNQIEQWNNPMEFRPSTVNNIHFSNFNS 213
             AGM+MEHIEGL ++NV+M W +TN   QWNNP++FRPSTVNNI F NF+S
Sbjct: 408  MAGMIMEHIEGLNLENVDMHWFDTNGSLQWNNPLDFRPSTVNNISFLNFHS 458


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