BLASTX nr result

ID: Glycyrrhiza24_contig00012311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012311
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520022.1| PREDICTED: dof zinc finger protein DOF3.6-li...   109   3e-22
ref|XP_003621892.1| Dof zinc finger protein [Medicago truncatula...   107   1e-21
ref|XP_003559235.1| PREDICTED: uncharacterized protein LOC100837...    99   3e-19
ref|XP_002332583.1| f-box family protein [Populus trichocarpa] g...    98   6e-19
ref|XP_003604971.1| Dof zinc finger protein [Medicago truncatula...    97   1e-18

>ref|XP_003520022.1| PREDICTED: dof zinc finger protein DOF3.6-like [Glycine max]
          Length = 371

 Score =  109 bits (272), Expect = 3e-22
 Identities = 71/149 (47%), Positives = 87/149 (58%), Gaps = 6/149 (4%)
 Frame = -2

Query: 430 NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRS--SSTTKYRPIKLPXXXXXXX 257
           NYSLSQPRHFCKTCRRYWTRGGALR+VPVGGGCRRNKR+  +S     P+K         
Sbjct: 97  NYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRNKGNSARSKSPMK--------- 147

Query: 256 XXXXXXXXXGCITTINNSSDVNNNVLMGGGHLP---TTHQFPFLTSSLQHHHHYYNNNGD 86
                          ++S    ++V+M   HLP   T  QFPFL S   HH++    +G 
Sbjct: 148 --------PSASANSSSSGCTPDHVMM--THLPTPITPTQFPFLAS--LHHYNGDYVSGG 195

Query: 85  FGSRFGATNPTSSLVAKNIGNGSAH-EFQ 2
            GS FGA   T+ LVA+N GN ++  EFQ
Sbjct: 196 IGSHFGAI--TTPLVARNNGNNTSDVEFQ 222


>ref|XP_003621892.1| Dof zinc finger protein [Medicago truncatula]
           gi|355496907|gb|AES78110.1| Dof zinc finger protein
           [Medicago truncatula]
          Length = 373

 Score =  107 bits (266), Expect = 1e-21
 Identities = 64/146 (43%), Positives = 87/146 (59%), Gaps = 7/146 (4%)
 Frame = -2

Query: 430 NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRN--KRSSSTTKYRPIKLPXXXXXXX 257
           NY+LSQPRHFCKTCRRYWT+GGALRNVPVGGGCRRN  +R  ++    P+K P       
Sbjct: 94  NYNLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRRNNKRRKGNSVSKSPLK-PNHNDHLQ 152

Query: 256 XXXXXXXXXGCITTINNSSD---VNNNVLMGGGHLPTTHQFPFLTSSLQHHHHYYNNNGD 86
                        + N+SS+    N+NV +G  + PT  QFPF+TS  +H+ + Y + G 
Sbjct: 153 IGTGAAAGGSSSASANSSSNNGCTNSNVNIGMPNFPT--QFPFVTSLHRHNDNSYASEG- 209

Query: 85  FGSRF--GATNPTSSLVAKNIGNGSA 14
            GS      +N T++ V   +G+GS+
Sbjct: 210 IGSLLAKNMSNSTTTNVEFQLGSGSS 235


>ref|XP_003559235.1| PREDICTED: uncharacterized protein LOC100837426 [Brachypodium
           distachyon]
          Length = 460

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/103 (48%), Positives = 60/103 (58%)
 Frame = -2

Query: 430 NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSSSTTKYRPIKLPXXXXXXXXX 251
           NYSL+QPRHFCK CRRYWTRGGALRNVPVGGGCRRNKRSS ++K                
Sbjct: 151 NYSLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKRSSKSSK----------SSSSSS 200

Query: 250 XXXXXXXGCITTINNSSDVNNNVLMGGGHLPTTHQFPFLTSSL 122
                    + T ++SS   ++   G G +P   Q PF  +SL
Sbjct: 201 AAACGVAAGVNTSSSSSATTSSATTGSGIMPALGQMPFFAASL 243


>ref|XP_002332583.1| f-box family protein [Populus trichocarpa]
           gi|222832921|gb|EEE71398.1| f-box family protein
           [Populus trichocarpa]
          Length = 337

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 61/144 (42%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
 Frame = -2

Query: 430 NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSSSTTKYR-PIKLPXXXXXXXX 254
           NYSL+QPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRS  + + + P+K          
Sbjct: 93  NYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSKGSGRSKSPVKAGSSSSGG-- 150

Query: 253 XXXXXXXXGCITTINNSSDVNNNVLMGGGHLPTTHQFPFLTSSLQHHHHYYNNNGDFGSR 74
                     +++   ++D+  N+      LP    FP L      HH    N+ D G  
Sbjct: 151 ----------LSSNGGTTDITGNMTTPPPLLPI---FPPL------HHLGDYNSPDIGLN 191

Query: 73  FGATNPTSSLVAKNIGNGSAHEFQ 2
           FG   P+   V    G G   EFQ
Sbjct: 192 FGGILPS---VGATAGGGGGVEFQ 212


>ref|XP_003604971.1| Dof zinc finger protein [Medicago truncatula]
           gi|355506026|gb|AES87168.1| Dof zinc finger protein
           [Medicago truncatula]
          Length = 404

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 59/127 (46%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
 Frame = -2

Query: 430 NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSS-STTKYRPIKLPXXXXXXXX 254
           NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG RRNKRSS S+      K P        
Sbjct: 99  NYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGFRRNKRSSKSSNNGNSTKSPASSDRQTG 158

Query: 253 XXXXXXXXGCITTINNSSDVNNNVLMGGGHLPTTHQFPFLTSSLQHHHHYYNNN-----G 89
                       +  NS   NNN+      L  T Q   L      HH++ N N     G
Sbjct: 159 S----------ASSTNSITSNNNIHSSADILGLTPQMSSLRFMTPLHHNFSNPNDFVGGG 208

Query: 88  DFGSRFG 68
           D G  +G
Sbjct: 209 DLGLNYG 215


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