BLASTX nr result
ID: Glycyrrhiza24_contig00012306
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00012306
(481 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-l... 290 6e-77
ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-l... 290 6e-77
ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylat... 272 2e-71
emb|CBI29360.3| unnamed protein product [Vitis vinifera] 272 2e-71
emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera] 271 3e-71
>ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 290 bits (743), Expect = 6e-77
Identities = 142/160 (88%), Positives = 152/160 (95%)
Frame = -2
Query: 480 YDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRIMFS 301
YDLFSQVAQ+ SIRVCRDQT+RSSLGYAYVNFANAQDA+NA EL+NFTPLNGKPIRIMFS
Sbjct: 52 YDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMELLNFTPLNGKPIRIMFS 111
Query: 300 QRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFVQFE 121
QRDPSIRKSG+ NVFIKNLD SIDNKALHDTFAAFGTVLSCKVALD SGQSKGYGFVQF+
Sbjct: 112 QRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYGFVQFD 171
Query: 120 NEDAAQSAIKQLNGMLINDKQVYVGLFVRHQERAQANGSP 1
NE+AAQ+AIK+LNGMLINDKQVYVGLF+R QER Q NGSP
Sbjct: 172 NEEAAQNAIKRLNGMLINDKQVYVGLFIRRQEREQTNGSP 211
Score = 96.3 bits (238), Expect = 2e-18
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Frame = -2
Query: 474 LFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRIMF--- 304
LF + S V +D +S + +VNF N AA A E +N T +N R+++
Sbjct: 233 LFGPYGTITSATVMKDVNGKSRC-FGFVNFQNPDSAAAAVERLNGTTINND--RVLYVGR 289
Query: 303 ----SQRDPSIR------------KSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKV 172
++R+ ++ K AN+++KNLD S ++ L D F+ FGT+ SCKV
Sbjct: 290 AQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKV 349
Query: 171 ALDGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVRHQER 22
+D +G+SKG GFV F + A A+ ++NG LI K +YV + R +ER
Sbjct: 350 MIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVAQRKEER 399
Score = 92.8 bits (229), Expect = 3e-17
Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 5/158 (3%)
Frame = -2
Query: 480 YDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRI-MF 304
+D F+ V+S +V D + +S GY +V F N + A NA + +N +N K + + +F
Sbjct: 140 HDTFAAFGTVLSCKVALDSSGQSK-GYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLF 198
Query: 303 SQRDPSIRKSG---YANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGF 133
+R + +G + NV++KNL + ++ L F +GT+ S V D +G+S+ +GF
Sbjct: 199 IRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGF 258
Query: 132 VQFENEDAAQSAIKQLNGMLI-NDKQVYVGLFVRHQER 22
V F+N D+A +A+++LNG I ND+ +YVG R ER
Sbjct: 259 VNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRKAER 296
>ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 290 bits (743), Expect = 6e-77
Identities = 142/160 (88%), Positives = 152/160 (95%)
Frame = -2
Query: 480 YDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRIMFS 301
YDLFSQVAQ+ SIRVCRDQT+RSSLGYAYVNFANAQDA+NA EL+NFTPLNGKPIRIMFS
Sbjct: 52 YDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMELLNFTPLNGKPIRIMFS 111
Query: 300 QRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFVQFE 121
QRDPSIRKSG+ NVFIKNLD SIDNKALHDTFAAFGTVLSCKVALD SGQSKGYGFVQF+
Sbjct: 112 QRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGYGFVQFD 171
Query: 120 NEDAAQSAIKQLNGMLINDKQVYVGLFVRHQERAQANGSP 1
NE+AAQ+AIK+LNGMLINDKQVYVGLF+R QER Q NGSP
Sbjct: 172 NEEAAQNAIKRLNGMLINDKQVYVGLFIRRQEREQTNGSP 211
Score = 96.3 bits (238), Expect = 2e-18
Identities = 58/170 (34%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Frame = -2
Query: 474 LFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRIMF--- 304
LF + S V +D +S + +VNF N AA A E +N T +N R+++
Sbjct: 233 LFGPYGTITSATVMKDVNGKSRC-FGFVNFQNPDSAAAAVERLNGTTINND--RVLYVGR 289
Query: 303 ----SQRDPSIR------------KSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKV 172
++R+ ++ K AN+++KNLD S ++ L D F+ FGT+ SCKV
Sbjct: 290 AQRKAEREAELKAKIEQERISRYEKLQGANLYLKNLDDSFSDEKLKDLFSEFGTITSCKV 349
Query: 171 ALDGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVRHQER 22
+D +G+SKG GFV F + A A+ ++NG LI K +YV + R +ER
Sbjct: 350 MIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAVAQRKEER 399
Score = 92.8 bits (229), Expect = 3e-17
Identities = 55/158 (34%), Positives = 92/158 (58%), Gaps = 5/158 (3%)
Frame = -2
Query: 480 YDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRI-MF 304
+D F+ V+S +V D + +S GY +V F N + A NA + +N +N K + + +F
Sbjct: 140 HDTFAAFGTVLSCKVALDSSGQSK-GYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLF 198
Query: 303 SQRDPSIRKSG---YANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGF 133
+R + +G + NV++KNL + ++ L F +GT+ S V D +G+S+ +GF
Sbjct: 199 IRRQEREQTNGSPKFTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGF 258
Query: 132 VQFENEDAAQSAIKQLNGMLI-NDKQVYVGLFVRHQER 22
V F+N D+A +A+++LNG I ND+ +YVG R ER
Sbjct: 259 VNFQNPDSAAAAVERLNGTTINNDRVLYVGRAQRKAER 296
>ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 272 bits (696), Expect = 2e-71
Identities = 135/160 (84%), Positives = 146/160 (91%)
Frame = -2
Query: 480 YDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRIMFS 301
YDLF QVA V+SIRVCRDQ RR+SLGYAYVNFA+ QDA NA E +NFTPLNGKPIRIMFS
Sbjct: 490 YDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALEHLNFTPLNGKPIRIMFS 549
Query: 300 QRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFVQFE 121
RDPSIRKSG+ANVFIKNLD SIDNKAL DTFAAFGTVLSCK+ALD +GQSKGYGFVQFE
Sbjct: 550 HRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFE 609
Query: 120 NEDAAQSAIKQLNGMLINDKQVYVGLFVRHQERAQANGSP 1
E+AAQ+AIK+LNGMLINDKQVYVGLFVRHQER + NGSP
Sbjct: 610 QEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNRGNGSP 649
Score = 88.2 bits (217), Expect = 6e-16
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Frame = -2
Query: 477 DLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLN-------GKP 319
++F + + S V RD + S + +VNF ++ AA A E +N N GK
Sbjct: 670 NIFGKYGSITSAVVMRDASGMSKC-FGFVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKA 728
Query: 318 ---------IRIMFSQ-RDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVA 169
+R F Q R K N+++KNLD S++++ L + F+ FGT+ SCKV
Sbjct: 729 QRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVM 788
Query: 168 LDGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVRHQER 22
LD G SKG GFV F + A A+ +NG +I K +YV + R +ER
Sbjct: 789 LDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEER 837
Score = 87.8 bits (216), Expect = 8e-16
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 5/157 (3%)
Frame = -2
Query: 477 DLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRI-MFS 301
D F+ V+S ++ D +S GY +V F + A NA + +N +N K + + +F
Sbjct: 579 DTFAAFGTVLSCKIALDNNGQSK-GYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFV 637
Query: 300 QRDPSIRKSG---YANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFV 130
+ R +G + NV++KNL + + L + F +G++ S V D SG SK +GFV
Sbjct: 638 RHQERNRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFV 697
Query: 129 QFENEDAAQSAIKQLNGMLINDKQV-YVGLFVRHQER 22
F++ D+A +A++ LNG ND +V YVG R ER
Sbjct: 698 NFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSER 734
>emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 272 bits (696), Expect = 2e-71
Identities = 135/160 (84%), Positives = 146/160 (91%)
Frame = -2
Query: 480 YDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRIMFS 301
YDLF QVA V+SIRVCRDQ RR+SLGYAYVNFA+ QDA NA E +NFTPLNGKPIRIMFS
Sbjct: 30 YDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALEHLNFTPLNGKPIRIMFS 89
Query: 300 QRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFVQFE 121
RDPSIRKSG+ANVFIKNLD SIDNKAL DTFAAFGTVLSCK+ALD +GQSKGYGFVQFE
Sbjct: 90 HRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFE 149
Query: 120 NEDAAQSAIKQLNGMLINDKQVYVGLFVRHQERAQANGSP 1
E+AAQ+AIK+LNGMLINDKQVYVGLFVRHQER + NGSP
Sbjct: 150 QEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNRGNGSP 189
Score = 88.2 bits (217), Expect = 6e-16
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Frame = -2
Query: 477 DLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLN-------GKP 319
++F + + S V RD + S + +VNF ++ AA A E +N N GK
Sbjct: 210 NIFGKYGSITSAVVMRDASGMSKC-FGFVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKA 268
Query: 318 ---------IRIMFSQ-RDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVA 169
+R F Q R K N+++KNLD S++++ L + F+ FGT+ SCKV
Sbjct: 269 QRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVNDEKLKELFSEFGTITSCKVM 328
Query: 168 LDGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVRHQER 22
LD G SKG GFV F + A A+ +NG +I K +YV + R +ER
Sbjct: 329 LDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEER 377
Score = 87.8 bits (216), Expect = 8e-16
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 5/157 (3%)
Frame = -2
Query: 477 DLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRI-MFS 301
D F+ V+S ++ D +S GY +V F + A NA + +N +N K + + +F
Sbjct: 119 DTFAAFGTVLSCKIALDNNGQSK-GYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFV 177
Query: 300 QRDPSIRKSG---YANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFV 130
+ R +G + NV++KNL + + L + F +G++ S V D SG SK +GFV
Sbjct: 178 RHQERNRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFV 237
Query: 129 QFENEDAAQSAIKQLNGMLINDKQV-YVGLFVRHQER 22
F++ D+A +A++ LNG ND +V YVG R ER
Sbjct: 238 NFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSER 274
>emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 271 bits (694), Expect = 3e-71
Identities = 135/160 (84%), Positives = 145/160 (90%)
Frame = -2
Query: 480 YDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRIMFS 301
YDLF QVA V+SIRVCRDQ RR+SLGYAYVNFA+ QDA NA E +NFTPLNGKPIRIMFS
Sbjct: 56 YDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALEHLNFTPLNGKPIRIMFS 115
Query: 300 QRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFVQFE 121
RDPSIRKSG+ANVFIKNLD SIDNKAL DTFAAFGTVLSCK+ALD +GQSKGYGFVQFE
Sbjct: 116 HRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFGTVLSCKIALDNNGQSKGYGFVQFE 175
Query: 120 NEDAAQSAIKQLNGMLINDKQVYVGLFVRHQERAQANGSP 1
E+AAQ+AIK+LNGMLINDKQVYVGLFVRHQER NGSP
Sbjct: 176 QEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNXGNGSP 215
Score = 87.8 bits (216), Expect = 8e-16
Identities = 58/169 (34%), Positives = 86/169 (50%), Gaps = 17/169 (10%)
Frame = -2
Query: 477 DLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLN-------GKP 319
++F + + S V RD + S + +VNF ++ AA A E +N N GK
Sbjct: 236 NIFGKYGSITSAVVMRDASGMSKC-FGFVNFQSSDSAAAAVEHLNGATFNDDKVWYVGKA 294
Query: 318 ---------IRIMFSQ-RDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVA 169
+R F Q R K N+++KNLD S++++ L + F+ FGT+ SCKV
Sbjct: 295 QRKSEREAELRAKFEQERKNKFEKFKGXNLYLKNLDDSVNDEKLXELFSEFGTITSCKVM 354
Query: 168 LDGSGQSKGYGFVQFENEDAAQSAIKQLNGMLINDKQVYVGLFVRHQER 22
LD G SKG GFV F + A A+ +NG +I K +YV + R +ER
Sbjct: 355 LDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQRKEER 403
Score = 86.3 bits (212), Expect = 2e-15
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 5/157 (3%)
Frame = -2
Query: 477 DLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAKELMNFTPLNGKPIRI---- 310
D F+ V+S ++ D +S GY +V F + A NA + +N +N K + +
Sbjct: 145 DTFAAFGTVLSCKIALDNNGQSK-GYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFV 203
Query: 309 MFSQRDPSIRKSGYANVFIKNLDMSIDNKALHDTFAAFGTVLSCKVALDGSGQSKGYGFV 130
+R+ + NV++KNL + + L + F +G++ S V D SG SK +GFV
Sbjct: 204 RHQERNXGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFV 263
Query: 129 QFENEDAAQSAIKQLNGMLINDKQV-YVGLFVRHQER 22
F++ D+A +A++ LNG ND +V YVG R ER
Sbjct: 264 NFQSSDSAAAAVEHLNGATFNDDKVWYVGKAQRKSER 300