BLASTX nr result

ID: Glycyrrhiza24_contig00012294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012294
         (1573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK46238.1| unknown [Medicago truncatula]                          582   e-163
gb|AFK36185.1| unknown [Lotus japonicus]                              581   e-163
ref|XP_003522838.1| PREDICTED: COP9 signalosome complex subunit ...   580   e-163
ref|XP_003527566.1| PREDICTED: COP9 signalosome complex subunit ...   567   e-159
ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit ...   538   e-150

>gb|AFK46238.1| unknown [Medicago truncatula]
          Length = 318

 Score =  582 bits (1499), Expect = e-163
 Identities = 291/318 (91%), Positives = 300/318 (94%), Gaps = 1/318 (0%)
 Frame = -1

Query: 1378 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNNTAPNGGDGVVSPLPP-RVY 1202
            MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNN   NGGDGVVS LPP RV+
Sbjct: 1    MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNNATNNGGDGVVSSLPPPRVF 60

Query: 1201 GCVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDA 1022
            GCVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDA
Sbjct: 61   GCVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDA 120

Query: 1021 QESDMHIHRALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVHSSYT 842
            +ESDMHIH+ALMDINESPVYVLLNP+INHSQKDLPVSIFESELHVIDGIPQLIFV SSYT
Sbjct: 121  EESDMHIHKALMDINESPVYVLLNPAINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYT 180

Query: 841  IETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKG 662
            IETVEAERISVDHVAHLKPSDGGSAATQLAA+LTGIHSAIKMLHSRIKVLHHYLLAM+KG
Sbjct: 181  IETVEAERISVDHVAHLKPSDGGSAATQLAANLTGIHSAIKMLHSRIKVLHHYLLAMEKG 240

Query: 661  DVPCENXXXXXXXXXXXXLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNDLVDK 482
            DVPCEN            LPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNDLVDK
Sbjct: 241  DVPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNDLVDK 300

Query: 481  FNTAYDRHSRRGGRTAFL 428
            F+TAYDRH+RRGGRTAF+
Sbjct: 301  FSTAYDRHTRRGGRTAFM 318


>gb|AFK36185.1| unknown [Lotus japonicus]
          Length = 317

 Score =  581 bits (1498), Expect = e-163
 Identities = 290/317 (91%), Positives = 296/317 (93%)
 Frame = -1

Query: 1378 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNNTAPNGGDGVVSPLPPRVYG 1199
            MAS SSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHN+   NG DGVVS +PPRVYG
Sbjct: 1    MASPSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNSVPSNGADGVVSSVPPRVYG 60

Query: 1198 CVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAQ 1019
            CVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDA+
Sbjct: 61   CVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAE 120

Query: 1018 ESDMHIHRALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVHSSYTI 839
            ESDM+IHRALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFV SSYTI
Sbjct: 121  ESDMNIHRALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTI 180

Query: 838  ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGD 659
            ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGD
Sbjct: 181  ETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGD 240

Query: 658  VPCENXXXXXXXXXXXXLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNDLVDKF 479
            VPCEN            LPAIESGKFQDDFLM YNDTLLISYL MLTNCSSAMN+LVDKF
Sbjct: 241  VPCENSLLRQVSSLLRRLPAIESGKFQDDFLMGYNDTLLISYLTMLTNCSSAMNELVDKF 300

Query: 478  NTAYDRHSRRGGRTAFL 428
            NTAYDRHSRRGGRTAF+
Sbjct: 301  NTAYDRHSRRGGRTAFM 317


>ref|XP_003522838.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Glycine max]
          Length = 318

 Score =  580 bits (1494), Expect = e-163
 Identities = 292/318 (91%), Positives = 297/318 (93%), Gaps = 1/318 (0%)
 Frame = -1

Query: 1378 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAP-HNNTAPNGGDGVVSPLPPRVY 1202
            MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPT AP HNN   NGGDGVVSPL PRVY
Sbjct: 1    MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTHAPPHNNNNANGGDGVVSPLSPRVY 60

Query: 1201 GCVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDA 1022
            GCVIGVQKGRTVEIFNSFELLYDPS+HSLDR FLEKKQELYKKVFPHFYILGWYSTGSDA
Sbjct: 61   GCVIGVQKGRTVEIFNSFELLYDPSSHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSDA 120

Query: 1021 QESDMHIHRALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVHSSYT 842
            +ESDMHIH+ALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFV SSYT
Sbjct: 121  EESDMHIHKALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYT 180

Query: 841  IETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKG 662
            IETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKG
Sbjct: 181  IETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKG 240

Query: 661  DVPCENXXXXXXXXXXXXLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNDLVDK 482
            DVPCEN            LPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMN+LVDK
Sbjct: 241  DVPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNELVDK 300

Query: 481  FNTAYDRHSRRGGRTAFL 428
            FN AYDRHSRRGGRTAF+
Sbjct: 301  FNIAYDRHSRRGGRTAFM 318


>ref|XP_003527566.1| PREDICTED: COP9 signalosome complex subunit 6a-like [Glycine max]
          Length = 322

 Score =  567 bits (1461), Expect = e-159
 Identities = 289/322 (89%), Positives = 295/322 (91%), Gaps = 5/322 (1%)
 Frame = -1

Query: 1378 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPH----NNTAPNGGDGVVSP-LP 1214
            MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPT AP     NN   NGGDGVVSP L 
Sbjct: 1    MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTHAPPHTTTNNNNANGGDGVVSPPLH 60

Query: 1213 PRVYGCVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYST 1034
            PRVYGCVIGVQKGRTVEIFNSFELLYDPSTHSLDR FLEKKQELYKKVFPHFYILGWYST
Sbjct: 61   PRVYGCVIGVQKGRTVEIFNSFELLYDPSTHSLDRTFLEKKQELYKKVFPHFYILGWYST 120

Query: 1033 GSDAQESDMHIHRALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVH 854
            GSDA+ESDMHIH+ALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFV 
Sbjct: 121  GSDAEESDMHIHKALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVR 180

Query: 853  SSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLA 674
            SSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTG HSAIKMLHSRIKVLHHYLLA
Sbjct: 181  SSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGTHSAIKMLHSRIKVLHHYLLA 240

Query: 673  MQKGDVPCENXXXXXXXXXXXXLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMND 494
            MQKGDVPCEN            LPAIESGKFQDDFLMEYNDT+LISYLAMLTNCSS+MN+
Sbjct: 241  MQKGDVPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTVLISYLAMLTNCSSSMNE 300

Query: 493  LVDKFNTAYDRHSRRGGRTAFL 428
            LVDKFN AYDRHSRRGGRTAF+
Sbjct: 301  LVDKFNIAYDRHSRRGGRTAFM 322


>ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit 6a [Vitis vinifera]
            gi|296090054|emb|CBI39873.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  538 bits (1386), Expect = e-150
 Identities = 272/322 (84%), Positives = 290/322 (90%), Gaps = 5/322 (1%)
 Frame = -1

Query: 1378 MASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNNTAPNGGDGVVS-----PLP 1214
            MASSSSSGLTFKLHPLVIVNISDHYTRVKSQ  P   PH ++  NGG+G  +     P P
Sbjct: 1    MASSSSSGLTFKLHPLVIVNISDHYTRVKSQTQP---PHLSS--NGGEGAAAAASPPPPP 55

Query: 1213 PRVYGCVIGVQKGRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYST 1034
            PRV+GCVIGVQ+GRTVEIFNSFELLYDPSTHSLDR FLEKKQELYKKVFP+FYILGWYST
Sbjct: 56   PRVFGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPNFYILGWYST 115

Query: 1033 GSDAQESDMHIHRALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVH 854
            GSDAQESDMHIH+ALMDINESPVYVLLNPSINH+QKDLPV+I+ESELHVIDGIPQLIFV 
Sbjct: 116  GSDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIDGIPQLIFVR 175

Query: 853  SSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLA 674
            ++YTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKML+SRI+VLHHYLLA
Sbjct: 176  ANYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLA 235

Query: 673  MQKGDVPCENXXXXXXXXXXXXLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMND 494
            MQKGD+PCEN            LPAIESGKFQDDFLMEYNDTLLISYLAM TNCSS MN+
Sbjct: 236  MQKGDIPCENSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMFTNCSSTMNE 295

Query: 493  LVDKFNTAYDRHSRRGGRTAFL 428
            LVDKFNTAYDRHSRRGGRTAF+
Sbjct: 296  LVDKFNTAYDRHSRRGGRTAFI 317


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