BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012289
         (517 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45778.1| unknown [Medicago truncatula]                          157   6e-37
ref|XP_003594343.1| DNA-directed RNA polymerase II subunit rpb4 ...   157   6e-37
ref|XP_003534990.1| PREDICTED: DNA-directed RNA polymerase II su...   147   9e-34
ref|XP_002525033.1| conserved hypothetical protein [Ricinus comm...   137   7e-31
ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II su...   137   1e-30

>gb|AFK45778.1| unknown [Medicago truncatula]
          Length = 201

 Score =  157 bits (398), Expect = 6e-37
 Identities = 80/116 (68%), Positives = 89/116 (76%)
 Frame = -2

Query: 513 KCLMDCEAADILQGIHEQMVMLSRDPAIKMPVSFDKGLQYAKSSRKYSNTNPESIRRILE 334
           KCLMDCEAA +LQGI +QMV LSRDP+IKMP SFDKGL YAKSS     +NPES+R  LE
Sbjct: 84  KCLMDCEAAVMLQGIQDQMVALSRDPSIKMPASFDKGLYYAKSSSSSKYSNPESVRHTLE 143

Query: 333 PLLDHGLTDSEICVIANVCPETADEVFALLPSLKGRRSINXXXXXXXXXXLVKHKQ 166
           PL++H LT+SEICVIANVCPETADEVFALLPSLK +R IN          L K KQ
Sbjct: 144 PLMNHDLTESEICVIANVCPETADEVFALLPSLKSKRGINSQPVEEALSELAKFKQ 199


>ref|XP_003594343.1| DNA-directed RNA polymerase II subunit rpb4 [Medicago truncatula]
           gi|124360902|gb|ABN08874.1| RNA polymerase Rpb4
           [Medicago truncatula] gi|355483391|gb|AES64594.1|
           DNA-directed RNA polymerase II subunit rpb4 [Medicago
           truncatula]
          Length = 223

 Score =  157 bits (398), Expect = 6e-37
 Identities = 80/116 (68%), Positives = 89/116 (76%)
 Frame = -2

Query: 513 KCLMDCEAADILQGIHEQMVMLSRDPAIKMPVSFDKGLQYAKSSRKYSNTNPESIRRILE 334
           KCLMDCEAA +LQGI +QMV LSRDP+IKMP SFDKGL YAKSS     +NPES+R  LE
Sbjct: 106 KCLMDCEAAVMLQGIQDQMVALSRDPSIKMPASFDKGLYYAKSSSSSKYSNPESVRHTLE 165

Query: 333 PLLDHGLTDSEICVIANVCPETADEVFALLPSLKGRRSINXXXXXXXXXXLVKHKQ 166
           PL++H LT+SEICVIANVCPETADEVFALLPSLK +R IN          L K KQ
Sbjct: 166 PLMNHDLTESEICVIANVCPETADEVFALLPSLKSKRGINSQPVEEALSELAKFKQ 221


>ref|XP_003534990.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb4-like
           [Glycine max]
          Length = 211

 Score =  147 bits (371), Expect = 9e-34
 Identities = 78/119 (65%), Positives = 89/119 (74%)
 Frame = -2

Query: 516 IKCLMDCEAADILQGIHEQMVMLSRDPAIKMPVSFDKGLQYAKSSRKYSNTNPESIRRIL 337
           IKCLMDCEA DILQGI E+MVMLSRD  +KMP+SFDKGLQYAKS+ KY +   +SIR IL
Sbjct: 95  IKCLMDCEAVDILQGIQERMVMLSRDSTVKMPISFDKGLQYAKSNSKYLDL--QSIRHIL 152

Query: 336 EPLLDHGLTDSEICVIANVCPETADEVFALLPSLKGRRSINXXXXXXXXXXLVKHKQPM 160
           + L   G+TDSEICVI NVCPET DEVFALLPSLK RR+I+          L K +Q M
Sbjct: 153 DRLAKCGVTDSEICVIGNVCPETIDEVFALLPSLKDRRNIDSQVLKDSLSELAKFRQTM 211


>ref|XP_002525033.1| conserved hypothetical protein [Ricinus communis]
           gi|223535695|gb|EEF37360.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 203

 Score =  137 bits (346), Expect = 7e-31
 Identities = 63/99 (63%), Positives = 83/99 (83%)
 Frame = -2

Query: 513 KCLMDCEAADILQGIHEQMVMLSRDPAIKMPVSFDKGLQYAKSSRKYSNTNPESIRRILE 334
           KCLMDCEAA +LQGI EQMV+LSRDP IK+PVSFD+ LQ+A++  ++  TNP+S+RRILE
Sbjct: 88  KCLMDCEAAQVLQGIQEQMVLLSRDPTIKLPVSFDRALQHARTGARF--TNPQSVRRILE 145

Query: 333 PLLDHGLTDSEICVIANVCPETADEVFALLPSLKGRRSI 217
            L  HG+++ EIC IANVCP+  DEVFAL+PSLK ++++
Sbjct: 146 GLKKHGVSEGEICTIANVCPDGVDEVFALVPSLKSKKNV 184


>ref|XP_004158834.1| PREDICTED: DNA-directed RNA polymerase II subunit rpb4-like
           [Cucumis sativus]
          Length = 220

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/98 (68%), Positives = 79/98 (80%)
 Frame = -2

Query: 513 KCLMDCEAADILQGIHEQMVMLSRDPAIKMPVSFDKGLQYAKSSRKYSNTNPESIRRILE 334
           +CLMDCEAA +LQGI +QMV LS DP IK+P SFD+GLQYAK +  Y   N ES+R +LE
Sbjct: 106 QCLMDCEAAQLLQGIQDQMVFLSADPTIKIPTSFDRGLQYAKRANHY--VNAESVRPVLE 163

Query: 333 PLLDHGLTDSEICVIANVCPETADEVFALLPSLKGRRS 220
            L  +G+TDSEICVIANVCP+T DEVFALLPSLK +RS
Sbjct: 164 TLKKYGVTDSEICVIANVCPDTTDEVFALLPSLKRKRS 201