BLASTX nr result

ID: Glycyrrhiza24_contig00012269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012269
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002535451.1| conserved hypothetical protein [Ricinus comm...   111   2e-25
ref|XP_002523280.1| conserved hypothetical protein [Ricinus comm...    76   1e-11
ref|XP_003588347.1| NADH-ubiquinone oxidoreductase chain [Medica...    75   3e-11

>ref|XP_002535451.1| conserved hypothetical protein [Ricinus communis]
           gi|223523062|gb|EEF26930.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 115

 Score =  111 bits (277), Expect(2) = 2e-25
 Identities = 54/59 (91%), Positives = 54/59 (91%)
 Frame = +2

Query: 734 RGVITSLARGWDSFTCIPASTTKSSGLNAPTTAVQPFLGFVESGFPFTHNGGPHQTRQA 910
           RGV TSLARGWDSFTCIPASTTKSSGLNA TTAVQPFLGFVESGFPFTHNGG   TRQA
Sbjct: 20  RGVSTSLARGWDSFTCIPASTTKSSGLNALTTAVQPFLGFVESGFPFTHNGGAAPTRQA 78



 Score = 31.6 bits (70), Expect(2) = 2e-25
 Identities = 15/21 (71%), Positives = 16/21 (76%)
 Frame = +1

Query: 598 ASWTD*RREVTERGSEGSRSR 660
           ASWTD RREVTERG   S +R
Sbjct: 8   ASWTDERREVTERGVSTSLAR 28


>ref|XP_002523280.1| conserved hypothetical protein [Ricinus communis]
           gi|223537493|gb|EEF39119.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 77

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 37/45 (82%), Positives = 38/45 (84%)
 Frame = +2

Query: 737 GVITSLARGWDSFTCIPASTTKSSGLNAPTTAVQPFLGFVESGFP 871
           G  TSLARGWDSFTCI ASTTKSS LNA TT VQPFL F+ESGFP
Sbjct: 24  GRSTSLARGWDSFTCISASTTKSSSLNALTTLVQPFLEFIESGFP 68


>ref|XP_003588347.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477395|gb|AES58598.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 339

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 37/52 (71%), Positives = 38/52 (73%)
 Frame = -3

Query: 585 DRGGYIAGVVSVVCHEVPMDKGTSEXXXXXXXXXXXXXXLHSIVSYCTVPYQ 430
           +RGGYIAGVVSVVCHEVPMDKGTSE              LHSIVSYCTVPYQ
Sbjct: 199 ERGGYIAGVVSVVCHEVPMDKGTSESSLLGAGSPLPSIPLHSIVSYCTVPYQ 250



 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 33/35 (94%), Positives = 34/35 (97%), Gaps = 1/35 (2%)
 Frame = -1

Query: 113 REDIRGSSEWRFPCREPDEGRPSRPVRRAGIS-PY 12
           R+DIRGSSEWRFPCREPDEGRPSRPVRRAGIS PY
Sbjct: 257 RKDIRGSSEWRFPCREPDEGRPSRPVRRAGISRPY 291


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