BLASTX nr result

ID: Glycyrrhiza24_contig00012258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012258
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536253.1| PREDICTED: uncharacterized protein At4g14450...    83   2e-14
emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera]    80   1e-13
ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450...    80   2e-13
emb|CBI23583.3| unnamed protein product [Vitis vinifera]               78   6e-13
ref|XP_002314639.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_003536253.1| PREDICTED: uncharacterized protein At4g14450, chloroplastic-like
           [Glycine max]
          Length = 95

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 47/97 (48%), Positives = 54/97 (55%)
 Frame = -2

Query: 409 EANRNRHGVVGRRQQSRLQSRAPSSLQINRAVDWNVAIXXXXXXXXXXXXXXXXXXXXXX 230
           + N NRH      Q SRLQ RAPSSLQINRAV+WNVAI                      
Sbjct: 5   QTNNNRH------QPSRLQRRAPSSLQINRAVEWNVAIPLLSPLASSPPPMELKPPQ--- 55

Query: 229 PAQQRRQSSEPEKVVFKKWQHPAAPFCYEQASVVPPF 119
             +  ++ +E   V FKKWQHPAAPFCYE A +VPPF
Sbjct: 56  --EPPQREAEKVTVSFKKWQHPAAPFCYEPAPMVPPF 90


>emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera]
          Length = 104

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 48/101 (47%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = -2

Query: 415 MAEANRNRHGV-VGRRQQSRLQSRAPSSLQINRAVDWNVAIXXXXXXXXXXXXXXXXXXX 239
           MA+ ++ R    V RR  SRLQ RAPSSLQI+ A DW VAI                   
Sbjct: 1   MADTSQTRPSAGVNRRPPSRLQRRAPSSLQISPAADWKVAIPLLSPLATSPSSPKLIDRT 60

Query: 238 XXXPAQQR-RQSSEPEKVVFKKWQHPAAPFCYEQASVVPPF 119
                ++  RQ+ E EK VFKKWQHPAAPFCYE AS V  F
Sbjct: 61  AEVKPKEEPRQTKEGEKPVFKKWQHPAAPFCYEPASFVRSF 101


>ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450, chloroplastic-like
           [Vitis vinifera]
          Length = 104

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 48/101 (47%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
 Frame = -2

Query: 415 MAEANRNRHGV-VGRRQQSRLQSRAPSSLQINRAVDWNVAIXXXXXXXXXXXXXXXXXXX 239
           MA+ ++ R    V RR  SRLQ RAPSSLQI+ A DW VAI                   
Sbjct: 1   MADTSQTRPSAGVNRRPPSRLQRRAPSSLQISPAADWKVAIPLLSPLATSPSSPKLIDRT 60

Query: 238 XXXPAQQR-RQSSEPEKVVFKKWQHPAAPFCYEQASVVPPF 119
                ++  RQ  E EK VFKKWQHPAAPFCYE AS V  F
Sbjct: 61  AEVKPKEEPRQMKEGEKPVFKKWQHPAAPFCYEPASFVRSF 101


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 45/89 (50%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = -2

Query: 382  VGRRQQSRLQSRAPSSLQINRAVDWNVAIXXXXXXXXXXXXXXXXXXXXXXPAQQR-RQS 206
            V RR  SRLQ RAPSSLQI+ A DW VAI                        ++  RQ 
Sbjct: 1196 VNRRPPSRLQRRAPSSLQISPAADWKVAIPLLSPLATSPSSPKLIDRTAEVKPKEEPRQM 1255

Query: 205  SEPEKVVFKKWQHPAAPFCYEQASVVPPF 119
             E EK VFKKWQHPAAPFCYE AS V  F
Sbjct: 1256 KEGEKPVFKKWQHPAAPFCYEPASFVRSF 1284


>ref|XP_002314639.1| predicted protein [Populus trichocarpa] gi|222863679|gb|EEF00810.1|
           predicted protein [Populus trichocarpa]
          Length = 107

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 44/104 (42%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
 Frame = -2

Query: 415 MAEANRNRHGVVGRRQQSRLQSRAPSSLQINRAVD----WNVAIXXXXXXXXXXXXXXXX 248
           MA   RN +    R Q SRLQ R P+SLQI+ A      W VAI                
Sbjct: 1   MANTLRNSNSAAARSQPSRLQRRRPASLQISPASSSSSCWKVAIPLLSPLITSPTAMDMK 60

Query: 247 XXXXXXPAQQRRQSSEPEK-VVFKKWQHPAAPFCYEQASVVPPF 119
                 P   R Q +E EK VVF KWQHPAAP CYE A   P F
Sbjct: 61  SREDPQPPP-RSQGTEGEKPVVFTKWQHPAAPLCYEPAKFKPSF 103


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