BLASTX nr result

ID: Glycyrrhiza24_contig00012244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012244
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592963.1| TCP family transcription factor-like protein...    91   8e-17
ref|XP_002328698.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycoper...    73   2e-11
ref|XP_002529010.1| transcription factor, putative [Ricinus comm...    73   3e-11
emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]    71   8e-11

>ref|XP_003592963.1| TCP family transcription factor-like protein [Medicago truncatula]
           gi|357445449|ref|XP_003593002.1| TCP family
           transcription factor-like protein [Medicago truncatula]
           gi|355482011|gb|AES63214.1| TCP family transcription
           factor-like protein [Medicago truncatula]
           gi|355482050|gb|AES63253.1| TCP family transcription
           factor-like protein [Medicago truncatula]
          Length = 487

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 50/66 (75%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
 Frame = -1

Query: 192 HLIDASLAIATRSDPPILDSAKKSSNQIQ--QQLLTTSAAVANPPKRSTKDRHTKVDGRG 19
           HLIDASLAIATRS+PP+ D    S+NQIQ      TT  AVANPPKRSTKDRHTKVDGRG
Sbjct: 85  HLIDASLAIATRSEPPLPDV---SNNQIQPFSSTSTTVTAVANPPKRSTKDRHTKVDGRG 141

Query: 18  RRIRMP 1
           RRIRMP
Sbjct: 142 RRIRMP 147


>ref|XP_002328698.1| predicted protein [Populus trichocarpa] gi|222838996|gb|EEE77347.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 39/69 (56%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
 Frame = -1

Query: 189 LIDASLAIATRSDPPILDSAKKSSNQIQQQLLTTSA------AVANPPKRSTKDRHTKVD 28
           L+DASLAIAT  DP ++DS KK    +      T++      A   P KRSTKDRHTKVD
Sbjct: 116 LVDASLAIATSYDPSLVDSTKKKQQNLSIAPAATNSTSAATTAAVTPAKRSTKDRHTKVD 175

Query: 27  GRGRRIRMP 1
           GRGRRIRMP
Sbjct: 176 GRGRRIRMP 184


>ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycopersicum]
           gi|306416833|gb|ADM87260.1| TCP transcription factor 11
           [Solanum lycopersicum]
          Length = 523

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 42/64 (65%), Positives = 45/64 (70%)
 Frame = -1

Query: 192 HLIDASLAIATRSDPPILDSAKKSSNQIQQQLLTTSAAVANPPKRSTKDRHTKVDGRGRR 13
           HL+DASLAIATRSD  ++D  KKS   IQQ           PPKR TKDRHTKVDGRGRR
Sbjct: 99  HLVDASLAIATRSDT-LVDPNKKSQLAIQQTQPVQPQQP--PPKRQTKDRHTKVDGRGRR 155

Query: 12  IRMP 1
           IRMP
Sbjct: 156 IRMP 159


>ref|XP_002529010.1| transcription factor, putative [Ricinus communis]
           gi|223531550|gb|EEF33380.1| transcription factor,
           putative [Ricinus communis]
          Length = 546

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/64 (60%), Positives = 44/64 (68%)
 Frame = -1

Query: 192 HLIDASLAIATRSDPPILDSAKKSSNQIQQQLLTTSAAVANPPKRSTKDRHTKVDGRGRR 13
           HL+DASLAIATRS P +      ++        T +AA A P KRSTKDRHTKVDGRGRR
Sbjct: 120 HLVDASLAIATRSGPSLSIVTSTATTT------TATAAAATPAKRSTKDRHTKVDGRGRR 173

Query: 12  IRMP 1
           IRMP
Sbjct: 174 IRMP 177


>emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]
          Length = 550

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/74 (58%), Positives = 49/74 (66%), Gaps = 11/74 (14%)
 Frame = -1

Query: 189 LIDASLAIATRSDPP-------ILDSAKKSSNQIQQQLLTTSAAVA---NPP-KRSTKDR 43
           L+DASLAIATRS+         ++DS KK+  Q QQQ       +    NPP KRSTKDR
Sbjct: 123 LVDASLAIATRSEADRSRSGGGVVDSTKKNQQQQQQQQQQQQQQLTIGTNPPAKRSTKDR 182

Query: 42  HTKVDGRGRRIRMP 1
           HTKVDGRGRRIRMP
Sbjct: 183 HTKVDGRGRRIRMP 196


Top