BLASTX nr result

ID: Glycyrrhiza24_contig00012243 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012243
         (225 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003592963.1| TCP family transcription factor-like protein...    89   5e-16
ref|XP_002328698.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycoper...    75   7e-12
ref|XP_002529010.1| transcription factor, putative [Ricinus comm...    73   3e-11
emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]    71   8e-11

>ref|XP_003592963.1| TCP family transcription factor-like protein [Medicago truncatula]
           gi|357445449|ref|XP_003593002.1| TCP family
           transcription factor-like protein [Medicago truncatula]
           gi|355482011|gb|AES63214.1| TCP family transcription
           factor-like protein [Medicago truncatula]
           gi|355482050|gb|AES63253.1| TCP family transcription
           factor-like protein [Medicago truncatula]
          Length = 487

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/63 (68%), Positives = 47/63 (74%)
 Frame = -1

Query: 189 HLIDASLAIATRSDPPILDSAKKSSNQIQQQLLTTSAAANPPKRSTKDRHTKVDGRGRRI 10
           HLIDASLAIATRS+PP+ D +            T +A ANPPKRSTKDRHTKVDGRGRRI
Sbjct: 85  HLIDASLAIATRSEPPLPDVSNNQIQPFSSTSTTVTAVANPPKRSTKDRHTKVDGRGRRI 144

Query: 9   RMP 1
           RMP
Sbjct: 145 RMP 147


>ref|XP_002328698.1| predicted protein [Populus trichocarpa] gi|222838996|gb|EEE77347.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/69 (57%), Positives = 45/69 (65%), Gaps = 7/69 (10%)
 Frame = -1

Query: 186 LIDASLAIATRSDPPILDSAKKSSNQIQ-------QQLLTTSAAANPPKRSTKDRHTKVD 28
           L+DASLAIAT  DP ++DS KK    +             T+AA  P KRSTKDRHTKVD
Sbjct: 116 LVDASLAIATSYDPSLVDSTKKKQQNLSIAPAATNSTSAATTAAVTPAKRSTKDRHTKVD 175

Query: 27  GRGRRIRMP 1
           GRGRRIRMP
Sbjct: 176 GRGRRIRMP 184


>ref|NP_001234831.1| TCP transcription factor 11 [Solanum lycopersicum]
           gi|306416833|gb|ADM87260.1| TCP transcription factor 11
           [Solanum lycopersicum]
          Length = 523

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 42/63 (66%), Positives = 45/63 (71%)
 Frame = -1

Query: 189 HLIDASLAIATRSDPPILDSAKKSSNQIQQQLLTTSAAANPPKRSTKDRHTKVDGRGRRI 10
           HL+DASLAIATRSD  ++D  KKS   IQQ          PPKR TKDRHTKVDGRGRRI
Sbjct: 99  HLVDASLAIATRSDT-LVDPNKKSQLAIQQTQ-PVQPQQPPPKRQTKDRHTKVDGRGRRI 156

Query: 9   RMP 1
           RMP
Sbjct: 157 RMP 159


>ref|XP_002529010.1| transcription factor, putative [Ricinus communis]
           gi|223531550|gb|EEF33380.1| transcription factor,
           putative [Ricinus communis]
          Length = 546

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/63 (61%), Positives = 44/63 (69%)
 Frame = -1

Query: 189 HLIDASLAIATRSDPPILDSAKKSSNQIQQQLLTTSAAANPPKRSTKDRHTKVDGRGRRI 10
           HL+DASLAIATRS P +      ++         T+AAA P KRSTKDRHTKVDGRGRRI
Sbjct: 120 HLVDASLAIATRSGPSLSIVTSTATTTT-----ATAAAATPAKRSTKDRHTKVDGRGRRI 174

Query: 9   RMP 1
           RMP
Sbjct: 175 RMP 177


>emb|CAN64544.1| hypothetical protein VITISV_033383 [Vitis vinifera]
          Length = 550

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/74 (58%), Positives = 49/74 (66%), Gaps = 12/74 (16%)
 Frame = -1

Query: 186 LIDASLAIATRSDPP-------ILDSAKKSSNQIQQQLLTT----SAAANPP-KRSTKDR 43
           L+DASLAIATRS+         ++DS KK+  Q QQQ        +   NPP KRSTKDR
Sbjct: 123 LVDASLAIATRSEADRSRSGGGVVDSTKKNQQQQQQQQQQQQQQLTIGTNPPAKRSTKDR 182

Query: 42  HTKVDGRGRRIRMP 1
           HTKVDGRGRRIRMP
Sbjct: 183 HTKVDGRGRRIRMP 196


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