BLASTX nr result
ID: Glycyrrhiza24_contig00012229
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00012229 (421 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003544458.1| PREDICTED: uncharacterized protein LOC100780... 208 3e-52 ref|XP_003519660.1| PREDICTED: uncharacterized protein LOC100793... 207 9e-52 emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CA... 187 8e-46 ref|XP_003617946.1| Nucleoporin [Medicago truncatula] gi|3555192... 164 7e-39 ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249... 115 3e-24 >ref|XP_003544458.1| PREDICTED: uncharacterized protein LOC100780148 [Glycine max] Length = 1315 Score = 208 bits (530), Expect = 3e-52 Identities = 102/140 (72%), Positives = 113/140 (80%) Frame = +1 Query: 1 IPLNDGDVARDADASWLLCVVNCDNTSLGTNRVAKHCNSAAVVLCNRKTRAVIYWPDIYS 180 IPLND DV R+ SWLL VVNCD TS+GTN++AK CNSAAVVLCN +TRAVIYWPDIYS Sbjct: 145 IPLNDADVGRNDAGSWLLRVVNCDATSVGTNKIAKQCNSAAVVLCNCRTRAVIYWPDIYS 204 Query: 181 RSYNAAPVTSLASSDELEVMLTPDGKTSLRRQLRQSKPGGGLNGLHVFNSMIASVVPGCN 360 +S+ APVTSL SSDELE ++ PDGK S RQ RQSK G L+GLH FNSMIAS P C Sbjct: 205 QSH--APVTSLVSSDELEAVMIPDGKASFHRQRRQSKLGSSLSGLHTFNSMIASADPSCK 262 Query: 361 FVCVALACSPSGELWQFQCS 420 FVCVALACS SGELWQFQC+ Sbjct: 263 FVCVALACSSSGELWQFQCT 282 >ref|XP_003519660.1| PREDICTED: uncharacterized protein LOC100793167 [Glycine max] Length = 1312 Score = 207 bits (526), Expect = 9e-52 Identities = 102/140 (72%), Positives = 112/140 (80%) Frame = +1 Query: 1 IPLNDGDVARDADASWLLCVVNCDNTSLGTNRVAKHCNSAAVVLCNRKTRAVIYWPDIYS 180 IPLND DV R+ SWLLCVVNCD TS+GTN+VAK CNSAAVVLCN +TRAVIYWPDIYS Sbjct: 145 IPLNDADVGRNHAGSWLLCVVNCDATSVGTNKVAKQCNSAAVVLCNCRTRAVIYWPDIYS 204 Query: 181 RSYNAAPVTSLASSDELEVMLTPDGKTSLRRQLRQSKPGGGLNGLHVFNSMIASVVPGCN 360 + + APVTSL SSDELE +LTPD K S RQ RQSK G L+GLH FNSMIAS P C Sbjct: 205 QLH--APVTSLVSSDELEAVLTPDRKASFNRQRRQSKLGSSLSGLHTFNSMIASADPSCK 262 Query: 361 FVCVALACSPSGELWQFQCS 420 FVCVALACS S ELWQF+C+ Sbjct: 263 FVCVALACSSSDELWQFKCT 282 >emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CAI64811.1| nucleoporin [Lotus japonicus] Length = 1309 Score = 187 bits (475), Expect = 8e-46 Identities = 95/140 (67%), Positives = 104/140 (74%) Frame = +1 Query: 1 IPLNDGDVARDADASWLLCVVNCDNTSLGTNRVAKHCNSAAVVLCNRKTRAVIYWPDIYS 180 IP NDGDV + SWLLCVVN D S G N+VAKHCNSAAVVLCNRKTRAV+YWPDIYS Sbjct: 141 IPFNDGDVGKHEAGSWLLCVVNYDGASSGANKVAKHCNSAAVVLCNRKTRAVVYWPDIYS 200 Query: 181 RSYNAAPVTSLASSDELEVMLTPDGKTSLRRQLRQSKPGGGLNGLHVFNSMIASVVPGCN 360 +S N APVT+L SSDE L DGKT R S LN LH+FNSMIAS VPGC+ Sbjct: 201 QSRN-APVTNLVSSDEFVTSLVSDGKTFSNWLRRPS----SLNELHMFNSMIASAVPGCD 255 Query: 361 FVCVALACSPSGELWQFQCS 420 FVCVA ACS SG+LWQF+CS Sbjct: 256 FVCVAFACSSSGKLWQFKCS 275 >ref|XP_003617946.1| Nucleoporin [Medicago truncatula] gi|355519281|gb|AET00905.1| Nucleoporin [Medicago truncatula] Length = 1308 Score = 164 bits (415), Expect = 7e-39 Identities = 90/140 (64%), Positives = 103/140 (73%) Frame = +1 Query: 1 IPLNDGDVARDADASWLLCVVNCDNTSLGTNRVAKHCNSAAVVLCNRKTRAVIYWPDIYS 180 IP ND VA SWL+ VVNCD++S G+N+ AKH AVVLCNRKTRAVIYWPDIYS Sbjct: 145 IPFND--VANYDTGSWLVSVVNCDSSSFGSNKAAKH---VAVVLCNRKTRAVIYWPDIYS 199 Query: 181 RSYNAAPVTSLASSDELEVMLTPDGKTSLRRQLRQSKPGGGLNGLHVFNSMIASVVPGCN 360 +S NA PVTSLASSDELE + KT +RQ RQSK L L+ FNS+IASVVPG + Sbjct: 200 QSSNA-PVTSLASSDELEAV---GEKTPFKRQTRQSKQETDLTELNAFNSVIASVVPGYS 255 Query: 361 FVCVALACSPSGELWQFQCS 420 C+ALACS SGELWQF+CS Sbjct: 256 LACIALACSSSGELWQFECS 275 >ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249432 isoform 1 [Vitis vinifera] Length = 1330 Score = 115 bits (289), Expect = 3e-24 Identities = 67/139 (48%), Positives = 87/139 (62%), Gaps = 3/139 (2%) Frame = +1 Query: 13 DGDVARDA--DASWLLCVVNCDNTSLGTNRVAKHCNSAAVVLCNRKTRAVIYWPDIYSRS 186 +GDV R+ SWLLCVV+ T + + NSA VVLCN+KTR V+YWPDIY++ Sbjct: 153 NGDVNRNNYHANSWLLCVVDWHGTFRSVGK--QQGNSAGVVLCNQKTRTVVYWPDIYAQG 210 Query: 187 YNAAPVTSLASSDELEVMLTP-DGKTSLRRQLRQSKPGGGLNGLHVFNSMIASVVPGCNF 363 + APV S ASSD E+ +P +GK + + + S+ G G FNS+IAS VP Sbjct: 211 -DVAPVVSFASSDGSELNFSPGNGKITPNKLWQHSRLGSNSVGSSSFNSLIASAVPDTQH 269 Query: 364 VCVALACSPSGELWQFQCS 420 C+ALA S +GELWQFQCS Sbjct: 270 KCIALASSSNGELWQFQCS 288