BLASTX nr result

ID: Glycyrrhiza24_contig00012229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012229
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544458.1| PREDICTED: uncharacterized protein LOC100780...   208   3e-52
ref|XP_003519660.1| PREDICTED: uncharacterized protein LOC100793...   207   9e-52
emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CA...   187   8e-46
ref|XP_003617946.1| Nucleoporin [Medicago truncatula] gi|3555192...   164   7e-39
ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249...   115   3e-24

>ref|XP_003544458.1| PREDICTED: uncharacterized protein LOC100780148 [Glycine max]
          Length = 1315

 Score =  208 bits (530), Expect = 3e-52
 Identities = 102/140 (72%), Positives = 113/140 (80%)
 Frame = +1

Query: 1   IPLNDGDVARDADASWLLCVVNCDNTSLGTNRVAKHCNSAAVVLCNRKTRAVIYWPDIYS 180
           IPLND DV R+   SWLL VVNCD TS+GTN++AK CNSAAVVLCN +TRAVIYWPDIYS
Sbjct: 145 IPLNDADVGRNDAGSWLLRVVNCDATSVGTNKIAKQCNSAAVVLCNCRTRAVIYWPDIYS 204

Query: 181 RSYNAAPVTSLASSDELEVMLTPDGKTSLRRQLRQSKPGGGLNGLHVFNSMIASVVPGCN 360
           +S+  APVTSL SSDELE ++ PDGK S  RQ RQSK G  L+GLH FNSMIAS  P C 
Sbjct: 205 QSH--APVTSLVSSDELEAVMIPDGKASFHRQRRQSKLGSSLSGLHTFNSMIASADPSCK 262

Query: 361 FVCVALACSPSGELWQFQCS 420
           FVCVALACS SGELWQFQC+
Sbjct: 263 FVCVALACSSSGELWQFQCT 282


>ref|XP_003519660.1| PREDICTED: uncharacterized protein LOC100793167 [Glycine max]
          Length = 1312

 Score =  207 bits (526), Expect = 9e-52
 Identities = 102/140 (72%), Positives = 112/140 (80%)
 Frame = +1

Query: 1   IPLNDGDVARDADASWLLCVVNCDNTSLGTNRVAKHCNSAAVVLCNRKTRAVIYWPDIYS 180
           IPLND DV R+   SWLLCVVNCD TS+GTN+VAK CNSAAVVLCN +TRAVIYWPDIYS
Sbjct: 145 IPLNDADVGRNHAGSWLLCVVNCDATSVGTNKVAKQCNSAAVVLCNCRTRAVIYWPDIYS 204

Query: 181 RSYNAAPVTSLASSDELEVMLTPDGKTSLRRQLRQSKPGGGLNGLHVFNSMIASVVPGCN 360
           + +  APVTSL SSDELE +LTPD K S  RQ RQSK G  L+GLH FNSMIAS  P C 
Sbjct: 205 QLH--APVTSLVSSDELEAVLTPDRKASFNRQRRQSKLGSSLSGLHTFNSMIASADPSCK 262

Query: 361 FVCVALACSPSGELWQFQCS 420
           FVCVALACS S ELWQF+C+
Sbjct: 263 FVCVALACSSSDELWQFKCT 282


>emb|CAI64810.1| nucleoporin [Lotus japonicus] gi|83423284|emb|CAI64811.1|
           nucleoporin [Lotus japonicus]
          Length = 1309

 Score =  187 bits (475), Expect = 8e-46
 Identities = 95/140 (67%), Positives = 104/140 (74%)
 Frame = +1

Query: 1   IPLNDGDVARDADASWLLCVVNCDNTSLGTNRVAKHCNSAAVVLCNRKTRAVIYWPDIYS 180
           IP NDGDV +    SWLLCVVN D  S G N+VAKHCNSAAVVLCNRKTRAV+YWPDIYS
Sbjct: 141 IPFNDGDVGKHEAGSWLLCVVNYDGASSGANKVAKHCNSAAVVLCNRKTRAVVYWPDIYS 200

Query: 181 RSYNAAPVTSLASSDELEVMLTPDGKTSLRRQLRQSKPGGGLNGLHVFNSMIASVVPGCN 360
           +S N APVT+L SSDE    L  DGKT      R S     LN LH+FNSMIAS VPGC+
Sbjct: 201 QSRN-APVTNLVSSDEFVTSLVSDGKTFSNWLRRPS----SLNELHMFNSMIASAVPGCD 255

Query: 361 FVCVALACSPSGELWQFQCS 420
           FVCVA ACS SG+LWQF+CS
Sbjct: 256 FVCVAFACSSSGKLWQFKCS 275


>ref|XP_003617946.1| Nucleoporin [Medicago truncatula] gi|355519281|gb|AET00905.1|
           Nucleoporin [Medicago truncatula]
          Length = 1308

 Score =  164 bits (415), Expect = 7e-39
 Identities = 90/140 (64%), Positives = 103/140 (73%)
 Frame = +1

Query: 1   IPLNDGDVARDADASWLLCVVNCDNTSLGTNRVAKHCNSAAVVLCNRKTRAVIYWPDIYS 180
           IP ND  VA     SWL+ VVNCD++S G+N+ AKH    AVVLCNRKTRAVIYWPDIYS
Sbjct: 145 IPFND--VANYDTGSWLVSVVNCDSSSFGSNKAAKH---VAVVLCNRKTRAVIYWPDIYS 199

Query: 181 RSYNAAPVTSLASSDELEVMLTPDGKTSLRRQLRQSKPGGGLNGLHVFNSMIASVVPGCN 360
           +S NA PVTSLASSDELE +     KT  +RQ RQSK    L  L+ FNS+IASVVPG +
Sbjct: 200 QSSNA-PVTSLASSDELEAV---GEKTPFKRQTRQSKQETDLTELNAFNSVIASVVPGYS 255

Query: 361 FVCVALACSPSGELWQFQCS 420
             C+ALACS SGELWQF+CS
Sbjct: 256 LACIALACSSSGELWQFECS 275


>ref|XP_002272021.1| PREDICTED: uncharacterized protein LOC100249432 isoform 1 [Vitis
           vinifera]
          Length = 1330

 Score =  115 bits (289), Expect = 3e-24
 Identities = 67/139 (48%), Positives = 87/139 (62%), Gaps = 3/139 (2%)
 Frame = +1

Query: 13  DGDVARDA--DASWLLCVVNCDNTSLGTNRVAKHCNSAAVVLCNRKTRAVIYWPDIYSRS 186
           +GDV R+     SWLLCVV+   T     +  +  NSA VVLCN+KTR V+YWPDIY++ 
Sbjct: 153 NGDVNRNNYHANSWLLCVVDWHGTFRSVGK--QQGNSAGVVLCNQKTRTVVYWPDIYAQG 210

Query: 187 YNAAPVTSLASSDELEVMLTP-DGKTSLRRQLRQSKPGGGLNGLHVFNSMIASVVPGCNF 363
            + APV S ASSD  E+  +P +GK +  +  + S+ G    G   FNS+IAS VP    
Sbjct: 211 -DVAPVVSFASSDGSELNFSPGNGKITPNKLWQHSRLGSNSVGSSSFNSLIASAVPDTQH 269

Query: 364 VCVALACSPSGELWQFQCS 420
            C+ALA S +GELWQFQCS
Sbjct: 270 KCIALASSSNGELWQFQCS 288


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