BLASTX nr result

ID: Glycyrrhiza24_contig00012189 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012189
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-a...   169   2e-40
ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like ...   166   2e-39
ref|XP_004174075.1| PREDICTED: uncharacterized LOC101220708 [Cuc...    75   5e-12
ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent hel...    75   5e-12
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...    71   1e-10

>ref|XP_003535773.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Glycine max]
          Length = 975

 Score =  169 bits (429), Expect = 2e-40
 Identities = 92/142 (64%), Positives = 101/142 (71%), Gaps = 1/142 (0%)
 Frame = -2

Query: 425 GGWXXXXXXXXXXXXXXXXXXNIYNHSQVKPHNQPVPSKNTLNHRIAQGDETSFRPQNGH 246
           GGW                  N+YNHSQVKP   PV S NTLNHRIA+ DE S+  QNG+
Sbjct: 8   GGWSRRDSFSRGANSSNPSSSNVYNHSQVKPQTPPVSSTNTLNHRIARRDEPSYHAQNGN 67

Query: 245 TSQHQTVNSRISNTSVADYEKMSSQQAFKRTLPSSFQPPTTRALPSSSFAPNSRLSTLKD 66
           TSQHQTVNSRISN   ADYEKMSSQQAFKRTL SS QP  TRALP SSFAP+SRL  LKD
Sbjct: 68  TSQHQTVNSRISNNHGADYEKMSSQQAFKRTLQSSLQPSATRALP-SSFAPDSRLRNLKD 126

Query: 65  NISNSQL-DAYKNRHHGEGPST 3
           + ++SQL DAYKNR HG GP+T
Sbjct: 127 STNSSQLHDAYKNRPHGVGPNT 148


>ref|XP_003555190.1| PREDICTED: ATP-dependent helicase ULS1-like [Glycine max]
          Length = 1027

 Score =  166 bits (420), Expect = 2e-39
 Identities = 93/147 (63%), Positives = 102/147 (69%), Gaps = 1/147 (0%)
 Frame = -2

Query: 440 RNSDYGGWXXXXXXXXXXXXXXXXXXNIYNHSQVKPHNQPVPSKNTLNHRIAQGDETSFR 261
           ++S  GGW                  N+YNHSQVKP   PV S NTLNHRIA+ DE S+ 
Sbjct: 36  KSSYNGGWSRRDSSSRGANSSNPSSSNVYNHSQVKPQTLPVSSTNTLNHRIARRDEPSYH 95

Query: 260 PQNGHTSQHQTVNSRISNTSVADYEKMSSQQAFKRTLPSSFQPPTTRALPSSSFAPNSRL 81
             NG+TSQ QTV+SRISN   ADYEKMSSQQAFKRTLPSS QP  TRALP SSFA +SRL
Sbjct: 96  ALNGNTSQQQTVSSRISNIHGADYEKMSSQQAFKRTLPSSLQPSATRALP-SSFASDSRL 154

Query: 80  STLKDNISNSQL-DAYKNRHHGEGPST 3
             LKDN S+SQL DAYKNR HG GPST
Sbjct: 155 RNLKDNASSSQLHDAYKNRPHGVGPST 181


>ref|XP_004174075.1| PREDICTED: uncharacterized LOC101220708 [Cucumis sativus]
          Length = 225

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/84 (46%), Positives = 56/84 (66%)
 Frame = -2

Query: 299 NHRIAQGDETSFRPQNGHTSQHQTVNSRISNTSVADYEKMSSQQAFKRTLPSSFQPPTTR 120
           NH I   D+T++  +NG+T   +TVNSRI+ T+ ADYE++SSQQAFKRTLP +       
Sbjct: 72  NHHIVLTDDTNYLTENGNTGLPRTVNSRIATTAGADYERLSSQQAFKRTLPYT------- 124

Query: 119 ALPSSSFAPNSRLSTLKDNISNSQ 48
              S S+AP ++ + L DN+ +SQ
Sbjct: 125 ---SQSYAPLTKSNNLVDNVGSSQ 145


>ref|XP_004150194.1| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
           [Cucumis sativus]
          Length = 1015

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 39/84 (46%), Positives = 56/84 (66%)
 Frame = -2

Query: 299 NHRIAQGDETSFRPQNGHTSQHQTVNSRISNTSVADYEKMSSQQAFKRTLPSSFQPPTTR 120
           NH I   D+T++  +NG+T   +TVNSRI+ T+ ADYE++SSQQAFKRTLP +       
Sbjct: 72  NHHIVLTDDTNYLTENGNTGLPRTVNSRIATTAGADYERLSSQQAFKRTLPYT------- 124

Query: 119 ALPSSSFAPNSRLSTLKDNISNSQ 48
              S S+AP ++ + L DN+ +SQ
Sbjct: 125 ---SQSYAPLTKSNNLVDNVGSSQ 145


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853265|gb|EEE90812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 923

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 46/114 (40%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
 Frame = -2

Query: 341 VKPHNQPVPSKNTLNHR--IAQGDETSFRPQNGHTSQHQTVNSRISNTSVADYEKMSSQQ 168
           +K H QP    N  +     A+GD T      G+  Q + VNS+I+N S ADYEK+SSQQ
Sbjct: 1   MKIHGQPTNGANIRDTSWPSARGDGTRHFIGTGNVGQPRAVNSQIANVSGADYEKLSSQQ 60

Query: 167 AFKRTLPSSFQPPTTRALPSSSFAPNSRLSTLKDNISNSQLDAYKNRHHGEGPS 6
           A KRTLPSS  P         S   N   +T+++  S+   D Y N +H  GPS
Sbjct: 61  ALKRTLPSSLHP---------SEPSNKANNTVENASSSGSRDIYGNAYHLAGPS 105


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