BLASTX nr result

ID: Glycyrrhiza24_contig00012177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012177
         (731 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat...    82   7e-29
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ...    77   5e-17
gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis]         58   2e-06

>ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula]
           gi|355477374|gb|AES58577.1| ATP synthase subunit alpha
           [Medicago truncatula]
          Length = 1116

 Score = 81.6 bits (200), Expect(2) = 7e-29
 Identities = 39/44 (88%), Positives = 41/44 (93%)
 Frame = +1

Query: 1   AHPFSCSLAAIKKQRTLESASNSKGAGSLLTDSTATCWQLVALA 132
           AHPFSCSLAAIKKQRTLESASNSKGAGSLLTDSTATCW  ++ A
Sbjct: 759 AHPFSCSLAAIKKQRTLESASNSKGAGSLLTDSTATCWHSISSA 802



 Score = 72.0 bits (175), Expect(2) = 7e-29
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = +3

Query: 153 HFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT 251
           HFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT
Sbjct: 811 HFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT 843



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 31/46 (67%), Positives = 32/46 (69%)
 Frame = +1

Query: 592 PVNSFEFRSCDRTPQAECFTR*LGP*ST*TKGEHSSFTAWTTRVSN 729
           PVNSFEFRSCDRTP+              TKGEHSSFTAWTTRVSN
Sbjct: 874 PVNSFEFRSCDRTPE--------------TKGEHSSFTAWTTRVSN 905


>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
           gi|355477385|gb|AES58588.1| Ribosomal protein S10
           [Medicago truncatula]
          Length = 1152

 Score = 77.4 bits (189), Expect(2) = 5e-17
 Identities = 37/37 (100%), Positives = 37/37 (100%)
 Frame = -1

Query: 254 ARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 144
           ARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG
Sbjct: 323 ARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 359



 Score = 36.2 bits (82), Expect(2) = 5e-17
 Identities = 22/42 (52%), Positives = 22/42 (52%)
 Frame = -3

Query: 465 ACGLIRYNAQNLTSP*HMNNKTSP*RDGTDFHTGAAWLSSAR 340
           ACGLIRYNAQNLTS                    AAWLSSAR
Sbjct: 303 ACGLIRYNAQNLTS--------------------AAWLSSAR 324



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 32/47 (68%), Positives = 33/47 (70%)
 Frame = -1

Query: 731 GLDTLVVHAVNDECSPLVYVDQGPS*RVKHSAWGVRSQDRNSKELTG 591
           GLDTLVVHAVNDECSPLVYVDQGP              +RNSKELTG
Sbjct: 264 GLDTLVVHAVNDECSPLVYVDQGP--------------NRNSKELTG 296


>gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis]
          Length = 104

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 30/46 (65%), Positives = 32/46 (69%)
 Frame = +1

Query: 592 PVNSFEFRSCDRTPQAECFTR*LGP*ST*TKGEHSSFTAWTTRVSN 729
           PVNSFEF  C RTPQ E F+  LG     T+ E SSFTAWTTRVSN
Sbjct: 43  PVNSFEFHRCRRTPQVENFSVSLGLACQRTQAEFSSFTAWTTRVSN 88


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