BLASTX nr result
ID: Glycyrrhiza24_contig00012177
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00012177 (731 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncat... 82 7e-29 ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 77 5e-17 gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis] 58 2e-06 >ref|XP_003588326.1| ATP synthase subunit alpha [Medicago truncatula] gi|355477374|gb|AES58577.1| ATP synthase subunit alpha [Medicago truncatula] Length = 1116 Score = 81.6 bits (200), Expect(2) = 7e-29 Identities = 39/44 (88%), Positives = 41/44 (93%) Frame = +1 Query: 1 AHPFSCSLAAIKKQRTLESASNSKGAGSLLTDSTATCWQLVALA 132 AHPFSCSLAAIKKQRTLESASNSKGAGSLLTDSTATCW ++ A Sbjct: 759 AHPFSCSLAAIKKQRTLESASNSKGAGSLLTDSTATCWHSISSA 802 Score = 72.0 bits (175), Expect(2) = 7e-29 Identities = 33/33 (100%), Positives = 33/33 (100%) Frame = +3 Query: 153 HFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT 251 HFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT Sbjct: 811 HFGCKDFLLRRMSQQHKTRVSLVIGLDQTSHDT 843 Score = 61.6 bits (148), Expect = 2e-07 Identities = 31/46 (67%), Positives = 32/46 (69%) Frame = +1 Query: 592 PVNSFEFRSCDRTPQAECFTR*LGP*ST*TKGEHSSFTAWTTRVSN 729 PVNSFEFRSCDRTP+ TKGEHSSFTAWTTRVSN Sbjct: 874 PVNSFEFRSCDRTPE--------------TKGEHSSFTAWTTRVSN 905 >ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] gi|355477385|gb|AES58588.1| Ribosomal protein S10 [Medicago truncatula] Length = 1152 Score = 77.4 bits (189), Expect(2) = 5e-17 Identities = 37/37 (100%), Positives = 37/37 (100%) Frame = -1 Query: 254 ARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 144 ARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG Sbjct: 323 ARVVRCLVKSYNERNPRFVLLRHAPKEKVFATEVSRG 359 Score = 36.2 bits (82), Expect(2) = 5e-17 Identities = 22/42 (52%), Positives = 22/42 (52%) Frame = -3 Query: 465 ACGLIRYNAQNLTSP*HMNNKTSP*RDGTDFHTGAAWLSSAR 340 ACGLIRYNAQNLTS AAWLSSAR Sbjct: 303 ACGLIRYNAQNLTS--------------------AAWLSSAR 324 Score = 60.5 bits (145), Expect = 4e-07 Identities = 32/47 (68%), Positives = 33/47 (70%) Frame = -1 Query: 731 GLDTLVVHAVNDECSPLVYVDQGPS*RVKHSAWGVRSQDRNSKELTG 591 GLDTLVVHAVNDECSPLVYVDQGP +RNSKELTG Sbjct: 264 GLDTLVVHAVNDECSPLVYVDQGP--------------NRNSKELTG 296 >gb|ACA05077.1| hypothetical protein [Flammeovirga yaeyamensis] Length = 104 Score = 57.8 bits (138), Expect = 2e-06 Identities = 30/46 (65%), Positives = 32/46 (69%) Frame = +1 Query: 592 PVNSFEFRSCDRTPQAECFTR*LGP*ST*TKGEHSSFTAWTTRVSN 729 PVNSFEF C RTPQ E F+ LG T+ E SSFTAWTTRVSN Sbjct: 43 PVNSFEFHRCRRTPQVENFSVSLGLACQRTQAEFSSFTAWTTRVSN 88