BLASTX nr result

ID: Glycyrrhiza24_contig00012154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012154
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242688.1| uncharacterized protein LOC100802759 [Glycin...   214   4e-54
ref|XP_003526389.1| PREDICTED: LOW QUALITY PROTEIN: auxin-respon...   205   3e-51
ref|XP_003603373.1| Auxin-responsive protein IAA10 [Medicago tru...   177   6e-43
ref|XP_002309635.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
gb|AEX00367.1| IAA29 [Solanum lycopersicum]                           122   2e-26

>ref|NP_001242688.1| uncharacterized protein LOC100802759 [Glycine max]
           gi|255644559|gb|ACU22782.1| unknown [Glycine max]
          Length = 210

 Score =  214 bits (546), Expect = 4e-54
 Identities = 111/159 (69%), Positives = 128/159 (80%), Gaps = 1/159 (0%)
 Frame = +2

Query: 38  SKQIQIQSLESWTPSCCYENKKHV-NNKRSFEESFGNLIKKPLPLLVWSGQPNEEDDSSG 214
           +K  QI SL+ W  SC  E++K V +NKRSFEESFG+ +K PLPLLVWSGQPNEEDD S 
Sbjct: 21  NKSKQIVSLQLWRASCGSESEKRVKHNKRSFEESFGHFLK-PLPLLVWSGQPNEEDDRSE 79

Query: 215 NMHRHFHTSNKNNEEDNHLVGWPPIKSWRKKELHQQHPAGGHIRNDGMQQDNIENQSRGG 394
            + R+ H  NKN +E+NHLVGWPP+KSWR+KELHQQHPA G IRND +Q +  ENQSRG 
Sbjct: 80  KVQRNIHIPNKNGDEENHLVGWPPVKSWRRKELHQQHPARGRIRNDRIQAN--ENQSRGP 137

Query: 395 YSKPLYVKVNMEGVAIGRQINLRLYNSYQTLTDSLISMF 511
            S  LYVKVNMEGVAIGR+INLRL+NSYQTLT SLISMF
Sbjct: 138 NS--LYVKVNMEGVAIGRKINLRLFNSYQTLTSSLISMF 174


>ref|XP_003526389.1| PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA29-like
           [Glycine max]
          Length = 224

 Score =  205 bits (522), Expect = 3e-51
 Identities = 108/160 (67%), Positives = 127/160 (79%), Gaps = 2/160 (1%)
 Frame = +2

Query: 38  SKQIQIQSLESWTPSCCYENKKHV-NNKRSFEESFGNLIKKPLPLLVWSGQPNEEDDSSG 214
           +K  QI SLE W PSC  +++K V +NKRSFEESFG  +K P PLLVWSGQPNEE+D + 
Sbjct: 21  NKSKQIVSLELWRPSCGSDSEKRVKHNKRSFEESFGQFLK-PFPLLVWSGQPNEEEDRNE 79

Query: 215 NMHRHFHTSNKNNEEDNHLVGWPPIKSWRKKELH-QQHPAGGHIRNDGMQQDNIENQSRG 391
            + R+ HT NKN +E+NHLVGWPP+KSWR+KELH QQ+PA G IRND +Q +  ENQSR 
Sbjct: 80  KVQRNIHTPNKNGDEENHLVGWPPVKSWRRKELHRQQYPARGQIRNDRIQAN--ENQSRR 137

Query: 392 GYSKPLYVKVNMEGVAIGRQINLRLYNSYQTLTDSLISMF 511
             S  LYVKVNMEGVAIGR+INLRL+NSYQTLT SLISMF
Sbjct: 138 PNS--LYVKVNMEGVAIGRKINLRLFNSYQTLTSSLISMF 175


>ref|XP_003603373.1| Auxin-responsive protein IAA10 [Medicago truncatula]
           gi|355492421|gb|AES73624.1| Auxin-responsive protein
           IAA10 [Medicago truncatula]
          Length = 213

 Score =  177 bits (450), Expect = 6e-43
 Identities = 98/141 (69%), Positives = 105/141 (74%)
 Frame = +2

Query: 92  ENKKHVNNKRSFEESFGNLIKKPLPLLVWSGQPNEEDDSSGNMHRHFHTSNKNNEEDNHL 271
           EN K+V NKRSF+ESFG+   KPLPLLVWSGQPNEED  S   +R  HTSN  NE +NHL
Sbjct: 33  ENIKYVKNKRSFDESFGDF-SKPLPLLVWSGQPNEEDGRSEKKNRSIHTSN--NEGENHL 89

Query: 272 VGWPPIKSWRKKELHQQHPAGGHIRNDGMQQDNIENQSRGGYSKPLYVKVNMEGVAIGRQ 451
           VGWPPIKSWRKKE H Q     HIR         ENQ+R   SKPLYVKVNMEGV +GRQ
Sbjct: 90  VGWPPIKSWRKKEFHDQQ-LPEHIRKAN------ENQNRR--SKPLYVKVNMEGVGMGRQ 140

Query: 452 INLRLYNSYQTLTDSLISMFV 514
           INLRLYNSYQTL DSLISMFV
Sbjct: 141 INLRLYNSYQTLKDSLISMFV 161


>ref|XP_002309635.1| predicted protein [Populus trichocarpa] gi|222855611|gb|EEE93158.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  149 bits (375), Expect = 3e-34
 Identities = 90/173 (52%), Positives = 113/173 (65%), Gaps = 3/173 (1%)
 Frame = +2

Query: 2   EGFDPNSPGLIKSKQIQIQSLESWTPSCCYENKKHVNNKRSFEESFGNLIK---KPLPLL 172
           E FD N+ G     + Q+   + W  SC  E+  +++NKRSFE +F   IK   + LPLL
Sbjct: 16  ENFDLNNGGF--EPKDQMLGSKPWI-SC--EDGNYLDNKRSFEVAFEKNIKDASQELPLL 70

Query: 173 VWSGQPNEEDDSSGNMHRHFHTSNKNNEEDNHLVGWPPIKSWRKKELHQQHPAGGHIRND 352
           +WSGQPN+EDD +G   +   + NK++EE+N +VGWPPIKSWRKK LH QH A GH+ N 
Sbjct: 71  LWSGQPNDEDDWNGEK-KISRSINKDDEEENQVVGWPPIKSWRKKVLHHQHQA-GHVVN- 127

Query: 353 GMQQDNIENQSRGGYSKPLYVKVNMEGVAIGRQINLRLYNSYQTLTDSLISMF 511
             +     N   G  S   YVKV MEGVAI R+I+LRLYNSYQTLT SLISMF
Sbjct: 128 STRMATAGNYEYGTGSNSKYVKVKMEGVAITRKIDLRLYNSYQTLTKSLISMF 180


>gb|AEX00367.1| IAA29 [Solanum lycopersicum]
          Length = 227

 Score =  122 bits (307), Expect = 2e-26
 Identities = 67/144 (46%), Positives = 92/144 (63%), Gaps = 6/144 (4%)
 Frame = +2

Query: 98  KKHVNNKRSFEESF----GNLIKKPLPLLVWSGQPNEEDDSSGNMHRHFH-TSNKNNEED 262
           K  +  KR FEE+F    G + +K L L +W+GQPNE+DD+ G   + F+ T +K+ EE+
Sbjct: 36  KMKMKQKRCFEEAFHEDEGVVERKTLSLFIWNGQPNEDDDNHGRNKKPFNATCHKDFEEE 95

Query: 263 N-HLVGWPPIKSWRKKELHQQHPAGGHIRNDGMQQDNIENQSRGGYSKPLYVKVNMEGVA 439
           +  L+GWPPI +WRKK+ H Q  AG  I ND    +N  N    G    +YVKV MEGV 
Sbjct: 96  SLKLLGWPPINTWRKKQFHHQGHAGW-ITNDRNNNNNNNNNVIVGGRNSMYVKVKMEGVP 154

Query: 440 IGRQINLRLYNSYQTLTDSLISMF 511
           IGR+++LRLY+SYQ  T +L+ MF
Sbjct: 155 IGRKVDLRLYHSYQLFTQNLLQMF 178


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