BLASTX nr result

ID: Glycyrrhiza24_contig00012137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012137
         (1745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-...   729   0.0  
ref|XP_003549625.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-...   714   0.0  
ref|XP_003608971.1| RING finger protein [Medicago truncatula] gi...   673   0.0  
ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 ...   671   0.0  
ref|XP_002511411.1| protein binding protein, putative [Ricinus c...   665   0.0  

>ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
          Length = 382

 Score =  729 bits (1882), Expect = 0.0
 Identities = 352/382 (92%), Positives = 360/382 (94%), Gaps = 2/382 (0%)
 Frame = +3

Query: 273  MAIRGVDFKWYDGFFLSMLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVFIFRLLMFV 452
            MAIRGVDFKWYDGFFLSMLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVF+FRLLMFV
Sbjct: 1    MAIRGVDFKWYDGFFLSMLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVFVFRLLMFV 60

Query: 453  DNGFAAGMGLDFGWQQRYARFCGRVVVLSILALLLYPFLWAWTIIGTLWFSSSKNCLPEE 632
            DNG AAGMGLDFGWQQRYARFCGRVVV SIL LLLYPFLWAWT+IGTLWFSS+KNCLPE 
Sbjct: 61   DNGLAAGMGLDFGWQQRYARFCGRVVVFSILVLLLYPFLWAWTVIGTLWFSSAKNCLPEV 120

Query: 633  GQKWGFLIWLLFSYCGLLCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGILVDMIRVPDW 812
            G KWGFLIWLLFSYCGLLCIACMSLGKWLTRRQAHLLRAQQGIPVSEYG+LVDMIRVPDW
Sbjct: 121  GTKWGFLIWLLFSYCGLLCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGVLVDMIRVPDW 180

Query: 813  AFEAAGQETRGMGQDAAAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLE 992
            AFEAAGQETRGMGQDAAAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181  AFEAAGQETRGMGQDAAAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLE 240

Query: 993  EFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDTERSSA 1172
            EFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLR + E SSA
Sbjct: 241  EFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRAEPEESSA 300

Query: 1173 SVVTATRYVRGQPSSQSYRLRLQGLLRPVRSEIAEPVGDTDNALQNAENGVVPIVTRNAS 1352
            SVVT TRYVRGQPSSQSYRLRLQGLLRPV +EIA PVGD DN L+NAENG V IVT+NAS
Sbjct: 301  SVVTTTRYVRGQPSSQSYRLRLQGLLRPVGAEIAGPVGDIDNVLENAENGSVSIVTQNAS 360

Query: 1353 HRDQVSSVECMPVGV--SSAQS 1412
              D  SSVECMPV V  SSAQS
Sbjct: 361  SGDHASSVECMPVTVSHSSAQS 382


>ref|XP_003549625.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
          Length = 383

 Score =  714 bits (1842), Expect = 0.0
 Identities = 346/383 (90%), Positives = 360/383 (93%), Gaps = 3/383 (0%)
 Frame = +3

Query: 273  MAIRGVDFKWYDGFFLSMLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVFIFRLLMFV 452
            MAIRGVDFKWYDGFFL MLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVF+FR+LMFV
Sbjct: 1    MAIRGVDFKWYDGFFLFMLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVFVFRVLMFV 60

Query: 453  DNGFAAGMGLDFGWQQRYARFCGRVVVLSILALLLYPFLWAWTIIGTLWFSSSKNCLPEE 632
            DNG +AGMGLDFGWQQRYARFCGRVVVLSIL LLLYPFLWAWT+IGTLWFSS+KNCLPE 
Sbjct: 61   DNGLSAGMGLDFGWQQRYARFCGRVVVLSILVLLLYPFLWAWTVIGTLWFSSAKNCLPEV 120

Query: 633  GQKWGFLIWLLFSYCGLLCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGILVDMIRVPDW 812
            G+KWGFLIWLLFSYCGL CIACMSLGKWLTRRQAHLLRAQQGIPVSEYG+LVDMIRVPDW
Sbjct: 121  GKKWGFLIWLLFSYCGLFCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGVLVDMIRVPDW 180

Query: 813  AFEAAGQETRGMGQDAAAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLE 992
            AFEAAGQETRGMGQDAAAYHPGLYLTPAQREAVEALI ELPKFRLKAVPTDCSECPICLE
Sbjct: 181  AFEAAGQETRGMGQDAAAYHPGLYLTPAQREAVEALILELPKFRLKAVPTDCSECPICLE 240

Query: 993  EFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDTERSSA 1172
            EFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALS+LR + E+ SA
Sbjct: 241  EFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSSLRAEPEQFSA 300

Query: 1173 SVVTATRYVRGQPSSQSYRLRLQGLLRPVRSEIAEPVGDTDNALQNAENGVVPIVTRNAS 1352
            SVVT  RYVRGQPSS SYRLRLQGLL PVR+EIA PVGD DNAL+NA+NGVV IVT+NAS
Sbjct: 301  SVVTTARYVRGQPSSLSYRLRLQGLLCPVRAEIAGPVGDIDNALKNAQNGVVSIVTQNAS 360

Query: 1353 HR-DQVSSVECMPVGV--SSAQS 1412
               DQ SSVECMPV V  SSAQS
Sbjct: 361  SSGDQASSVECMPVTVCHSSAQS 383


>ref|XP_003608971.1| RING finger protein [Medicago truncatula] gi|355510026|gb|AES91168.1|
            RING finger protein [Medicago truncatula]
          Length = 365

 Score =  673 bits (1737), Expect(2) = 0.0
 Identities = 318/339 (93%), Positives = 330/339 (97%)
 Frame = +3

Query: 324  MLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVFIFRLLMFVDNGFAAGMGLDFGWQQR 503
            MLATSVVIVAINWKRYHSCTYPLHIWIVVDYT VF+FRLLMFVDNGFAAGMGLDFGWQQR
Sbjct: 1    MLATSVVIVAINWKRYHSCTYPLHIWIVVDYTAVFVFRLLMFVDNGFAAGMGLDFGWQQR 60

Query: 504  YARFCGRVVVLSILALLLYPFLWAWTIIGTLWFSSSKNCLPEEGQKWGFLIWLLFSYCGL 683
            YARFCGRVVVLSIL LLLYPFLWAWTIIGT+WFSS+K+CLPEEGQKWGFLIWLLFSYCGL
Sbjct: 61   YARFCGRVVVLSILGLLLYPFLWAWTIIGTMWFSSAKSCLPEEGQKWGFLIWLLFSYCGL 120

Query: 684  LCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGILVDMIRVPDWAFEAAGQETRGMGQDAA 863
            LCIACMS+GKWLTRRQAHL+RAQQGIP+SEYGILVDMIRVPDWAFEAAGQETRGMGQD A
Sbjct: 121  LCIACMSVGKWLTRRQAHLVRAQQGIPLSEYGILVDMIRVPDWAFEAAGQETRGMGQDTA 180

Query: 864  AYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFYVGNEVRGLPCAHNF 1043
            +YHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLEEF VGNEVRGLPCAHNF
Sbjct: 181  SYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLEEFRVGNEVRGLPCAHNF 240

Query: 1044 HVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDTERSSASVVTATRYVRGQPSSQS 1223
            HVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPD+ERSS SVVT TRYVRGQPSSQS
Sbjct: 241  HVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSDSVVTTTRYVRGQPSSQS 300

Query: 1224 YRLRLQGLLRPVRSEIAEPVGDTDNALQNAENGVVPIVT 1340
            Y LRLQGLLRPVR+EIA PVGDTDNALQNAENGV P++T
Sbjct: 301  YLLRLQGLLRPVRTEIAGPVGDTDNALQNAENGVAPVLT 339



 Score = 32.7 bits (73), Expect(2) = 0.0
 Identities = 14/26 (53%), Positives = 16/26 (61%)
 Frame = +2

Query: 1340 TKCIT*RPGLFCRMHACWCFLCTKLN 1417
            TKC    PGL   MHAC  F CTK++
Sbjct: 340  TKCTKQSPGLVGGMHACQSFFCTKVD 365


>ref|XP_002282957.1| PREDICTED: E3 ubiquitin-protein ligase SIS3 [Vitis vinifera]
          Length = 381

 Score =  671 bits (1732), Expect = 0.0
 Identities = 314/363 (86%), Positives = 339/363 (93%)
 Frame = +3

Query: 273  MAIRGVDFKWYDGFFLSMLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVFIFRLLMFV 452
            MAIRGVDFKWYDGFFLSMLATSV+IVAINWKRY  CTYPLHIWI+VDYTTVF+FRLLMFV
Sbjct: 1    MAIRGVDFKWYDGFFLSMLATSVIIVAINWKRYDLCTYPLHIWIMVDYTTVFVFRLLMFV 60

Query: 453  DNGFAAGMGLDFGWQQRYARFCGRVVVLSILALLLYPFLWAWTIIGTLWFSSSKNCLPEE 632
            DNG AAGMGLDFGWQQRYARFCGR+VVLSIL+LLLYPFLWAWT+IGTLWF+ +++CLPEE
Sbjct: 61   DNGLAAGMGLDFGWQQRYARFCGRIVVLSILSLLLYPFLWAWTVIGTLWFTRARDCLPEE 120

Query: 633  GQKWGFLIWLLFSYCGLLCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGILVDMIRVPDW 812
            GQKWGFLIWLLFSYCGLLCIACMS+GKW +RRQAHLLRAQQGIPVSEYG+LVDMIRVPDW
Sbjct: 121  GQKWGFLIWLLFSYCGLLCIACMSMGKWFSRRQAHLLRAQQGIPVSEYGVLVDMIRVPDW 180

Query: 813  AFEAAGQETRGMGQDAAAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLE 992
            AFEAAGQE RGMGQDAAAYHPGLYLTP QREAVEALIQELPKFRLKAVPTDCSECPICLE
Sbjct: 181  AFEAAGQEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKAVPTDCSECPICLE 240

Query: 993  EFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDTERSSA 1172
            EF+VGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSAL++ R D+ERSSA
Sbjct: 241  EFHVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALTHFRADSERSSA 300

Query: 1173 SVVTATRYVRGQPSSQSYRLRLQGLLRPVRSEIAEPVGDTDNALQNAENGVVPIVTRNAS 1352
            SVVTATRYVR QP SQ Y LRLQG LRPVR+E A    D DNAL+NAENG +P+VT + +
Sbjct: 301  SVVTATRYVRVQPPSQGYMLRLQGFLRPVRTENAGAGNDADNALENAENGGLPVVTDDLT 360

Query: 1353 HRD 1361
            + +
Sbjct: 361  NTE 363


>ref|XP_002511411.1| protein binding protein, putative [Ricinus communis]
            gi|223550526|gb|EEF52013.1| protein binding protein,
            putative [Ricinus communis]
          Length = 381

 Score =  665 bits (1716), Expect = 0.0
 Identities = 316/377 (83%), Positives = 337/377 (89%)
 Frame = +3

Query: 273  MAIRGVDFKWYDGFFLSMLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVFIFRLLMFV 452
            MAIRGVDFKWYDGFFLSMLATSVVIVAINWKRYH CTYPLHIWIVVDYTTVF+FRLLMF+
Sbjct: 1    MAIRGVDFKWYDGFFLSMLATSVVIVAINWKRYHHCTYPLHIWIVVDYTTVFVFRLLMFI 60

Query: 453  DNGFAAGMGLDFGWQQRYARFCGRVVVLSILALLLYPFLWAWTIIGTLWFSSSKNCLPEE 632
            DNG AAGMGLDFGWQQRYARFCGR+ VLSIL+LLLYPFLWAWTIIGTLWF+S+++CLPEE
Sbjct: 61   DNGLAAGMGLDFGWQQRYARFCGRIAVLSILSLLLYPFLWAWTIIGTLWFTSARDCLPEE 120

Query: 633  GQKWGFLIWLLFSYCGLLCIACMSLGKWLTRRQAHLLRAQQGIPVSEYGILVDMIRVPDW 812
            GQKWGFLIWL+FSYCGLLCIACM +GKWLTRRQAHLLRAQQGIP+SEYG+LVDM+RVPDW
Sbjct: 121  GQKWGFLIWLVFSYCGLLCIACMCMGKWLTRRQAHLLRAQQGIPISEYGVLVDMVRVPDW 180

Query: 813  AFEAAGQETRGMGQDAAAYHPGLYLTPAQREAVEALIQELPKFRLKAVPTDCSECPICLE 992
            AFEAAGQE RGMGQDAAAYHPGLYLTP QREAVEALIQELPKFRLK VPTDCSECPICLE
Sbjct: 181  AFEAAGQEMRGMGQDAAAYHPGLYLTPTQREAVEALIQELPKFRLKTVPTDCSECPICLE 240

Query: 993  EFYVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDTERSSA 1172
            EF+VGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLR D ER  A
Sbjct: 241  EFHVGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRADPERPPA 300

Query: 1173 SVVTATRYVRGQPSSQSYRLRLQGLLRPVRSEIAEPVGDTDNALQNAENGVVPIVTRNAS 1352
            + VT  RYVR QPSSQSY LRLQGLLRP+R+E A    D D  L+  E+G   + TR A 
Sbjct: 301  ADVTTNRYVRTQPSSQSYLLRLQGLLRPIRTEDAGSSSDVDVDLEAVEHGREVVATREAM 360

Query: 1353 HRDQVSSVECMPVGVSS 1403
              + VS V  M VG SS
Sbjct: 361  VMEPVSLVGSMLVGQSS 377


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