BLASTX nr result

ID: Glycyrrhiza24_contig00012064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012064
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613227.1| STAM-binding protein [Medicago truncatula] g...   227   3e-91
ref|XP_003517724.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   216   6e-88
ref|XP_002889820.1| hypothetical protein ARALYDRAFT_888336 [Arab...   148   1e-62
ref|NP_172530.2| AMSH-like ubiquitin thiolesterase 2 [Arabidopsi...   148   3e-62
ref|XP_003631259.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   156   8e-62

>ref|XP_003613227.1| STAM-binding protein [Medicago truncatula]
           gi|355514562|gb|AES96185.1| STAM-binding protein
           [Medicago truncatula] gi|388510592|gb|AFK43362.1|
           unknown [Medicago truncatula]
          Length = 235

 Score =  227 bits (578), Expect(2) = 3e-91
 Identities = 113/136 (83%), Positives = 119/136 (87%)
 Frame = +3

Query: 192 HKSFVDHKVTQSSPSPALCFVETMPQDAQNSHITAFNSGDGXXXXXXXXXXXKTMRDVHI 371
           +KSF+DHKVT+SSPSPALC VE + QD QNSHITAF+SGD            KT+RDVHI
Sbjct: 4   YKSFLDHKVTKSSPSPALCCVEPVTQDEQNSHITAFHSGDRSTNSDNESSSSKTVRDVHI 63

Query: 372 SMRLMEDFLDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSCQATNEEEV 551
           SMRLMEDFLDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSC ATNEEEV
Sbjct: 64  SMRLMEDFLDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSCNATNEEEV 123

Query: 552 FTILNERSLYPVGWIH 599
           FTILNERSLYPVGWIH
Sbjct: 124 FTILNERSLYPVGWIH 139



 Score =  135 bits (340), Expect(2) = 3e-91
 Identities = 60/67 (89%), Positives = 65/67 (97%)
 Frame = +2

Query: 686 MIPEAFAIVLAPNDTSRSCGLFRLTEPDGMDILKNCREKGFHPHKEPDSGNPVYEHCSNV 865
           MIPEAFAIVLAP DTSRSCGLFRLTEPDGM+IL+NC E+GFHPHKEPD+GNPVYEHCSNV
Sbjct: 162 MIPEAFAIVLAPTDTSRSCGLFRLTEPDGMNILRNCPERGFHPHKEPDNGNPVYEHCSNV 221

Query: 866 YKNSNLR 886
           Y+NSNLR
Sbjct: 222 YRNSNLR 228


>ref|XP_003517724.1| PREDICTED: AMSH-like ubiquitin thiolesterase 2-like [Glycine max]
          Length = 291

 Score =  216 bits (549), Expect(2) = 6e-88
 Identities = 109/136 (80%), Positives = 117/136 (86%)
 Frame = +3

Query: 192 HKSFVDHKVTQSSPSPALCFVETMPQDAQNSHITAFNSGDGXXXXXXXXXXXKTMRDVHI 371
           ++ F+  KVTQS PSPALCFVET+PQDAQ+SH+TAFNSGDG              RDVHI
Sbjct: 65  NRYFLLQKVTQSWPSPALCFVETVPQDAQSSHVTAFNSGDGSSKSDNE-------RDVHI 117

Query: 372 SMRLMEDFLDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSCQATNEEEV 551
           SMRLMEDFLDLAKENTEKDLETCGILGA+LEKGTLY+TTLIIPKQESASNSCQATNEEEV
Sbjct: 118 SMRLMEDFLDLAKENTEKDLETCGILGAYLEKGTLYLTTLIIPKQESASNSCQATNEEEV 177

Query: 552 FTILNERSLYPVGWIH 599
           F ILNERSLYPVGWIH
Sbjct: 178 FKILNERSLYPVGWIH 193



 Score =  135 bits (340), Expect(2) = 6e-88
 Identities = 60/68 (88%), Positives = 67/68 (98%)
 Frame = +2

Query: 683 MMIPEAFAIVLAPNDTSRSCGLFRLTEPDGMDILKNCREKGFHPHKEPDSGNPVYEHCSN 862
           +MIPEAFAIVLAPNDTSRSCGLFRLT+P+GM+ILKNC+E GFHPHKEPD+G+PVYEHCSN
Sbjct: 215 VMIPEAFAIVLAPNDTSRSCGLFRLTKPEGMNILKNCQETGFHPHKEPDNGSPVYEHCSN 274

Query: 863 VYKNSNLR 886
           VYKNSNLR
Sbjct: 275 VYKNSNLR 282


>ref|XP_002889820.1| hypothetical protein ARALYDRAFT_888336 [Arabidopsis lyrata subsp.
           lyrata] gi|297335662|gb|EFH66079.1| hypothetical protein
           ARALYDRAFT_888336 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score =  148 bits (373), Expect(2) = 1e-62
 Identities = 77/128 (60%), Positives = 90/128 (70%)
 Frame = +3

Query: 216 VTQSSPSPALCFVETMPQDAQNSHITAFNSGDGXXXXXXXXXXXKTMRDVHISMRLMEDF 395
           VT SSPSP+L  VE +    ++SH++                  K +RDVHIS RL+EDF
Sbjct: 2   VTLSSPSPSLSCVENVT--CKSSHVSRVLISGTDKNNHGESSEPKILRDVHISERLLEDF 59

Query: 396 LDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSCQATNEEEVFTILNERS 575
            +LA+ENTEKDLETCG L AFLE+G  Y+TTLIIPKQES SNSCQA NE EVF+I NER 
Sbjct: 60  TELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNEVEVFSIQNERE 119

Query: 576 LYPVGWIH 599
           LYPVGWIH
Sbjct: 120 LYPVGWIH 127



 Score =  119 bits (297), Expect(2) = 1e-62
 Identities = 50/68 (73%), Positives = 61/68 (89%)
 Frame = +2

Query: 683 MMIPEAFAIVLAPNDTSRSCGLFRLTEPDGMDILKNCREKGFHPHKEPDSGNPVYEHCSN 862
           +M+PEAFAIV+AP D+S+S G+F+LT+P GM++LK C E GFHPHKEP+ GNPVYEHCSN
Sbjct: 149 VMVPEAFAIVVAPTDSSKSYGIFKLTDPGGMEVLKGCSETGFHPHKEPEDGNPVYEHCSN 208

Query: 863 VYKNSNLR 886
           VYKNSNLR
Sbjct: 209 VYKNSNLR 216


>ref|NP_172530.2| AMSH-like ubiquitin thiolesterase 2 [Arabidopsis thaliana]
           gi|75271673|sp|Q6NKP9.1|AMSH2_ARATH RecName:
           Full=AMSH-like ubiquitin thioesterase 2; AltName:
           Full=Deubiquitinating enzyme AMSH2
           gi|46931320|gb|AAT06464.1| At1g10600 [Arabidopsis
           thaliana] gi|51969058|dbj|BAD43221.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332190485|gb|AEE28606.1| AMSH-like ubiquitin
           thiolesterase 2 [Arabidopsis thaliana]
          Length = 223

 Score =  148 bits (373), Expect(2) = 3e-62
 Identities = 77/128 (60%), Positives = 90/128 (70%)
 Frame = +3

Query: 216 VTQSSPSPALCFVETMPQDAQNSHITAFNSGDGXXXXXXXXXXXKTMRDVHISMRLMEDF 395
           VT SSPSP+L  VE +    ++SH++                  K +RDVHIS RL+EDF
Sbjct: 2   VTLSSPSPSLSCVENVT--CKSSHVSRVLISGTDNINHGESSEAKILRDVHISERLLEDF 59

Query: 396 LDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSCQATNEEEVFTILNERS 575
            +LA+ENTEKDLETCG L AFLE+G  Y+TTLIIPKQES SNSCQA NE EVF+I NER 
Sbjct: 60  TELARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNEVEVFSIQNERE 119

Query: 576 LYPVGWIH 599
           LYPVGWIH
Sbjct: 120 LYPVGWIH 127



 Score =  117 bits (294), Expect(2) = 3e-62
 Identities = 49/68 (72%), Positives = 61/68 (89%)
 Frame = +2

Query: 683 MMIPEAFAIVLAPNDTSRSCGLFRLTEPDGMDILKNCREKGFHPHKEPDSGNPVYEHCSN 862
           +M+PEAFAIV+AP D+S+S G+F+LT+P GM++L+ C E GFHPHKEP+ GNPVYEHCSN
Sbjct: 149 VMVPEAFAIVVAPTDSSKSYGIFKLTDPGGMEVLRGCSETGFHPHKEPEDGNPVYEHCSN 208

Query: 863 VYKNSNLR 886
           VYKNSNLR
Sbjct: 209 VYKNSNLR 216


>ref|XP_003631259.1| PREDICTED: AMSH-like ubiquitin thiolesterase 2-like [Vitis
           vinifera] gi|297739036|emb|CBI28525.3| unnamed protein
           product [Vitis vinifera]
          Length = 275

 Score =  156 bits (395), Expect(2) = 8e-62
 Identities = 79/140 (56%), Positives = 93/140 (66%)
 Frame = +3

Query: 180 MVAVHKSFVDHKVTQSSPSPALCFVETMPQDAQNSHITAFNSGDGXXXXXXXXXXXKTMR 359
           M A       H VT++SPSP +   E    D   SHI   +S  G           K ++
Sbjct: 40  MTASEHCITVHAVTKASPSPIIYCTENAHHDKHISHIEVSDSEPGHSKSCSETAVSKKLQ 99

Query: 360 DVHISMRLMEDFLDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSCQATN 539
           DVHIS RLMEDFL+LA++NT+ DLETCGILGAFL+ GT Y+TTLIIPKQES SNSCQA  
Sbjct: 100 DVHISARLMEDFLELARDNTKNDLETCGILGAFLKMGTFYVTTLIIPKQESTSNSCQAIK 159

Query: 540 EEEVFTILNERSLYPVGWIH 599
           EEE+F I NE SL+PVGWIH
Sbjct: 160 EEEIFAIQNEHSLFPVGWIH 179



 Score =  107 bits (268), Expect(2) = 8e-62
 Identities = 46/68 (67%), Positives = 57/68 (83%)
 Frame = +2

Query: 683 MMIPEAFAIVLAPNDTSRSCGLFRLTEPDGMDILKNCREKGFHPHKEPDSGNPVYEHCSN 862
           +M+PEAFAIV+AP DTSRS G+FRL++P GM +LK+C E+GFH H EP  G P+YEHCSN
Sbjct: 201 VMVPEAFAIVMAPTDTSRSYGIFRLSDPVGMSVLKDCPEEGFHHHNEPADGGPIYEHCSN 260

Query: 863 VYKNSNLR 886
           +Y NSNLR
Sbjct: 261 IYINSNLR 268


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