BLASTX nr result

ID: Glycyrrhiza24_contig00012045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012045
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613044.1| SGT1-like protein [Medicago truncatula] gi|3...   179   2e-43
gb|AFK37682.1| unknown [Lotus japonicus]                              166   2e-39
ref|XP_003534243.1| PREDICTED: protein SGT1 homolog At5g65490-li...   164   9e-39
emb|CAN64607.1| hypothetical protein VITISV_030583 [Vitis vinifera]   139   3e-31
ref|XP_004133748.1| PREDICTED: protein SGT1 homolog At5g65490-li...   137   7e-31

>ref|XP_003613044.1| SGT1-like protein [Medicago truncatula] gi|355514379|gb|AES96002.1|
           SGT1-like protein [Medicago truncatula]
          Length = 654

 Score =  179 bits (454), Expect = 2e-43
 Identities = 95/136 (69%), Positives = 100/136 (73%)
 Frame = -2

Query: 447 LKRPGEASNSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTFTQSYSDVMNEELKATT 268
           +KRPGEA NSNI                             D F QSYSD MNE+LKATT
Sbjct: 519 MKRPGEADNSNIEEGSSSDLDFDDSDESDGVESAEDNDDEEDAFVQSYSDAMNEQLKATT 578

Query: 267 LQKSFVRANEQIPRKDEGTSNATEDMDEDFSPVDVDVNLVKSFLDSFSSQQGLPGPASNL 88
           LQKSFVRA+EQIP+KDEGTS+A EDMDEDFSPVDVDVNLVKS LDSFSSQQGLPGPASNL
Sbjct: 579 LQKSFVRASEQIPKKDEGTSHAAEDMDEDFSPVDVDVNLVKSLLDSFSSQQGLPGPASNL 638

Query: 87  LGLMGVQFPQDAKKGK 40
           LGLMGVQFPQDAKK K
Sbjct: 639 LGLMGVQFPQDAKKSK 654


>gb|AFK37682.1| unknown [Lotus japonicus]
          Length = 108

 Score =  166 bits (420), Expect = 2e-39
 Identities = 85/94 (90%), Positives = 88/94 (93%)
 Frame = -2

Query: 321 TFTQSYSDVMNEELKATTLQKSFVRANEQIPRKDEGTSNATEDMDEDFSPVDVDVNLVKS 142
           TF QSYSD MNEELKATTLQKSFVRANEQIP K EGTS+A EDMDE+FSPVDVDVNLVKS
Sbjct: 16  TFRQSYSDAMNEELKATTLQKSFVRANEQIP-KHEGTSHAAEDMDEEFSPVDVDVNLVKS 74

Query: 141 FLDSFSSQQGLPGPASNLLGLMGVQFPQDAKKGK 40
            LDSFS+QQGLPGPASNLLGLMGVQFPQDAKKGK
Sbjct: 75  LLDSFSTQQGLPGPASNLLGLMGVQFPQDAKKGK 108


>ref|XP_003534243.1| PREDICTED: protein SGT1 homolog At5g65490-like [Glycine max]
          Length = 645

 Score =  164 bits (414), Expect = 9e-39
 Identities = 90/133 (67%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
 Frame = -2

Query: 435 GEASNSNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTFTQSYSDVMNEELKATTLQKS 256
           GE +NSNI                             D F +SYSD MNEELKATTLQKS
Sbjct: 513 GEVANSNIEEGSSSDLDFDNSDDSDIVELDEDNEDREDIFMRSYSDAMNEELKATTLQKS 572

Query: 255 FVRANEQIPRKDEGTSNATED-MDEDFSPVDVDVNLVKSFLDSFSSQQGLPGPASNLLGL 79
           FVRANEQIP+KD+GTSNA+E  MDEDFSPVDVDVNLVKS LDSFSSQQGLPGPASNLLGL
Sbjct: 573 FVRANEQIPKKDQGTSNASEHIMDEDFSPVDVDVNLVKSLLDSFSSQQGLPGPASNLLGL 632

Query: 78  MGVQFPQDAKKGK 40
           MGVQ PQD KKGK
Sbjct: 633 MGVQLPQDGKKGK 645


>emb|CAN64607.1| hypothetical protein VITISV_030583 [Vitis vinifera]
          Length = 933

 Score =  139 bits (349), Expect = 3e-31
 Identities = 67/85 (78%), Positives = 78/85 (91%)
 Frame = -2

Query: 318 FTQSYSDVMNEELKATTLQKSFVRANEQIPRKDEGTSNATEDMDEDFSPVDVDVNLVKSF 139
           F QSYSD +NEELK++TL+KSFVRANEQ   ++EGTSNATEDMD++F+PVDVDVNLVKSF
Sbjct: 555 FMQSYSDALNEELKSSTLKKSFVRANEQPNNRNEGTSNATEDMDDEFTPVDVDVNLVKSF 614

Query: 138 LDSFSSQQGLPGPASNLLGLMGVQF 64
           LDSF+SQQGLPGPASNLLGLMG  +
Sbjct: 615 LDSFASQQGLPGPASNLLGLMGTGY 639


>ref|XP_004133748.1| PREDICTED: protein SGT1 homolog At5g65490-like [Cucumis sativus]
           gi|449478085|ref|XP_004155218.1| PREDICTED: protein SGT1
           homolog At5g65490-like [Cucumis sativus]
          Length = 653

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/93 (69%), Positives = 81/93 (87%)
 Frame = -2

Query: 318 FTQSYSDVMNEELKATTLQKSFVRANEQIPRKDEGTSNATEDMDEDFSPVDVDVNLVKSF 139
           F +SYSD ++EELK++TL+KSF RA+ +  +KDEGTSNAT+ M+EDF+PVDVDVNLVKS 
Sbjct: 561 FMESYSDTLDEELKSSTLKKSFYRASGETSQKDEGTSNATDHMEEDFTPVDVDVNLVKSL 620

Query: 138 LDSFSSQQGLPGPASNLLGLMGVQFPQDAKKGK 40
           LDSFSSQ+GLPGP SNLLGLMG++ P+D  KGK
Sbjct: 621 LDSFSSQEGLPGPTSNLLGLMGLKLPRDGDKGK 653


Top