BLASTX nr result

ID: Glycyrrhiza24_contig00012041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012041
         (1044 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU23921.1| unknown [Glycine max]                                  395   e-108
ref|XP_003538044.1| PREDICTED: 39S ribosomal protein L28, mitoch...   394   e-107
gb|AFK45117.1| unknown [Lotus japonicus]                              385   e-105
ref|XP_003588460.1| 50S ribosomal protein L28 [Medicago truncatu...   385   e-104
gb|AFK38646.1| unknown [Lotus japonicus]                              384   e-104

>gb|ACU23921.1| unknown [Glycine max]
          Length = 235

 Score =  395 bits (1016), Expect = e-108
 Identities = 199/235 (84%), Positives = 213/235 (90%), Gaps = 4/235 (1%)
 Frame = -2

Query: 911 MAFRGREMMKKVLKKVGEKSLGRGVKESLERNIPRSKVVMSRAKRGLYAGRHIQFGNSVS 732
           MAFRG+EMMKKVLK VGE  L R  KESLER +PRSK+VM+RAKRGL+AG+HIQFGN VS
Sbjct: 1   MAFRGKEMMKKVLKTVGENGLSRREKESLERCLPRSKIVMNRAKRGLFAGKHIQFGNRVS 60

Query: 731 EDGGNKTRRTWKPNVQEKRLFSYVLDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYRKMD 552
           EDGGNK+RRTWKPNVQEKRLFSY+LDRH+RVKVTTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 551 TEIGLLWKAKIEKLYEELGNKEVVFFSPEDEAKFEQGFKDLKLSEREARKEVRRKMYAGI 372
           TE+G+LWKAKIEKLYEELGNKEVVFFSPEDE KFEQ F+DLKLSEREARKEVRRKMY G+
Sbjct: 121 TEMGILWKAKIEKLYEELGNKEVVFFSPEDEVKFEQEFEDLKLSEREARKEVRRKMYTGM 180

Query: 371 SKHKLIEVESKD----DEGGTKIEEEISHDSSKQLVPVSYVLAADKLKPGSYVSN 219
           SK KLIEVE KD    DEGG KIE EISHDSSKQ+VPVSYVLAADKLK GS VSN
Sbjct: 181 SKQKLIEVERKDDQCIDEGGNKIEGEISHDSSKQVVPVSYVLAADKLKVGSVVSN 235


>ref|XP_003538044.1| PREDICTED: 39S ribosomal protein L28, mitochondrial-like [Glycine
           max]
          Length = 235

 Score =  394 bits (1011), Expect = e-107
 Identities = 195/235 (82%), Positives = 214/235 (91%), Gaps = 4/235 (1%)
 Frame = -2

Query: 911 MAFRGREMMKKVLKKVGEKSLGRGVKESLERNIPRSKVVMSRAKRGLYAGRHIQFGNSVS 732
           MAFRG+EM+KKVLK VGE  L R  KESLER +PRSK+VM+RAKRGL+AG+HIQFGN VS
Sbjct: 1   MAFRGKEMLKKVLKTVGENGLSRREKESLERCLPRSKIVMNRAKRGLFAGKHIQFGNRVS 60

Query: 731 EDGGNKTRRTWKPNVQEKRLFSYVLDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYRKMD 552
           EDGGNK+RRTWKPNVQEKRLFSY+LDRH+RVK+TTHALRCIDKAGGIDEYL+KTPY KMD
Sbjct: 61  EDGGNKSRRTWKPNVQEKRLFSYILDRHVRVKITTHALRCIDKAGGIDEYLMKTPYHKMD 120

Query: 551 TEIGLLWKAKIEKLYEELGNKEVVFFSPEDEAKFEQGFKDLKLSEREARKEVRRKMYAGI 372
           TE+G+LWKAKIEKLYEELGNKEVVFFSPEDEAKFEQ F DLKL+EREARKEVRRKMY G+
Sbjct: 121 TEMGILWKAKIEKLYEELGNKEVVFFSPEDEAKFEQEFNDLKLTEREARKEVRRKMYTGM 180

Query: 371 SKHKLIEVESKD----DEGGTKIEEEISHDSSKQLVPVSYVLAADKLKPGSYVSN 219
           SKHKLIEVE KD    DEGG KI+ EISHDSSK++VPVSYVLAADKLK GS VSN
Sbjct: 181 SKHKLIEVERKDDQTIDEGGNKIDVEISHDSSKRVVPVSYVLAADKLKVGSVVSN 235


>gb|AFK45117.1| unknown [Lotus japonicus]
          Length = 235

 Score =  385 bits (990), Expect = e-105
 Identities = 192/235 (81%), Positives = 211/235 (89%), Gaps = 4/235 (1%)
 Frame = -2

Query: 911 MAFRGREMMKKVLKKVGEKSLGRGVKESLERNIPRSKVVMSRAKRGLYAGRHIQFGNSVS 732
           MAFRG+EMMKKVLKKVGEK+L    KESL++ IP++K+VM RAKRGL+AGRHIQFGN+VS
Sbjct: 1   MAFRGKEMMKKVLKKVGEKNLSPKSKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTVS 60

Query: 731 EDGGNKTRRTWKPNVQEKRLFSYVLDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYRKMD 552
           EDGGNKTRR WKPNVQ+KRLFSY+LDRHIR KVTTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKTRRNWKPNVQDKRLFSYILDRHIRAKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 551 TEIGLLWKAKIEKLYEELGNKEVVFFSPEDEAKFEQGFKDLKLSEREARKEVRRKMYAGI 372
           TEIG+LW+AKIEKLYEELG KEVVFFSPEDEA FEQ FKDLKLSEREARKE+R+ MYAG+
Sbjct: 121 TEIGVLWRAKIEKLYEELGKKEVVFFSPEDEANFEQSFKDLKLSEREARKEIRKIMYAGM 180

Query: 371 SKHKLIEVESKDD----EGGTKIEEEISHDSSKQLVPVSYVLAADKLKPGSYVSN 219
            KHKLI V+ KDD    EGGTK EEE SHDSSK++VPVSYVLA DKLK GSYVSN
Sbjct: 181 GKHKLIGVDRKDDQSIEEGGTKNEEETSHDSSKRVVPVSYVLAPDKLKIGSYVSN 235


>ref|XP_003588460.1| 50S ribosomal protein L28 [Medicago truncatula]
           gi|355477508|gb|AES58711.1| 50S ribosomal protein L28
           [Medicago truncatula]
          Length = 232

 Score =  385 bits (988), Expect = e-104
 Identities = 190/232 (81%), Positives = 215/232 (92%), Gaps = 1/232 (0%)
 Frame = -2

Query: 911 MAFRGREMMKKVLKKVGEKSLGRGVKESLERNIPRSKVVMSRAKRGLYAGRHIQFGNSVS 732
           MAFRG+EMMKKVLKKVG+K+L    KES+E+ +P++KVVM RAKRGL+AG+HIQFGNSVS
Sbjct: 1   MAFRGKEMMKKVLKKVGDKNLTPRAKESIEKWLPKNKVVMGRAKRGLFAGKHIQFGNSVS 60

Query: 731 EDGGNKTRRTWKPNVQEKRLFSYVLDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYRKMD 552
           EDGGN+TRRTWKPNVQ+KRLFSY+LDRHIR+KVTTHALRCIDKAGGIDEYLLKTPY+KMD
Sbjct: 61  EDGGNRTRRTWKPNVQDKRLFSYILDRHIRIKVTTHALRCIDKAGGIDEYLLKTPYQKMD 120

Query: 551 TEIGLLWKAKIEKLYEELGNKEVVFFSPEDEAKFEQGFKDLKLSEREARKEVRRKMYAGI 372
           TEIG+LWK+KIEKLYEELG KEVVFFSPEDEAKFEQGFKDL+LSEREARKEVR+ M+A +
Sbjct: 121 TEIGVLWKSKIEKLYEELGKKEVVFFSPEDEAKFEQGFKDLRLSEREARKEVRKIMHASM 180

Query: 371 SKHKLIEVESKD-DEGGTKIEEEISHDSSKQLVPVSYVLAADKLKPGSYVSN 219
           +KHKLIEVESKD DEG  KIE EIS DSSK+LVPVSYVLA D+LK G Y+SN
Sbjct: 181 NKHKLIEVESKDGDEGAAKIEGEISLDSSKRLVPVSYVLAPDRLKVGDYISN 232


>gb|AFK38646.1| unknown [Lotus japonicus]
          Length = 235

 Score =  384 bits (986), Expect = e-104
 Identities = 192/235 (81%), Positives = 210/235 (89%), Gaps = 4/235 (1%)
 Frame = -2

Query: 911 MAFRGREMMKKVLKKVGEKSLGRGVKESLERNIPRSKVVMSRAKRGLYAGRHIQFGNSVS 732
           MAFRG+EMMKKVLKKVGEK+L    KESL++ IP++K+VM RAKRGL+AGRHIQFGN+VS
Sbjct: 1   MAFRGKEMMKKVLKKVGEKNLTPKAKESLQKCIPKTKIVMGRAKRGLFAGRHIQFGNTVS 60

Query: 731 EDGGNKTRRTWKPNVQEKRLFSYVLDRHIRVKVTTHALRCIDKAGGIDEYLLKTPYRKMD 552
           EDGGNKTRR WKPNVQ+KRLFSY+LDRHIR KVTTHALRCIDKAGGIDEYLLKTPY KMD
Sbjct: 61  EDGGNKTRRNWKPNVQDKRLFSYILDRHIRAKVTTHALRCIDKAGGIDEYLLKTPYHKMD 120

Query: 551 TEIGLLWKAKIEKLYEELGNKEVVFFSPEDEAKFEQGFKDLKLSEREARKEVRRKMYAGI 372
           TEIG+LWKAKIEKLYEELG KEVVFFSPEDEA FEQ FKDLKLSEREARKE+R+ MYAG+
Sbjct: 121 TEIGVLWKAKIEKLYEELGKKEVVFFSPEDEANFEQSFKDLKLSEREARKEIRKIMYAGM 180

Query: 371 SKHKLIEVESKDD----EGGTKIEEEISHDSSKQLVPVSYVLAADKLKPGSYVSN 219
            KHKLI VE K D    EGGTK EEE SHDS+K++VPVSYVLA DKLK GSYVSN
Sbjct: 181 GKHKLIGVERKGDQSIEEGGTKNEEETSHDSTKRVVPVSYVLAPDKLKIGSYVSN 235


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