BLASTX nr result

ID: Glycyrrhiza24_contig00012023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012023
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523081.1| PREDICTED: dof zinc finger protein DOF5.6 [G...   150   1e-34
gb|ABI16015.1| Dof14, partial [Glycine max]                           150   1e-34
ref|XP_003527017.1| PREDICTED: dof zinc finger protein DOF5.6-li...   145   3e-33
ref|XP_003525503.1| PREDICTED: dof zinc finger protein DOF5.6-li...   135   5e-30
ref|XP_002318052.1| f-box family protein [Populus trichocarpa] g...   134   6e-30

>ref|XP_003523081.1| PREDICTED: dof zinc finger protein DOF5.6 [Glycine max]
          Length = 344

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/88 (81%), Positives = 73/88 (82%)
 Frame = -3

Query: 266 MGLSSLHVCMESSADHWLQGTIHEEXXXXXXXXXXXXXMLTCSRPMIERRLRPPHDQALK 87
           MGLSSLHVCM+SS DHWLQGTIHEE              LTCSRPMIERRLRPPHDQALK
Sbjct: 1   MGLSSLHVCMDSS-DHWLQGTIHEESGMDSSSSPSGDM-LTCSRPMIERRLRPPHDQALK 58

Query: 86  CPRCDSTHTKFCYYNNYSLSQPRYFCKT 3
           CPRCDSTHTKFCYYNNYSLSQPRYFCKT
Sbjct: 59  CPRCDSTHTKFCYYNNYSLSQPRYFCKT 86


>gb|ABI16015.1| Dof14, partial [Glycine max]
          Length = 174

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/88 (81%), Positives = 73/88 (82%)
 Frame = -3

Query: 266 MGLSSLHVCMESSADHWLQGTIHEEXXXXXXXXXXXXXMLTCSRPMIERRLRPPHDQALK 87
           MGLSSLHVCM+SS DHWLQGTIHEE              LTCSRPMIERRLRPPHDQALK
Sbjct: 1   MGLSSLHVCMDSS-DHWLQGTIHEESGMDSSSSPSGDM-LTCSRPMIERRLRPPHDQALK 58

Query: 86  CPRCDSTHTKFCYYNNYSLSQPRYFCKT 3
           CPRCDSTHTKFCYYNNYSLSQPRYFCKT
Sbjct: 59  CPRCDSTHTKFCYYNNYSLSQPRYFCKT 86


>ref|XP_003527017.1| PREDICTED: dof zinc finger protein DOF5.6-like [Glycine max]
          Length = 353

 Score =  145 bits (367), Expect = 3e-33
 Identities = 70/88 (79%), Positives = 72/88 (81%)
 Frame = -3

Query: 266 MGLSSLHVCMESSADHWLQGTIHEEXXXXXXXXXXXXXMLTCSRPMIERRLRPPHDQALK 87
           MGLSSLHVCM+SS DHWLQGTIHEE              LTCSRPMIERRLRPPHD ALK
Sbjct: 1   MGLSSLHVCMDSS-DHWLQGTIHEESGMDSSSSPSGDM-LTCSRPMIERRLRPPHDLALK 58

Query: 86  CPRCDSTHTKFCYYNNYSLSQPRYFCKT 3
           CPRC+STHTKFCYYNNYSLSQPRYFCKT
Sbjct: 59  CPRCESTHTKFCYYNNYSLSQPRYFCKT 86


>ref|XP_003525503.1| PREDICTED: dof zinc finger protein DOF5.6-like [Glycine max]
          Length = 330

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/88 (72%), Positives = 68/88 (77%)
 Frame = -3

Query: 266 MGLSSLHVCMESSADHWLQGTIHEEXXXXXXXXXXXXXMLTCSRPMIERRLRPPHDQALK 87
           MG SSLHVCM+SS DHW+QGTIHEE              L CSRPM E RLRPP +QALK
Sbjct: 1   MGFSSLHVCMDSS-DHWMQGTIHEECGVDNSSSPSGEM-LPCSRPMTESRLRPPQEQALK 58

Query: 86  CPRCDSTHTKFCYYNNYSLSQPRYFCKT 3
           CPRC+STHTKFCYYNNYSLSQPRYFCKT
Sbjct: 59  CPRCESTHTKFCYYNNYSLSQPRYFCKT 86


>ref|XP_002318052.1| f-box family protein [Populus trichocarpa]
           gi|222858725|gb|EEE96272.1| f-box family protein
           [Populus trichocarpa]
          Length = 312

 Score =  134 bits (338), Expect = 6e-30
 Identities = 65/88 (73%), Positives = 70/88 (79%)
 Frame = -3

Query: 266 MGLSSLHVCMESSADHWLQGTIHEEXXXXXXXXXXXXXMLTCSRPMIERRLRPPHDQALK 87
           MGL+SL VCM+SS   WLQGTI++E              LTCSRP+IERRLRPPHDQALK
Sbjct: 1   MGLTSLQVCMDSS--DWLQGTINDESGMDSSSPSGDM--LTCSRPLIERRLRPPHDQALK 56

Query: 86  CPRCDSTHTKFCYYNNYSLSQPRYFCKT 3
           CPRCDSTHTKFCYYNNYSLSQPRYFCKT
Sbjct: 57  CPRCDSTHTKFCYYNNYSLSQPRYFCKT 84


Top