BLASTX nr result

ID: Glycyrrhiza24_contig00012009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00012009
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [...   287   2e-75
ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [...   286   4e-75
ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncat...   286   4e-75
sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1...   276   2e-72
ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis...   272   4e-71

>ref|XP_003521979.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 614

 Score =  287 bits (734), Expect = 2e-75
 Identities = 143/170 (84%), Positives = 147/170 (86%)
 Frame = +2

Query: 2   ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY 181
           ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY
Sbjct: 327 ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY 386

Query: 182 VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKGLKIMNLGDSKP 361
           VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLY FISSKGLKIMNLGD++P
Sbjct: 387 VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYEFISSKGLKIMNLGDAQP 446

Query: 362 TVGMAKVLENDDDDAVDPHLERIRNXXXXXXXXXXXXXXXXXXXXXGSPT 511
           TVG+ KVLENDDDDAVDPHLERI+N                     GSPT
Sbjct: 447 TVGIKKVLENDDDDAVDPHLERIKNEAGEDESDEEDSDFVADKDDEGSPT 496


>ref|XP_003517023.1| PREDICTED: FACT complex subunit SSRP1-like [Glycine max]
          Length = 640

 Score =  286 bits (731), Expect = 4e-75
 Identities = 142/170 (83%), Positives = 147/170 (86%)
 Frame = +2

Query: 2   ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY 181
           ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY
Sbjct: 327 ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY 386

Query: 182 VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKGLKIMNLGDSKP 361
           VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLY FISSKGLKI+NLGD++P
Sbjct: 387 VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYEFISSKGLKILNLGDAQP 446

Query: 362 TVGMAKVLENDDDDAVDPHLERIRNXXXXXXXXXXXXXXXXXXXXXGSPT 511
           TVG+ KVLENDDDDAVDPHLERI+N                     GSPT
Sbjct: 447 TVGIKKVLENDDDDAVDPHLERIKNEAGGDESDEEDSDFVADKDDEGSPT 496


>ref|XP_003616631.1| FACT complex subunit SSRP1 [Medicago truncatula]
           gi|355517966|gb|AES99589.1| FACT complex subunit SSRP1
           [Medicago truncatula]
          Length = 648

 Score =  286 bits (731), Expect = 4e-75
 Identities = 141/170 (82%), Positives = 146/170 (85%)
 Frame = +2

Query: 2   ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY 181
           +LRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLI HEEIDY
Sbjct: 327 VLRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLITHEEIDY 386

Query: 182 VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKGLKIMNLGDSKP 361
           VEFERHAAGGSNMHYFDLLIRLKS+QEHLFRNIQRNEYHNLYGFISSKGLKIMNLGD++P
Sbjct: 387 VEFERHAAGGSNMHYFDLLIRLKSDQEHLFRNIQRNEYHNLYGFISSKGLKIMNLGDAQP 446

Query: 362 TVGMAKVLENDDDDAVDPHLERIRNXXXXXXXXXXXXXXXXXXXXXGSPT 511
           T G+AKVLE DDDDAVDPHLERIRN                     GSPT
Sbjct: 447 TTGVAKVLEGDDDDAVDPHLERIRNEAGEDESDEEDEDFVAEKDDEGSPT 496


>sp|O04235.1|SSRP1_VICFA RecName: Full=FACT complex subunit SSRP1; AltName: Full=Facilitates
           chromatin transcription complex subunit SSRP1; AltName:
           Full=Recombination signal sequence recognition protein 1
           gi|2104679|emb|CAA66480.1| transcription factor [Vicia
           faba var. minor]
          Length = 642

 Score =  276 bits (707), Expect = 2e-72
 Identities = 139/171 (81%), Positives = 144/171 (84%), Gaps = 1/171 (0%)
 Frame = +2

Query: 2   ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY 181
           +LRGLSG KVTKPG FRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY
Sbjct: 327 VLRGLSGGKVTKPGNFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY 386

Query: 182 VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKGLKIMNLGDSKP 361
           VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKGLKIMN+ D++ 
Sbjct: 387 VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKGLKIMNIADAQQ 446

Query: 362 TV-GMAKVLENDDDDAVDPHLERIRNXXXXXXXXXXXXXXXXXXXXXGSPT 511
            V G+AKVLENDDDDAVDPHLERIRN                     GSPT
Sbjct: 447 AVGGVAKVLENDDDDAVDPHLERIRNEAGGDESDEEDSDFVIDKDDGGSPT 497


>ref|XP_002282538.1| PREDICTED: FACT complex subunit SSRP1 [Vitis vinifera]
           gi|296082859|emb|CBI22160.3| unnamed protein product
           [Vitis vinifera]
          Length = 644

 Score =  272 bits (696), Expect = 4e-71
 Identities = 135/170 (79%), Positives = 142/170 (83%)
 Frame = +2

Query: 2   ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGILYPLEKSFFFLPKPPTLILHEEIDY 181
           ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG+LYPLEKSFFFLPKPPTLILHEEIDY
Sbjct: 327 ILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDGVLYPLEKSFFFLPKPPTLILHEEIDY 386

Query: 182 VEFERHAAGGSNMHYFDLLIRLKSEQEHLFRNIQRNEYHNLYGFISSKGLKIMNLGDSKP 361
           VEFERHAAGGSNMHYFDLLIRLK+EQEHLFRNIQRNEYHNL+ FIS KGLKIMNLGD + 
Sbjct: 387 VEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQRNEYHNLFDFISGKGLKIMNLGDVQT 446

Query: 362 TVGMAKVLENDDDDAVDPHLERIRNXXXXXXXXXXXXXXXXXXXXXGSPT 511
             G+A VL+NDDDDAVDPHLERI+N                     GSPT
Sbjct: 447 ADGVAAVLQNDDDDAVDPHLERIKNEAGGDESDEEDEDFVLDKDDGGSPT 496


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