BLASTX nr result

ID: Glycyrrhiza24_contig00011964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011964
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548563.1| PREDICTED: ABC transporter B family member 2...   322   5e-86
ref|XP_002272855.1| PREDICTED: ABC transporter B family member 2...   239   5e-61
ref|XP_002272060.1| PREDICTED: ABC transporter B family member 2...   230   3e-58
ref|XP_002521468.1| abc transporter, putative [Ricinus communis]...   224   2e-56
emb|CAN59888.1| hypothetical protein VITISV_026170 [Vitis vinifera]   223   4e-56

>ref|XP_003548563.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
           [Glycine max]
          Length = 674

 Score =  322 bits (826), Expect = 5e-86
 Identities = 175/250 (70%), Positives = 194/250 (77%), Gaps = 1/250 (0%)
 Frame = +1

Query: 58  HSNLGVSHIPKCHTFASNYNNNPQTRFLFSFAGSWRSKIYRVKTRCATECNKDDVSGFQK 237
           HS LG+S IP+ + F    +   QT    S   S RS+I+RV      E        F K
Sbjct: 10  HSTLGLSQIPRWNIFFPCNSTKSQTHHFSSLTHSGRSEIFRVS---GPETRSQVGFPFAK 66

Query: 238 VPGKRVGFVDS-SWWTLSENRDDCAEPAAAMLALRRMWELVADQRWVAFVAFGSLVAAAL 414
             G     + S SWW L E R+D AEP AAMLALRRMWELVAD+R VAFVA GSLV AAL
Sbjct: 67  RVGSSTSILPSGSWWALPELREDGAEPTAAMLALRRMWELVADERLVAFVAAGSLVIAAL 126

Query: 415 SEITMPSILAASIFSAQSGETMAFSKNAQFLVLLCFSSGICSGLRSGCFGILNVTLVKRL 594
           SEITMPSILAASIFSAQSGET+AFS+NA FL++LC +SGICSGLRSGCFGILNVTLVKRL
Sbjct: 127 SEITMPSILAASIFSAQSGETVAFSRNALFLLVLCLTSGICSGLRSGCFGILNVTLVKRL 186

Query: 595 RENLYTAILFQDISYFDKEKVGALTSRLSADCQRLSHVIGNDFQLVLRNTVQGTGAIINL 774
           RENLYTAILFQDISYFDKE+VG LTSRL+ADCQRLSHVIGND QL+LRN+ QGTGAIINL
Sbjct: 187 RENLYTAILFQDISYFDKERVGDLTSRLAADCQRLSHVIGNDLQLILRNSCQGTGAIINL 246

Query: 775 LALSWPLALS 804
           +ALSWPLALS
Sbjct: 247 MALSWPLALS 256


>ref|XP_002272855.1| PREDICTED: ABC transporter B family member 26, chloroplastic [Vitis
           vinifera] gi|296087608|emb|CBI34864.3| unnamed protein
           product [Vitis vinifera]
          Length = 658

 Score =  239 bits (610), Expect = 5e-61
 Identities = 118/178 (66%), Positives = 143/178 (80%)
 Frame = +1

Query: 271 SWWTLSENRDDCAEPAAAMLALRRMWELVADQRWVAFVAFGSLVAAALSEITMPSILAAS 450
           SWW LSE  ++ A+    M  LRR+W LV D+RWV FVA GSL  AALSEI+MP+++AAS
Sbjct: 63  SWWKLSEYEEE-AKAREVMPTLRRIWVLVEDERWVIFVAVGSLTLAALSEISMPNLIAAS 121

Query: 451 IFSAQSGETMAFSKNAQFLVLLCFSSGICSGLRSGCFGILNVTLVKRLRENLYTAILFQD 630
           +FSAQSGETM F +N+Q L+LLC  SGICSGLRSGCF I N+TLVKRLRE L +AILFQD
Sbjct: 122 VFSAQSGETMVFYRNSQLLILLCILSGICSGLRSGCFAIANITLVKRLRETLCSAILFQD 181

Query: 631 ISYFDKEKVGALTSRLSADCQRLSHVIGNDFQLVLRNTVQGTGAIINLLALSWPLALS 804
           I +F+ E VG LTSRL ADCQ+LS++IGND  ++LRN +QG GA+I+LL LSWPLALS
Sbjct: 182 IDFFETEAVGDLTSRLGADCQQLSNIIGNDINMILRNFLQGAGALIHLLTLSWPLALS 239


>ref|XP_002272060.1| PREDICTED: ABC transporter B family member 26, chloroplastic-like
           [Vitis vinifera]
          Length = 705

 Score =  230 bits (586), Expect = 3e-58
 Identities = 120/207 (57%), Positives = 149/207 (71%), Gaps = 7/207 (3%)
 Frame = +1

Query: 202 ECNKDDVSGFQKVPGKRVGFVDS-----SWWTLSENRDDC--AEPAAAMLALRRMWELVA 360
           E +++D   F K   + V F+ S     SWW+LS++ D    A+P   + AL+RMW LVA
Sbjct: 79  EGSENDQVEFPKRFRELVHFIRSIWPGGSWWSLSDHADFIMTAKPVTVLRALQRMWGLVA 138

Query: 361 DQRWVAFVAFGSLVAAALSEITMPSILAASIFSAQSGETMAFSKNAQFLVLLCFSSGICS 540
             RW+ F AF +LV AA+SEI++P  L ASIFSAQSGE + F +N   LV LCF+SGICS
Sbjct: 139 KDRWIIFAAFSALVLAAVSEISIPHFLTASIFSAQSGEIVVFHRNVGLLVFLCFASGICS 198

Query: 541 GLRSGCFGILNVTLVKRLRENLYTAILFQDISYFDKEKVGALTSRLSADCQRLSHVIGND 720
           GLR  CFGI N+ LVKR+RE LY+A+LFQDIS+FD E VG LTSRL ADCQ++S VIGND
Sbjct: 199 GLRGCCFGIANMILVKRMRETLYSALLFQDISFFDNETVGDLTSRLGADCQQVSRVIGND 258

Query: 721 FQLVLRNTVQGTGAIINLLALSWPLAL 801
             L+LRN +QGTGA+I LL LSWPL L
Sbjct: 259 LNLILRNVLQGTGALIYLLVLSWPLGL 285


>ref|XP_002521468.1| abc transporter, putative [Ricinus communis]
           gi|223539367|gb|EEF40958.1| abc transporter, putative
           [Ricinus communis]
          Length = 682

 Score =  224 bits (571), Expect = 2e-56
 Identities = 131/264 (49%), Positives = 172/264 (65%), Gaps = 18/264 (6%)
 Frame = +1

Query: 67  LGVSHIPKCHTFASNYNN---NPQTRFLFSFAGSWRSKIYRVKTRCATECNKDDVSGFQK 237
           + + H+    T  SN +    NP T  L +FA  ++SK     T     C +    GF K
Sbjct: 7   ISLYHLSTTCTIRSNTSLSIWNPITHRL-NFATEFQSKYQSPVT-----CRRIRYRGF-K 59

Query: 238 VP--------GKRVGFVDS--SWWTLSENRD-----DCAEPAAAMLALRRMWELVADQRW 372
            P         K + F+ +  +WW LS++++     +       + AL RM +L+ +++W
Sbjct: 60  FPHSALDTNNSKNLKFLQNFRNWWYLSDSKEVESSSNGKNSMTVLEALLRMLKLIGNEKW 119

Query: 373 VAFVAFGSLVAAALSEITMPSILAASIFSAQSGETMAFSKNAQFLVLLCFSSGICSGLRS 552
           + FVAFGSL+ AA+SEITMPSILA SIFSAQ+   MAFS+NAQ L  LC  SGI SGLRS
Sbjct: 120 IMFVAFGSLITAAISEITMPSILAESIFSAQNCHAMAFSRNAQLLGFLCLISGISSGLRS 179

Query: 553 GCFGILNVTLVKRLRENLYTAILFQDISYFDKEKVGALTSRLSADCQRLSHVIGNDFQLV 732
             F + N+ LVKRLRE LY+A++FQDI++FD E+VG LTSRL +DCQRLSHVIGND  L+
Sbjct: 180 VSFAVANIILVKRLRETLYSALIFQDINFFDSEEVGGLTSRLGSDCQRLSHVIGNDIHLI 239

Query: 733 LRNTVQGTGAIINLLALSWPLALS 804
           +RN +QGTGA+INLL LSWPLALS
Sbjct: 240 VRNVLQGTGAMINLLCLSWPLALS 263


>emb|CAN59888.1| hypothetical protein VITISV_026170 [Vitis vinifera]
          Length = 391

 Score =  223 bits (568), Expect = 4e-56
 Identities = 117/197 (59%), Positives = 142/197 (72%), Gaps = 19/197 (9%)
 Frame = +1

Query: 271 SWWTLSENRDDCAEPAAAMLALRRMWELVADQRWVAFVAFGSLVAAALSEITMPSILAAS 450
           S W LSE  ++ A+    M  LRR+W LV D+RWV FVA GSL  AALSEI+MP+++AAS
Sbjct: 63  SXWKLSEYEEE-AKAREVMPTLRRIWVLVEDERWVIFVAVGSLTLAALSEISMPNLIAAS 121

Query: 451 IFSAQSGETMAFSKNAQFLVLLCFSSGICSGLRSGCFGILNVTLVKRLRENLYTAILF-- 624
           +FSAQSGETM F +N+Q L+LLC  SGICSGLRSGCF I N+TLVKRLRE L +AILF  
Sbjct: 122 VFSAQSGETMVFYRNSQLLILLCILSGICSGLRSGCFAIANITLVKRLRETLCSAILFQV 181

Query: 625 -----------------QDISYFDKEKVGALTSRLSADCQRLSHVIGNDFQLVLRNTVQG 753
                            QDI +F+ E VG LTSRL ADCQ+LS++IGND  ++LRN +QG
Sbjct: 182 CVYLATIFVMLSTMHTPQDIDFFETEAVGDLTSRLGADCQQLSNIIGNDINMILRNFLQG 241

Query: 754 TGAIINLLALSWPLALS 804
            GA+I+LL LSWPLALS
Sbjct: 242 AGALIHLLTLSWPLALS 258


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