BLASTX nr result

ID: Glycyrrhiza24_contig00011959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011959
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]               115   5e-24
emb|CAN71958.1| hypothetical protein VITISV_011548 [Vitis vinifera]    94   1e-17
emb|CAN81563.1| hypothetical protein VITISV_019697 [Vitis vinifera]    94   2e-17
emb|CAN64902.1| hypothetical protein VITISV_037599 [Vitis vinifera]    93   3e-17
emb|CAN63006.1| hypothetical protein VITISV_038956 [Vitis vinifera]    93   4e-17

>gb|AAR13317.1| gag-pol polyprotein [Phaseolus vulgaris]
          Length = 1859

 Score =  115 bits (288), Expect = 5e-24
 Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 14/178 (7%)
 Frame = +1

Query: 31  HPFSDFIMSAPLPNGFRHLKIEQYDGSSDPEDHLAMFNVHTLLYGDTVIDPIKCRAFPST 210
           HPF+D I++ PLP+ +R L I  YDGS+DP++HL +F     LY  T    + C+ FP++
Sbjct: 210 HPFTDDIIATPLPDKWRGLTINLYDGSTDPDEHLNIFRTQMTLY--TTDRTVWCKVFPTS 267

Query: 211 LTSYALRWFFTLPPLSINTFSDLATKFLSRFVLSKTHRKDLMALTYFEKQRPDESLKDYI 390
           L    L WF  LPP SI +F  L  KF +++  S+ HR   M+L   +++R  ESL+ ++
Sbjct: 268 LREGPLGWFSDLPPNSIASFDALELKFTTQYATSRPHRTSSMSLLNVKQER-GESLRTFM 326

Query: 391 NRFNQEATQIHNLNPKLLMY--------------LIEVGQKTTGDFRRRATGYINVEE 522
           NRF++    I NLNP++ M+              LI+       + R RAT ++ +EE
Sbjct: 327 NRFSKVCMNIRNLNPEIAMHHLVSAILPGRFTESLIKRPPCNMDELRTRATKFMQIEE 384


>emb|CAN71958.1| hypothetical protein VITISV_011548 [Vitis vinifera]
          Length = 528

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
 Frame = +1

Query: 34  PFSDFIMSAPLPNGFRHLKIEQYDGSSDPEDHLAMFNVHTLLYGDTVIDPIKCRAFPSTL 213
           PF   I+    P GF   K   YDGSSDP DH+  +    L+  D   D + C+ FP++L
Sbjct: 5   PFCSHIIHYDSPRGFLVPKFSTYDGSSDPFDHIIHYR--QLMTLDIGNDALLCKVFPASL 62

Query: 214 TSYALRWFFTLPPLSINTFSDLATKFLSRFVLSKTHRKDLMALTYFEKQRPDESLKDYIN 393
              AL WF  LPP S++ F DL+  F+ +++ S  H++++  L    K + +ESL++++ 
Sbjct: 63  QGQALSWFHRLPPNSVDNFRDLSEAFVGQYLCSARHKQNISTLQNI-KMQENESLREFVK 121

Query: 394 RFNQEATQI--HNLNPKLLMYLIEVGQKTTGDFRRRATGYINVEE 522
           RF Q   Q+  +N++ K L         T  D  RRA+ Y  +E+
Sbjct: 122 RFGQAVLQVEAYNMDVKPL--------TTMDDLFRRASKYSMLED 158


>emb|CAN81563.1| hypothetical protein VITISV_019697 [Vitis vinifera]
          Length = 522

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/129 (37%), Positives = 73/129 (56%)
 Frame = +1

Query: 34  PFSDFIMSAPLPNGFRHLKIEQYDGSSDPEDHLAMFNVHTLLYGDTVIDPIKCRAFPSTL 213
           PF   I+   LP GF   K   YDGSSDP DH+  +    L+  D   D + C+ FP++L
Sbjct: 5   PFCSHIIHYKLPRGFLVPKFSTYDGSSDPFDHIMHYR--QLMTLDIGNDELLCKVFPASL 62

Query: 214 TSYALRWFFTLPPLSINTFSDLATKFLSRFVLSKTHRKDLMALTYFEKQRPDESLKDYIN 393
              AL WF  LPP SI+ F DL+  F+ +++ S  H++++  L    K R +ESL++++ 
Sbjct: 63  QGQALLWFHRLPPNSIDNFRDLSEAFVGQYLCSARHKQNISTLQNI-KMRDNESLREFVK 121

Query: 394 RFNQEATQI 420
           RF Q   Q+
Sbjct: 122 RFGQAVLQV 130


>emb|CAN64902.1| hypothetical protein VITISV_037599 [Vitis vinifera]
          Length = 478

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 49/138 (35%), Positives = 77/138 (55%)
 Frame = +1

Query: 34  PFSDFIMSAPLPNGFRHLKIEQYDGSSDPEDHLAMFNVHTLLYGDTVIDPIKCRAFPSTL 213
           PF   I++   P GF   K   YDG++DP DH+  +    L+  D   D + C+ FP++L
Sbjct: 5   PFCSHIINYEPPRGFLVPKFSTYDGTNDPFDHIMHYR--QLMTLDIGNDALLCKVFPASL 62

Query: 214 TSYALRWFFTLPPLSINTFSDLATKFLSRFVLSKTHRKDLMALTYFEKQRPDESLKDYIN 393
              AL WF  LPP S+ +F DL+  F+ +++ S  H++++  L    K R +ESL++++ 
Sbjct: 63  QGQALSWFHCLPPNSVGSFKDLSEAFVGQYLCSARHKQNISTLQNI-KMRDNESLREFVK 121

Query: 394 RFNQEATQIHNLNPKLLM 447
           RF Q A    N  PK L+
Sbjct: 122 RFGQAALHFSNHWPKNLL 139


>emb|CAN63006.1| hypothetical protein VITISV_038956 [Vitis vinifera]
          Length = 527

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 55/163 (33%), Positives = 83/163 (50%)
 Frame = +1

Query: 34  PFSDFIMSAPLPNGFRHLKIEQYDGSSDPEDHLAMFNVHTLLYGDTVIDPIKCRAFPSTL 213
           PF   I     P GF   K   YDG++DP DH+  +    L+  D   D + C+ FP++L
Sbjct: 5   PFCSHITHYEPPRGFLVPKFSTYDGTNDPFDHIMHYR--QLMTLDIGNDALLCKVFPASL 62

Query: 214 TSYALRWFFTLPPLSINTFSDLATKFLSRFVLSKTHRKDLMALTYFEKQRPDESLKDYIN 393
              AL WF  LPP SI+ F DL+  F+ +++ S  HR+++  L    K R +ESL++++ 
Sbjct: 63  QGQALSWFHRLPPNSIDNFRDLSEAFVGQYLCSARHRQNISTLQNI-KMRDNESLREFVK 121

Query: 394 RFNQEATQIHNLNPKLLMYLIEVGQKTTGDFRRRATGYINVEE 522
           RF Q   QI   +       ++    T  D  RRA  Y  +E+
Sbjct: 122 RFGQAVLQIEACS-------MDAPPTTMDDLFRRANKYSMLED 157


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