BLASTX nr result

ID: Glycyrrhiza24_contig00011933 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011933
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893178.1| hypothetical protein ARALYDRAFT_472396 [Arab...   118   2e-24
ref|NP_564144.1| plastid transcriptionally active 6 [Arabidopsis...   116   8e-24
ref|XP_002284617.1| PREDICTED: uncharacterized protein LOC100250...   115   1e-23
ref|XP_002520309.1| conserved hypothetical protein [Ricinus comm...   115   1e-23
emb|CBI18966.3| unnamed protein product [Vitis vinifera]              114   2e-23

>ref|XP_002893178.1| hypothetical protein ARALYDRAFT_472396 [Arabidopsis lyrata subsp.
           lyrata] gi|297339020|gb|EFH69437.1| hypothetical protein
           ARALYDRAFT_472396 [Arabidopsis lyrata subsp. lyrata]
          Length = 328

 Score =  118 bits (295), Expect = 2e-24
 Identities = 53/58 (91%), Positives = 55/58 (94%)
 Frame = +2

Query: 713 AAVQSKSFVSTQGWDPETVVDYRINEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMY 886
           A VQSKSF+STQGWD E VVDYRINEDEFHKISL+DCDFFIRKPPDPDNDVYDFREMY
Sbjct: 107 AFVQSKSFISTQGWDSEMVVDYRINEDEFHKISLMDCDFFIRKPPDPDNDVYDFREMY 164


>ref|NP_564144.1| plastid transcriptionally active 6 [Arabidopsis thaliana]
           gi|79318316|ref|NP_001031076.1| plastid
           transcriptionally active 6 [Arabidopsis thaliana]
           gi|5263310|gb|AAD41412.1|AC007727_1 EST gb|N95925 comes
           from this gene [Arabidopsis thaliana]
           gi|11692926|gb|AAG40066.1|AF324715_1 At1g21600
           [Arabidopsis thaliana]
           gi|11908094|gb|AAG41476.1|AF326894_1 unknown protein
           [Arabidopsis thaliana]
           gi|17386146|gb|AAL38619.1|AF446886_1 At1g21600/F24J8.10
           [Arabidopsis thaliana] gi|15450597|gb|AAK96570.1|
           At1g21600/F24J8.10 [Arabidopsis thaliana]
           gi|21280837|gb|AAM44921.1| unknown protein [Arabidopsis
           thaliana] gi|222423451|dbj|BAH19696.1| AT1G21600
           [Arabidopsis thaliana] gi|332192001|gb|AEE30122.1|
           plastid transcriptionally active 6 [Arabidopsis
           thaliana] gi|332192002|gb|AEE30123.1| plastid
           transcriptionally active 6 [Arabidopsis thaliana]
          Length = 328

 Score =  116 bits (290), Expect = 8e-24
 Identities = 51/58 (87%), Positives = 55/58 (94%)
 Frame = +2

Query: 713 AAVQSKSFVSTQGWDPETVVDYRINEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMY 886
           A VQSKSF+STQGWD + VVDYRINEDEFHK+SL+DCDFFIRKPPDPDNDVYDFREMY
Sbjct: 107 AFVQSKSFISTQGWDSDMVVDYRINEDEFHKLSLMDCDFFIRKPPDPDNDVYDFREMY 164


>ref|XP_002284617.1| PREDICTED: uncharacterized protein LOC100250482 [Vitis vinifera]
          Length = 333

 Score =  115 bits (289), Expect = 1e-23
 Identities = 53/58 (91%), Positives = 53/58 (91%)
 Frame = +2

Query: 713 AAVQSKSFVSTQGWDPETVVDYRINEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMY 886
           A VQSKSFVS QGWD E VVDYRINEDEFHKISL DCDFFIRKPPDPDNDVYDFREMY
Sbjct: 112 AMVQSKSFVSIQGWDSEMVVDYRINEDEFHKISLFDCDFFIRKPPDPDNDVYDFREMY 169


>ref|XP_002520309.1| conserved hypothetical protein [Ricinus communis]
           gi|223540528|gb|EEF42095.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 327

 Score =  115 bits (288), Expect = 1e-23
 Identities = 52/58 (89%), Positives = 54/58 (93%)
 Frame = +2

Query: 713 AAVQSKSFVSTQGWDPETVVDYRINEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMY 886
           A V SKSFVSTQGWD E +VDYRI+EDEFHKISLLDCDFFIRKPPDPDNDVYDFREMY
Sbjct: 106 AMVDSKSFVSTQGWDSEKIVDYRIDEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMY 163


>emb|CBI18966.3| unnamed protein product [Vitis vinifera]
          Length = 221

 Score =  114 bits (286), Expect = 2e-23
 Identities = 52/56 (92%), Positives = 52/56 (92%)
 Frame = +2

Query: 719 VQSKSFVSTQGWDPETVVDYRINEDEFHKISLLDCDFFIRKPPDPDNDVYDFREMY 886
           VQSKSFVS QGWD E VVDYRINEDEFHKISL DCDFFIRKPPDPDNDVYDFREMY
Sbjct: 2   VQSKSFVSIQGWDSEMVVDYRINEDEFHKISLFDCDFFIRKPPDPDNDVYDFREMY 57


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