BLASTX nr result

ID: Glycyrrhiza24_contig00011919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011919
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546298.1| PREDICTED: polygalacturonase At1g48100-like ...   306   1e-81
ref|XP_003546297.1| PREDICTED: polygalacturonase At1g48100-like ...   306   1e-81
ref|XP_003534803.1| PREDICTED: polygalacturonase At1g48100-like ...   306   1e-81
ref|XP_003594633.1| Polygalacturonase [Medicago truncatula] gi|3...   304   6e-81
ref|XP_002263668.1| PREDICTED: polygalacturonase At1g48100-like ...   275   4e-72

>ref|XP_003546298.1| PREDICTED: polygalacturonase At1g48100-like isoform 2 [Glycine max]
          Length = 483

 Score =  306 bits (784), Expect = 1e-81
 Identities = 147/157 (93%), Positives = 154/157 (98%)
 Frame = +1

Query: 1   RFFMSSNLVLSGVKIQNSPQFHVKFDGCQGVLIDKLSISAPKLSPNTDGIHLGNTKGVGI 180
           RFFMSSNLVLSGVKIQNSP FHVKFDGCQGVLIDKLSIS+PKLSPNTDGIHLGNT+GVGI
Sbjct: 221 RFFMSSNLVLSGVKIQNSPMFHVKFDGCQGVLIDKLSISSPKLSPNTDGIHLGNTRGVGI 280

Query: 181 YNSVISNGDDCISIGPGCSDVNVEGVTCAPTHGISIGSLGVHNSHACVSNLTVRDSIIKE 360
           YNS+ISNGDDCISIGPGCSDV++EGVTCAPTHGISIGSLGVHNS ACVSNLTVR++IIKE
Sbjct: 281 YNSMISNGDDCISIGPGCSDVDIEGVTCAPTHGISIGSLGVHNSQACVSNLTVRNTIIKE 340

Query: 361 SDNGLRIKTWQGGTGSVTGLTFENIQMENVRNCIIID 471
           SDNGLRIKTWQGGTGSVTGL FENIQMENVRNCIIID
Sbjct: 341 SDNGLRIKTWQGGTGSVTGLRFENIQMENVRNCIIID 377


>ref|XP_003546297.1| PREDICTED: polygalacturonase At1g48100-like isoform 1 [Glycine max]
          Length = 479

 Score =  306 bits (784), Expect = 1e-81
 Identities = 147/157 (93%), Positives = 154/157 (98%)
 Frame = +1

Query: 1   RFFMSSNLVLSGVKIQNSPQFHVKFDGCQGVLIDKLSISAPKLSPNTDGIHLGNTKGVGI 180
           RFFMSSNLVLSGVKIQNSP FHVKFDGCQGVLIDKLSIS+PKLSPNTDGIHLGNT+GVGI
Sbjct: 217 RFFMSSNLVLSGVKIQNSPMFHVKFDGCQGVLIDKLSISSPKLSPNTDGIHLGNTRGVGI 276

Query: 181 YNSVISNGDDCISIGPGCSDVNVEGVTCAPTHGISIGSLGVHNSHACVSNLTVRDSIIKE 360
           YNS+ISNGDDCISIGPGCSDV++EGVTCAPTHGISIGSLGVHNS ACVSNLTVR++IIKE
Sbjct: 277 YNSMISNGDDCISIGPGCSDVDIEGVTCAPTHGISIGSLGVHNSQACVSNLTVRNTIIKE 336

Query: 361 SDNGLRIKTWQGGTGSVTGLTFENIQMENVRNCIIID 471
           SDNGLRIKTWQGGTGSVTGL FENIQMENVRNCIIID
Sbjct: 337 SDNGLRIKTWQGGTGSVTGLRFENIQMENVRNCIIID 373


>ref|XP_003534803.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
          Length = 474

 Score =  306 bits (784), Expect = 1e-81
 Identities = 147/157 (93%), Positives = 154/157 (98%)
 Frame = +1

Query: 1   RFFMSSNLVLSGVKIQNSPQFHVKFDGCQGVLIDKLSISAPKLSPNTDGIHLGNTKGVGI 180
           RFFMSSNLVLSGVKIQNSP FHVKFDGCQGVLIDKLSIS+PKLSPNTDGIHLGNT+GVGI
Sbjct: 212 RFFMSSNLVLSGVKIQNSPMFHVKFDGCQGVLIDKLSISSPKLSPNTDGIHLGNTRGVGI 271

Query: 181 YNSVISNGDDCISIGPGCSDVNVEGVTCAPTHGISIGSLGVHNSHACVSNLTVRDSIIKE 360
           YNS+ISNGDDCISIGPGCSDV++EGVTCAPTHGISIGSLGVHNS ACVSNLTVR++IIKE
Sbjct: 272 YNSMISNGDDCISIGPGCSDVDIEGVTCAPTHGISIGSLGVHNSQACVSNLTVRNTIIKE 331

Query: 361 SDNGLRIKTWQGGTGSVTGLTFENIQMENVRNCIIID 471
           SDNGLRIKTWQGGTGSVTGL FENIQMENVRNCIIID
Sbjct: 332 SDNGLRIKTWQGGTGSVTGLRFENIQMENVRNCIIID 368


>ref|XP_003594633.1| Polygalacturonase [Medicago truncatula] gi|355483681|gb|AES64884.1|
           Polygalacturonase [Medicago truncatula]
          Length = 463

 Score =  304 bits (778), Expect = 6e-81
 Identities = 146/157 (92%), Positives = 154/157 (98%)
 Frame = +1

Query: 1   RFFMSSNLVLSGVKIQNSPQFHVKFDGCQGVLIDKLSISAPKLSPNTDGIHLGNTKGVGI 180
           RFFMSSNLVL G+KIQNSPQFHVKFDGCQGVLID+LSISAPKLSPNTDGIHLGNT+ VGI
Sbjct: 201 RFFMSSNLVLRGLKIQNSPQFHVKFDGCQGVLIDELSISAPKLSPNTDGIHLGNTRDVGI 260

Query: 181 YNSVISNGDDCISIGPGCSDVNVEGVTCAPTHGISIGSLGVHNSHACVSNLTVRDSIIKE 360
           YNS+ISNGDDCISIGPGCS+VNV+GVTCAPTHGISIGSLGVHNSHACVSNLTVR+SIIKE
Sbjct: 261 YNSLISNGDDCISIGPGCSNVNVDGVTCAPTHGISIGSLGVHNSHACVSNLTVRNSIIKE 320

Query: 361 SDNGLRIKTWQGGTGSVTGLTFENIQMENVRNCIIID 471
           SDNGLRIKTWQGGTGSVTGLTF+NIQMENVRNCI ID
Sbjct: 321 SDNGLRIKTWQGGTGSVTGLTFDNIQMENVRNCINID 357


>ref|XP_002263668.1| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
          Length = 477

 Score =  275 bits (702), Expect = 4e-72
 Identities = 128/157 (81%), Positives = 146/157 (92%)
 Frame = +1

Query: 1   RFFMSSNLVLSGVKIQNSPQFHVKFDGCQGVLIDKLSISAPKLSPNTDGIHLGNTKGVGI 180
           RFFMSSNLV+S ++IQNSPQFH+KFDGC+GVLI+KLSIS+PKLSPNTDGIH+ NTK VGI
Sbjct: 217 RFFMSSNLVVSSLRIQNSPQFHMKFDGCEGVLIEKLSISSPKLSPNTDGIHIENTKSVGI 276

Query: 181 YNSVISNGDDCISIGPGCSDVNVEGVTCAPTHGISIGSLGVHNSHACVSNLTVRDSIIKE 360
           YNS I NGDDCISIG GCSDVN+EGVTC P+HGISIGSLGV NS ACVSN+TVR+  IK+
Sbjct: 277 YNSEIGNGDDCISIGRGCSDVNIEGVTCGPSHGISIGSLGVQNSQACVSNITVRNVFIKD 336

Query: 361 SDNGLRIKTWQGGTGSVTGLTFENIQMENVRNCIIID 471
           SDNG+RIKTWQGGTGSV+G++FENIQMENVRNC+IID
Sbjct: 337 SDNGVRIKTWQGGTGSVSGISFENIQMENVRNCMIID 373


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