BLASTX nr result

ID: Glycyrrhiza24_contig00011893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011893
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003546855.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...   118   4e-25
ref|XP_003532889.1| PREDICTED: E3 ubiquitin-protein ligase RNF18...   117   1e-24
ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    91   1e-16
ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cuc...    85   7e-15
ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219...    85   7e-15

>ref|XP_003546855.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
          Length = 233

 Score =  118 bits (296), Expect = 4e-25
 Identities = 58/97 (59%), Positives = 69/97 (71%), Gaps = 3/97 (3%)
 Frame = +1

Query: 1   EPPLFDVVFQDALALLSXXXXXXXHKTRAA---IPAIPVTHALLSRLDPNGVVFCAVCKD 171
           E  LFDVVFQDAL LL+           +    +P++ VT +LLS LDPNGVV CAVCKD
Sbjct: 55  ESSLFDVVFQDALLLLNPNPNPNPKPLPSKPLPLPSLHVTPSLLSSLDPNGVVLCAVCKD 114

Query: 172 PIAVDAEAKLLPCDHLYHSDCITPWLLLRNSCPLCRF 282
            I ++A+AK LPC HLYHSDCITPW+ L +SCPLCRF
Sbjct: 115 QITLNAQAKQLPCQHLYHSDCITPWIELNSSCPLCRF 151


>ref|XP_003532889.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max]
          Length = 207

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/94 (65%), Positives = 67/94 (71%)
 Frame = +1

Query: 1   EPPLFDVVFQDALALLSXXXXXXXHKTRAAIPAIPVTHALLSRLDPNGVVFCAVCKDPIA 180
           E  LFDVVFQDAL LL+        K R  +P++ VT +LLS LDPNGVV CAVCKD I 
Sbjct: 49  ESSLFDVVFQDALLLLNPPSS----KPRP-LPSLHVTPSLLSSLDPNGVVRCAVCKDQIT 103

Query: 181 VDAEAKLLPCDHLYHSDCITPWLLLRNSCPLCRF 282
             AEAK LPC HLYHSDCITPWL L  SCPLCRF
Sbjct: 104 PHAEAKQLPCKHLYHSDCITPWLELHASCPLCRF 137


>ref|XP_002271062.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
          Length = 312

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 39/68 (57%), Positives = 49/68 (72%)
 Frame = +1

Query: 79  TRAAIPAIPVTHALLSRLDPNGVVFCAVCKDPIAVDAEAKLLPCDHLYHSDCITPWLLLR 258
           +RA++ A+P      S L  + ++FCAVCKD   VD EAK LPC+H+YHSDCI PWL  +
Sbjct: 124 SRASLEALPTFKITPSFLQLDPILFCAVCKDQFVVDVEAKRLPCNHIYHSDCILPWLSQQ 183

Query: 259 NSCPLCRF 282
           NSCPLCRF
Sbjct: 184 NSCPLCRF 191


>ref|XP_004158213.1| PREDICTED: uncharacterized LOC101219937 [Cucumis sativus]
          Length = 333

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/65 (60%), Positives = 45/65 (69%)
 Frame = +1

Query: 88  AIPAIPVTHALLSRLDPNGVVFCAVCKDPIAVDAEAKLLPCDHLYHSDCITPWLLLRNSC 267
           AIP I VT ALL   D + V+ CA+CKD   ++ EAK LPC HLYH DCI PWL   +SC
Sbjct: 143 AIPTIKVTSALL---DEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSC 199

Query: 268 PLCRF 282
           PLCRF
Sbjct: 200 PLCRF 204


>ref|XP_004135900.1| PREDICTED: uncharacterized protein LOC101219937 [Cucumis sativus]
          Length = 334

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 39/65 (60%), Positives = 45/65 (69%)
 Frame = +1

Query: 88  AIPAIPVTHALLSRLDPNGVVFCAVCKDPIAVDAEAKLLPCDHLYHSDCITPWLLLRNSC 267
           AIP I VT ALL   D + V+ CA+CKD   ++ EAK LPC HLYH DCI PWL   +SC
Sbjct: 144 AIPTIKVTSALL---DEDPVLICAICKDQFLLEVEAKQLPCSHLYHPDCILPWLSNHDSC 200

Query: 268 PLCRF 282
           PLCRF
Sbjct: 201 PLCRF 205


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