BLASTX nr result

ID: Glycyrrhiza24_contig00011860 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011860
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589543.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   150   1e-34
ref|XP_003637764.1| F-box family-4 [Medicago truncatula] gi|3555...   133   2e-29
ref|XP_003610666.1| F-box/LRR-repeat protein [Medicago truncatul...   101   7e-20
gb|ABD28299.1| Cyclin-like F-box [Medicago truncatula]                 95   8e-18
ref|XP_003598640.1| FBD-associated F-box protein [Medicago trunc...    95   8e-18

>ref|XP_003589543.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478591|gb|AES59794.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 523

 Score =  150 bits (379), Expect = 1e-34
 Identities = 82/178 (46%), Positives = 115/178 (64%), Gaps = 4/178 (2%)
 Frame = -3

Query: 526 MESISLFIEDEYDVSLVNTWLSSIFHRSAKHLEIYLHGEKIPFSQLSSHSLFNSISLEEL 347
           +E  SL I ++ D+SL NTW+SSI +R  K L I+    ++PFS L+SH LFN  SLEEL
Sbjct: 162 LERFSLLINNKRDISLQNTWISSILNRRVKILRIHSSFYQLPFSALTSHYLFNCTSLEEL 221

Query: 346 -LLMTYGSEIKIPTTHVYFGYLKSLTFSGIDFTVDSSDDHLSLNLRVLKMFKTVNCTWIN 170
            L++   S IK P+  V+FG+LK L   GI F +D+S D L+LNL +L+ F   NC W  
Sbjct: 222 ELVLHVSSTIKFPSISVHFGHLKLLKLYGIFFKIDTSSDCLTLNLPLLRKFDIKNCNWSG 281

Query: 169 AKGITVEAPLLETICIEQNLD---SASDEPRSSAITFSVLHLKELTYYGYDISRTVIL 5
            K + VEAPLLE + IEQ+++   +AS +  S +I F+ LHLK+ TY GY  ++ + L
Sbjct: 282 GKDLIVEAPLLEIVSIEQDIEFYNAASHDLHSQSIKFNALHLKQFTYSGYGTAQLIHL 339


>ref|XP_003637764.1| F-box family-4 [Medicago truncatula] gi|355503699|gb|AES84902.1|
           F-box family-4 [Medicago truncatula]
          Length = 476

 Score =  133 bits (334), Expect = 2e-29
 Identities = 78/185 (42%), Positives = 112/185 (60%), Gaps = 4/185 (2%)
 Frame = -3

Query: 547 LLTKGAGMESISLFIEDEYDVSLVNTWLSSIFHRSAKHLEIYLHGEKIPFSQLSSHSLFN 368
           L+    G+E+ S  I ++  VSL NTW+SSIF    K+L I+ +  K+PFS  +S  LF+
Sbjct: 132 LIFSTIGLENFSFVIYNKRCVSLQNTWISSIF----KNLRIHSYFYKLPFSPSTSDDLFS 187

Query: 367 SISLEEL-LLMTYGSEIKIPTTHVYFGYLKSLTFSGIDFTVDSSDDHLSLNLRVLKMFKT 191
           S SL+EL L +   S IK+PTT ++F  LK L   G+ F +D S D ++LNL ++K F+ 
Sbjct: 188 SCSLQELELRLKVYSTIKVPTTSLHFQQLKFLNLYGVFFDIDPSSDSMNLNLPLVKKFEI 247

Query: 190 VNCTWINAKGITVEAPLLETICIEQNLD---SASDEPRSSAITFSVLHLKELTYYGYDIS 20
            NC W   K + V+APLLETI I Q  D     + +P + +I F+ LH+KE  Y GY +S
Sbjct: 248 SNCHWSKYKDVFVQAPLLETISIGQEADFFMVKTHDPCAQSIKFNALHVKEFNYCGYGLS 307

Query: 19  RTVIL 5
             + L
Sbjct: 308 HKIHL 312


>ref|XP_003610666.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355512001|gb|AES93624.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 494

 Score =  101 bits (252), Expect = 7e-20
 Identities = 72/207 (34%), Positives = 111/207 (53%), Gaps = 26/207 (12%)
 Frame = -3

Query: 547 LLTKGAGMESISLFIEDEYDVSLVNTWLSSIFHRSAKHLEIYLHGEKIPFSQLSSHSLFN 368
           LL     M+ +SLF+   Y+ SL+++WLS+IF R  K L+I+   + IPFS L+SHSLFN
Sbjct: 104 LLNDSLAMDHVSLFLFTLYNWSLLDSWLSNIFKRRVKILQIHSFFQ-IPFSVLASHSLFN 162

Query: 367 S-ISLEELLLMT----------YGSEIKI------------PTTHVYFGYLKSLTFSGID 257
           + + LEEL L+T          Y  E+K+            P+ ++ F  LK L   GI+
Sbjct: 163 NFLLLEELELLTDSISFINVPMYDEELKLLRNSFNSVDVPAPSKYIVFRNLKILNLCGIN 222

Query: 256 FTVDS--SDDHLSLNLRVLKMFKTVNCTW-INAKGITVEAPLLETICIEQNLDSASDEPR 86
           F  DS  S  ++ L   +L  F+  NC W ++   + + APLLE+I IE ++       +
Sbjct: 223 FNTDSPKSWRNVHLEFPLLTKFEAKNCAWFVDTSLVMIYAPLLESISIEHSVGVPCKRDK 282

Query: 85  SSAITFSVLHLKELTYYGYDISRTVIL 5
           S         LKE ++ G+DIS+ +I+
Sbjct: 283 SFICFPDSEDLKEFSFCGFDISQNIII 309


>gb|ABD28299.1| Cyclin-like F-box [Medicago truncatula]
          Length = 437

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 7/180 (3%)
 Frame = -3

Query: 523 ESISLFIEDEYDVSLVNTWLS-SIFHRSAKHLEIYLHGEKIPFSQLSSHSLFN-SISLEE 350
           E+ISL +  +YD+SL++ W    +   + K+L I+ H  K+PFS  +S+SLF  ++ LE+
Sbjct: 92  ETISLSLSGQYDLSLLDAWFGIMLLDGTLKNLRIHSHF-KLPFSTFASNSLFKITLLLEK 150

Query: 349 LLLMTYG-SEIKIPTT-HVYFGYLKSLTFSGIDFTVDS--SDDHLSLNLRVLKMFKTVNC 182
           L L     S IK+P+   ++FG LK L    I F  DS  S DH+ L    L  F+ +NC
Sbjct: 151 LELHPESISRIKVPSKPDIHFGNLKHLKLYQIKFKTDSTISPDHIDLRFPHLTKFEAINC 210

Query: 181 TW-INAKGITVEAPLLETICIEQNLDSASDEPRSSAITFSVLHLKELTYYGYDISRTVIL 5
           +W ++++ + V APLL++I I+        E  S+    S LHL+  T+ GY I + +I+
Sbjct: 211 SWFLDSRAVYVHAPLLQSINIKNGTCLLYGEDNSAINFVSSLHLQGFTFAGYCIPQGIII 270


>ref|XP_003598640.1| FBD-associated F-box protein [Medicago truncatula]
           gi|355487688|gb|AES68891.1| FBD-associated F-box protein
           [Medicago truncatula]
          Length = 450

 Score = 94.7 bits (234), Expect = 8e-18
 Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 7/180 (3%)
 Frame = -3

Query: 523 ESISLFIEDEYDVSLVNTWLS-SIFHRSAKHLEIYLHGEKIPFSQLSSHSLFN-SISLEE 350
           E+ISL +  +YD+SL++ W    +   + K+L I+ H  K+PFS  +S+SLF  ++ LE+
Sbjct: 92  ETISLSLSGQYDLSLLDAWFGIMLLDGTLKNLRIHSHF-KLPFSTFASNSLFKITLLLEK 150

Query: 349 LLLMTYG-SEIKIPTT-HVYFGYLKSLTFSGIDFTVDS--SDDHLSLNLRVLKMFKTVNC 182
           L L     S IK+P+   ++FG LK L    I F  DS  S DH+ L    L  F+ +NC
Sbjct: 151 LELHPESISRIKVPSKPDIHFGNLKHLKLYQIKFKTDSTISPDHIDLRFPHLTKFEAINC 210

Query: 181 TW-INAKGITVEAPLLETICIEQNLDSASDEPRSSAITFSVLHLKELTYYGYDISRTVIL 5
           +W ++++ + V APLL++I I+        E  S+    S LHL+  T+ GY I + +I+
Sbjct: 211 SWFLDSRAVYVHAPLLQSINIKNGTCLLYGEDNSAINFVSSLHLQGFTFAGYCIPQGIII 270


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