BLASTX nr result

ID: Glycyrrhiza24_contig00011837 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011837
         (1347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ83971.1| unknown [Medicago truncatula] gi|388497556|gb|AFK...   310   5e-82
ref|NP_001237884.1| RING-H2 finger protein [Glycine max] gi|2259...   293   9e-77
gb|ACU17036.1| unknown [Glycine max]                                  183   8e-44
ref|XP_002313898.1| predicted protein [Populus trichocarpa] gi|2...   137   6e-30
ref|XP_002886587.1| hypothetical protein ARALYDRAFT_475251 [Arab...   130   1e-27

>gb|ACJ83971.1| unknown [Medicago truncatula] gi|388497556|gb|AFK36844.1| unknown
           [Medicago truncatula]
          Length = 251

 Score =  310 bits (794), Expect = 5e-82
 Identities = 160/251 (63%), Positives = 175/251 (69%), Gaps = 1/251 (0%)
 Frame = +1

Query: 190 MTSASELFHIRRHRLGRNALDLEFHSSPAPDIXXXXXXXXXXXXXXXXXXXXXXXXXX-H 366
           MTSASELFHIRRHRLGRN +D  FHSSP+ D                            H
Sbjct: 1   MTSASELFHIRRHRLGRNDIDSSFHSSPSSDFHHHHRLHDSDDDDSPRIRRHYNVRRLRH 60

Query: 367 TERASDRFDGRYRRSHSSDGVDSAENVRGTLRASASEXXXXXXXXXXXXXXXXXXXEPVA 546
            ER S+RFDGRYRRS  ++GV+S E+VRG  RAS SE                   +PV 
Sbjct: 61  HERVSERFDGRYRRSLVNEGVESGESVRGAPRASGSERLPVDVRLARERLLQRLRGDPVD 120

Query: 547 RNRQYGRDSMDEDQESELSSEFPTGDALVTDLTSQMERSQFLQELNEKPPGLTQEALNCL 726
           RNRQ  RDS+DEDQESELSSE PT D+L+TDLTSQM R Q L E   KPPGLTQEALNCL
Sbjct: 121 RNRQNDRDSVDEDQESELSSEVPTEDSLITDLTSQMARFQLLHEQTRKPPGLTQEALNCL 180

Query: 727 HVEVFSSIETGLESRVLQDCGICLESFTDGDELIHLPCGHKFHSACLDPWIRSCGDCPYC 906
           H+EVFSSI+T  ES+VLQDCGICLESF DGD+LIHL CGHKFHSA LDPWIRSCGDCPYC
Sbjct: 181 HLEVFSSIDTESESKVLQDCGICLESFMDGDKLIHLQCGHKFHSAGLDPWIRSCGDCPYC 240

Query: 907 RRCIVVNSHLP 939
           RRCIVVNSHLP
Sbjct: 241 RRCIVVNSHLP 251


>ref|NP_001237884.1| RING-H2 finger protein [Glycine max] gi|22597166|gb|AAN03470.1|
           RING-H2 finger protein [Glycine max]
          Length = 246

 Score =  293 bits (749), Expect = 9e-77
 Identities = 156/254 (61%), Positives = 172/254 (67%), Gaps = 6/254 (2%)
 Frame = +1

Query: 190 MTSASELFHIRRHRLGRNALDL----EFHSSPAPDIXXXXXXXXXXXXXXXXXXXXXXXX 357
           MTSASELFH RRHRLGRNALDL    E H++ +                           
Sbjct: 1   MTSASELFHTRRHRLGRNALDLGLDTELHAADS---------------LRQLRLRHYYLR 45

Query: 358 XXHTERASDRFDGRYRRSHSSDGVDSAENVRGTLRASASEXXXXXXXXXXXXXXXXXXXE 537
             H ERASDR DGRYRRS  S+ VDS ENVR +LR S+SE                   E
Sbjct: 46  RHHPERASDRIDGRYRRSFVSESVDSEENVRSSLRGSSSERLPVGVVLARARLLQRLRGE 105

Query: 538 PVARNRQYGRDSMDEDQESELSSEFPTGDALVTDLTSQMERSQFLQELNEKPPGLTQEAL 717
           P++ NRQY RDS  ED ESE S+E P+G +LVT+LTSQM RSQFLQEL+ KPPGLTQEAL
Sbjct: 106 PLSTNRQYDRDSFGEDPESESSNEDPSGASLVTELTSQMARSQFLQELSTKPPGLTQEAL 165

Query: 718 NCLHVEVFSS--IETGLESRVLQDCGICLESFTDGDELIHLPCGHKFHSACLDPWIRSCG 891
           +CLH EVFSS   E GL+SRVLQDC ICLESFTDGDELI LPCGHKFHS CLDPWIR CG
Sbjct: 166 DCLHQEVFSSNASEIGLDSRVLQDCSICLESFTDGDELIRLPCGHKFHSVCLDPWIRCCG 225

Query: 892 DCPYCRRCIVVNSH 933
           DCPYCRRCIVVN+H
Sbjct: 226 DCPYCRRCIVVNTH 239


>gb|ACU17036.1| unknown [Glycine max]
          Length = 202

 Score =  183 bits (465), Expect = 8e-44
 Identities = 110/203 (54%), Positives = 125/203 (61%), Gaps = 6/203 (2%)
 Frame = +1

Query: 190 MTSASELFHIRRHRLGRNALDL----EFHSSPAPDIXXXXXXXXXXXXXXXXXXXXXXXX 357
           MTSASELFH RRHRLGRNALDL    E H++ +                           
Sbjct: 1   MTSASELFHTRRHRLGRNALDLGLDTELHAADS---------------LRQLRLRHYYLR 45

Query: 358 XXHTERASDRFDGRYRRSHSSDGVDSAENVRGTLRASASEXXXXXXXXXXXXXXXXXXXE 537
             H ERASDR DGRYRRS  S+ VDS ENVR +LR S+SE                   E
Sbjct: 46  RHHPERASDRIDGRYRRSFVSESVDSEENVRSSLRGSSSERLPVGVVLARARLLQRLRGE 105

Query: 538 PVARNRQYGRDSMDEDQESELSSEFPTGDALVTDLTSQMERSQFLQELNEKPPGLTQEAL 717
           P++ NRQY RDS  ED ESE S+E P+G +LVT+LTSQM RSQFLQEL+ KPPGLTQEAL
Sbjct: 106 PLSTNRQYDRDSFGEDPESESSNEDPSGASLVTELTSQMARSQFLQELSTKPPGLTQEAL 165

Query: 718 NCLHVEVFSS--IETGLESRVLQ 780
           +CLH EVFSS   E GL+SRVLQ
Sbjct: 166 DCLHQEVFSSNASEIGLDSRVLQ 188


>ref|XP_002313898.1| predicted protein [Populus trichocarpa] gi|222850306|gb|EEE87853.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  137 bits (345), Expect = 6e-30
 Identities = 63/99 (63%), Positives = 79/99 (79%), Gaps = 4/99 (4%)
 Frame = +1

Query: 646 SQMERSQFLQELNEK-PPGLTQEALNCLHVEVFSSIETGLESRVLQ---DCGICLESFTD 813
           ++ +R   +QE ++K PPGLTQ+AL+CL  EVFSS+E G+E  V Q   DC ICLESFT+
Sbjct: 134 NRQKRLHTVQESHKKKPPGLTQDALHCLQSEVFSSVEKGIEGGVSQVSWDCSICLESFTE 193

Query: 814 GDELIHLPCGHKFHSACLDPWIRSCGDCPYCRRCIVVNS 930
           GDELI LPC H+FHSACLDPW+R+CGDCPYCRR +VV +
Sbjct: 194 GDELIRLPCEHRFHSACLDPWVRTCGDCPYCRRDVVVTN 232


>ref|XP_002886587.1| hypothetical protein ARALYDRAFT_475251 [Arabidopsis lyrata subsp.
           lyrata] gi|297332428|gb|EFH62846.1| hypothetical protein
           ARALYDRAFT_475251 [Arabidopsis lyrata subsp. lyrata]
          Length = 238

 Score =  130 bits (326), Expect = 1e-27
 Identities = 65/126 (51%), Positives = 82/126 (65%)
 Frame = +1

Query: 541 VARNRQYGRDSMDEDQESELSSEFPTGDALVTDLTSQMERSQFLQELNEKPPGLTQEALN 720
           ++ N +  R S+ +DQ  E S     GD +      Q+E  Q   E N+KP GLTQ+A+N
Sbjct: 119 LSSNSRSNRVSLGDDQR-ESSFHSINGDPIF-----QLEGLQVTYECNKKPQGLTQDAIN 172

Query: 721 CLHVEVFSSIETGLESRVLQDCGICLESFTDGDELIHLPCGHKFHSACLDPWIRSCGDCP 900
           CLH + FSS E   E   ++DC ICLESFT GD LI LPC H FHS+CL+PW+R+CGDCP
Sbjct: 173 CLHRQTFSSAEVNTE---MKDCSICLESFTKGDMLISLPCTHSFHSSCLNPWLRACGDCP 229

Query: 901 YCRRCI 918
           YCRR I
Sbjct: 230 YCRRAI 235


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