BLASTX nr result

ID: Glycyrrhiza24_contig00011716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011716
         (651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protei...   139   4e-31
ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago...   134   1e-29
ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protei...   129   6e-28
ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei...   122   4e-26
ref|XP_002533105.1| cold-inducible RNA binding protein, putative...   119   4e-25

>ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
          Length = 86

 Score =  139 bits (351), Expect = 4e-31
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = +2

Query: 113 MTQRIGTKLFVSRLSFFTTKEQLMKLFSPFGAVTQANLVVDPRTQRPKGFGFVSYESEIE 292
           M+QRIGTKLFV RLSF+TT+EQL KLFSPFG VTQA+L +DP T+RPKGFGFVS++SEIE
Sbjct: 1   MSQRIGTKLFVHRLSFYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIE 60

Query: 293 AEKAMKAMNGRIVDGRLIFVEPANKK 370
           AEKA KAMNGRIV+GRLI VEPAN+K
Sbjct: 61  AEKACKAMNGRIVNGRLILVEPANEK 86


>ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula]
           gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding
           protein [Medicago truncatula]
           gi|388509994|gb|AFK43063.1| unknown [Medicago
           truncatula]
          Length = 89

 Score =  134 bits (337), Expect = 1e-29
 Identities = 66/86 (76%), Positives = 75/86 (87%)
 Frame = +2

Query: 113 MTQRIGTKLFVSRLSFFTTKEQLMKLFSPFGAVTQANLVVDPRTQRPKGFGFVSYESEIE 292
           M+QRIGTKLFVSRLSF+TT++QL  LFSPFG +T+A L+ D  TQRPKGFGFVSY+SEIE
Sbjct: 1   MSQRIGTKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIE 60

Query: 293 AEKAMKAMNGRIVDGRLIFVEPANKK 370
           AEKA KA+NGRIVDGRLIFVE A  K
Sbjct: 61  AEKARKALNGRIVDGRLIFVEHAKPK 86


>ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max]
          Length = 86

 Score =  129 bits (323), Expect = 6e-28
 Identities = 63/86 (73%), Positives = 76/86 (88%)
 Frame = +2

Query: 113 MTQRIGTKLFVSRLSFFTTKEQLMKLFSPFGAVTQANLVVDPRTQRPKGFGFVSYESEIE 292
           M++RIGTKLFV R+  +TT+EQL KLFSPFG VTQA+L +DP T+RPKGFGFVS++SEIE
Sbjct: 1   MSRRIGTKLFVHRIMLYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIE 60

Query: 293 AEKAMKAMNGRIVDGRLIFVEPANKK 370
           AEKA++AMNGRIV GRLI VE AN+K
Sbjct: 61  AEKALRAMNGRIVSGRLILVELANEK 86


>ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|297746123|emb|CBI16179.3| unnamed protein product
           [Vitis vinifera]
          Length = 112

 Score =  122 bits (307), Expect = 4e-26
 Identities = 58/88 (65%), Positives = 74/88 (84%)
 Frame = +2

Query: 119 QRIGTKLFVSRLSFFTTKEQLMKLFSPFGAVTQANLVVDPRTQRPKGFGFVSYESEIEAE 298
           +R  +++FV+RLS +TT E+L+++FSPFG VTQA L+ DP+TQRPKGFGFV +ESE++AE
Sbjct: 21  RRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAE 80

Query: 299 KAMKAMNGRIVDGRLIFVEPANKK*PGE 382
           KA+KAMNGRIV GRLIFVE A    PGE
Sbjct: 81  KALKAMNGRIVRGRLIFVEIAKTTRPGE 108


>ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis]
           gi|223527096|gb|EEF29277.1| cold-inducible RNA binding
           protein, putative [Ricinus communis]
          Length = 94

 Score =  119 bits (299), Expect = 4e-25
 Identities = 58/90 (64%), Positives = 74/90 (82%)
 Frame = +2

Query: 113 MTQRIGTKLFVSRLSFFTTKEQLMKLFSPFGAVTQANLVVDPRTQRPKGFGFVSYESEIE 292
           M  R+G++LFV RLS +TT ++L KLFSPFG V +A LV+DPRTQ+PKGFGFV+++SE +
Sbjct: 1   MAIRLGSQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQ 60

Query: 293 AEKAMKAMNGRIVDGRLIFVEPANKK*PGE 382
           A+KA+KAMNGRIVDGRL+FVE A     GE
Sbjct: 61  AQKALKAMNGRIVDGRLLFVEVAKSINSGE 90


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