BLASTX nr result
ID: Glycyrrhiza24_contig00011716
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza24_contig00011716 (651 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protei... 139 4e-31 ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago... 134 1e-29 ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protei... 129 6e-28 ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protei... 122 4e-26 ref|XP_002533105.1| cold-inducible RNA binding protein, putative... 119 4e-25 >ref|XP_003543504.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max] Length = 86 Score = 139 bits (351), Expect = 4e-31 Identities = 69/86 (80%), Positives = 79/86 (91%) Frame = +2 Query: 113 MTQRIGTKLFVSRLSFFTTKEQLMKLFSPFGAVTQANLVVDPRTQRPKGFGFVSYESEIE 292 M+QRIGTKLFV RLSF+TT+EQL KLFSPFG VTQA+L +DP T+RPKGFGFVS++SEIE Sbjct: 1 MSQRIGTKLFVHRLSFYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIE 60 Query: 293 AEKAMKAMNGRIVDGRLIFVEPANKK 370 AEKA KAMNGRIV+GRLI VEPAN+K Sbjct: 61 AEKACKAMNGRIVNGRLILVEPANEK 86 >ref|XP_003597341.1| Cold-inducible RNA-binding protein [Medicago truncatula] gi|355486389|gb|AES67592.1| Cold-inducible RNA-binding protein [Medicago truncatula] gi|388509994|gb|AFK43063.1| unknown [Medicago truncatula] Length = 89 Score = 134 bits (337), Expect = 1e-29 Identities = 66/86 (76%), Positives = 75/86 (87%) Frame = +2 Query: 113 MTQRIGTKLFVSRLSFFTTKEQLMKLFSPFGAVTQANLVVDPRTQRPKGFGFVSYESEIE 292 M+QRIGTKLFVSRLSF+TT++QL LFSPFG +T+A L+ D TQRPKGFGFVSY+SEIE Sbjct: 1 MSQRIGTKLFVSRLSFYTTQQQLESLFSPFGVLTEATLITDQNTQRPKGFGFVSYKSEIE 60 Query: 293 AEKAMKAMNGRIVDGRLIFVEPANKK 370 AEKA KA+NGRIVDGRLIFVE A K Sbjct: 61 AEKARKALNGRIVDGRLIFVEHAKPK 86 >ref|XP_003547422.1| PREDICTED: cold-inducible RNA-binding protein-like [Glycine max] Length = 86 Score = 129 bits (323), Expect = 6e-28 Identities = 63/86 (73%), Positives = 76/86 (88%) Frame = +2 Query: 113 MTQRIGTKLFVSRLSFFTTKEQLMKLFSPFGAVTQANLVVDPRTQRPKGFGFVSYESEIE 292 M++RIGTKLFV R+ +TT+EQL KLFSPFG VTQA+L +DP T+RPKGFGFVS++SEIE Sbjct: 1 MSRRIGTKLFVHRIMLYTTQEQLKKLFSPFGLVTQADLALDPITKRPKGFGFVSFKSEIE 60 Query: 293 AEKAMKAMNGRIVDGRLIFVEPANKK 370 AEKA++AMNGRIV GRLI VE AN+K Sbjct: 61 AEKALRAMNGRIVSGRLILVELANEK 86 >ref|XP_002284323.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera] gi|297746123|emb|CBI16179.3| unnamed protein product [Vitis vinifera] Length = 112 Score = 122 bits (307), Expect = 4e-26 Identities = 58/88 (65%), Positives = 74/88 (84%) Frame = +2 Query: 119 QRIGTKLFVSRLSFFTTKEQLMKLFSPFGAVTQANLVVDPRTQRPKGFGFVSYESEIEAE 298 +R +++FV+RLS +TT E+L+++FSPFG VTQA L+ DP+TQRPKGFGFV +ESE++AE Sbjct: 21 RRFSSEIFVTRLSGYTTNEELIEMFSPFGVVTQARLIKDPKTQRPKGFGFVKFESEVDAE 80 Query: 299 KAMKAMNGRIVDGRLIFVEPANKK*PGE 382 KA+KAMNGRIV GRLIFVE A PGE Sbjct: 81 KALKAMNGRIVRGRLIFVEIAKTTRPGE 108 >ref|XP_002533105.1| cold-inducible RNA binding protein, putative [Ricinus communis] gi|223527096|gb|EEF29277.1| cold-inducible RNA binding protein, putative [Ricinus communis] Length = 94 Score = 119 bits (299), Expect = 4e-25 Identities = 58/90 (64%), Positives = 74/90 (82%) Frame = +2 Query: 113 MTQRIGTKLFVSRLSFFTTKEQLMKLFSPFGAVTQANLVVDPRTQRPKGFGFVSYESEIE 292 M R+G++LFV RLS +TT ++L KLFSPFG V +A LV+DPRTQ+PKGFGFV+++SE + Sbjct: 1 MAIRLGSQLFVGRLSCYTTNQKLEKLFSPFGIVKEARLVLDPRTQKPKGFGFVTFDSESQ 60 Query: 293 AEKAMKAMNGRIVDGRLIFVEPANKK*PGE 382 A+KA+KAMNGRIVDGRL+FVE A GE Sbjct: 61 AQKALKAMNGRIVDGRLLFVEVAKSINSGE 90