BLASTX nr result

ID: Glycyrrhiza24_contig00011692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011692
         (1790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596088.1| DEAD-box ATP-dependent RNA helicase [Medicag...   671   0.0  
ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   652   0.0  
ref|XP_003545934.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   649   0.0  
ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helica...   559   e-157
emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]   559   e-157

>ref|XP_003596088.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355485136|gb|AES66339.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 513

 Score =  671 bits (1731), Expect = 0.0
 Identities = 346/454 (76%), Positives = 384/454 (84%)
 Frame = -3

Query: 1710 MDENFPLFKPTRXXXXXXXXXXXXXXKILNSHAENAVVSNTNPNSNNAEDTATATFADLG 1531
            +D+NFPLFKP+R                +++  +N VV++   NSN   +  TATF+DLG
Sbjct: 8    VDQNFPLFKPSRKPSINPTLP-------ISNKPQNDVVTHETLNSN--PENTTATFSDLG 58

Query: 1530 LSEWAVNTCKELGMRTPRRVQRHCIPKVLEGRHVLGIDETGSGKTAAFALPILHGLSVHP 1351
            LSEWAV TCKELGM+TPRRVQ+HCIP++L GRHV+GID+TGSGKTAAFALPIL  L+ H 
Sbjct: 59   LSEWAVKTCKELGMKTPRRVQQHCIPQILAGRHVIGIDQTGSGKTAAFALPILQRLAEHT 118

Query: 1350 FGVFALVVTPTRELAFQLAEQFRALGSSLRVRIAVVVGGMDMLKQTKELVAMPHLVIATP 1171
            FGVFALVVTPTRELAFQLAEQFRALGSSLR+RIAVVVGGMDML+QTKELVA PHLVIATP
Sbjct: 119  FGVFALVVTPTRELAFQLAEQFRALGSSLRLRIAVVVGGMDMLRQTKELVARPHLVIATP 178

Query: 1170 GRIKTLLQENPDIPPVFSKTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFSATT 991
            GRIK LL++NP+I PVF++TKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFSATT
Sbjct: 179  GRIKVLLKDNPEIAPVFARTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFSATT 238

Query: 990  TNNLQKLIERYQDKLYVYEAYEGFKTVETLNQQVVLIPKNDKDVYLMHFLSKMEDMSIRS 811
            T+NLQKL ERYQDKLY +EAYEGFKTVE L QQVV IPKN KDVYL+H LSKMEDM IRS
Sbjct: 239  TSNLQKLRERYQDKLYAFEAYEGFKTVENLKQQVVFIPKNVKDVYLLHILSKMEDMGIRS 298

Query: 810  AIVFVSTCRDCHRLSLMMEVLDQEAAGLYSFKSQAQRLEALHQFKSGKVSILLATDVASR 631
            AIVFVSTCRDCHRL+LM+EVLDQEAA LYSF+SQAQRLEALH FKSGKV +LLATDVA R
Sbjct: 299  AIVFVSTCRDCHRLNLMLEVLDQEAAALYSFRSQAQRLEALHDFKSGKVPVLLATDVAGR 358

Query: 630  GLDIPTVDLVINYDVPRFPRDYIHXXXXXXXXXXXXXALSIVTQNDIVLIREIEALIGRQ 451
            GLDIPTVDLVINYDVPRFPRDYIH             ALS+VTQND+ LIREIE LI RQ
Sbjct: 359  GLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIREIETLIERQ 418

Query: 450  LEMIEYKKGEELPLTRKVFSAKRVAGMRMVDDGF 349
            LEMIEYK+ E L L +KVFSAK VA M+M+DDGF
Sbjct: 419  LEMIEYKENEVLSLMKKVFSAKNVAKMKMMDDGF 452


>ref|XP_003532920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine max]
          Length = 587

 Score =  652 bits (1683), Expect = 0.0
 Identities = 341/459 (74%), Positives = 370/459 (80%), Gaps = 6/459 (1%)
 Frame = -3

Query: 1707 DENFPLFKPTRXXXXXXXXXXXXXXKILNSHAENAVVSNTNPNSNNAEDTATAT------ 1546
            D NFPLFK                     S       SN     +++ +TA         
Sbjct: 9    DPNFPLFKTPSSPAVTTTATHKPL-----STTPITTTSNGERREDHSVETAATVAADAEA 63

Query: 1545 FADLGLSEWAVNTCKELGMRTPRRVQRHCIPKVLEGRHVLGIDETGSGKTAAFALPILHG 1366
            F DLGL+EWAV TC+ELGMR PR VQR CIP+VLEGRHVLGIDETGSGKTAAFALPILH 
Sbjct: 64   FGDLGLAEWAVKTCRELGMRRPRPVQRRCIPRVLEGRHVLGIDETGSGKTAAFALPILHR 123

Query: 1365 LSVHPFGVFALVVTPTRELAFQLAEQFRALGSSLRVRIAVVVGGMDMLKQTKELVAMPHL 1186
            L+ HPFGVFALVVTPTRELAFQLAEQFRALGS++ +RI VVVGGMDML+QTKEL A PHL
Sbjct: 124  LAEHPFGVFALVVTPTRELAFQLAEQFRALGSAVHLRITVVVGGMDMLRQTKELAARPHL 183

Query: 1185 VIATPGRIKTLLQENPDIPPVFSKTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLF 1006
            VIATPGRI  LL+ NPDIPPVFS+TKFLVLDEADRVLDVGFQ+EL+FIFQCLPENRQNLF
Sbjct: 184  VIATPGRIHALLRNNPDIPPVFSRTKFLVLDEADRVLDVGFQEELRFIFQCLPENRQNLF 243

Query: 1005 FSATTTNNLQKLIERYQDKLYVYEAYEGFKTVETLNQQVVLIPKNDKDVYLMHFLSKMED 826
            FSATTT+NLQKL ERYQDK+YVYEAYEGFKTVETL QQ + IPK  KDVYLMH L+KMED
Sbjct: 244  FSATTTSNLQKLRERYQDKMYVYEAYEGFKTVETLKQQAIFIPKKVKDVYLMHILAKMED 303

Query: 825  MSIRSAIVFVSTCRDCHRLSLMMEVLDQEAAGLYSFKSQAQRLEALHQFKSGKVSILLAT 646
            M IRSAIVF+STCRDCHRLSLM+EVLDQEAA LYSFKSQAQRLEALHQFKSGKVSILLAT
Sbjct: 304  MGIRSAIVFISTCRDCHRLSLMLEVLDQEAAALYSFKSQAQRLEALHQFKSGKVSILLAT 363

Query: 645  DVASRGLDIPTVDLVINYDVPRFPRDYIHXXXXXXXXXXXXXALSIVTQNDIVLIREIEA 466
            DVASRGLDIPTVDLVINYDVPRFPRDYIH             ALS+VTQND+ LI EIEA
Sbjct: 364  DVASRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQNDVDLIHEIEA 423

Query: 465  LIGRQLEMIEYKKGEELPLTRKVFSAKRVAGMRMVDDGF 349
            LI +QLEMIEYK+ E L L +KVFSAK VA M+M+DDGF
Sbjct: 424  LIEKQLEMIEYKENEVLSLMKKVFSAKNVAEMKMIDDGF 462


>ref|XP_003545934.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Glycine max]
          Length = 591

 Score =  649 bits (1675), Expect = 0.0
 Identities = 340/469 (72%), Positives = 373/469 (79%), Gaps = 16/469 (3%)
 Frame = -3

Query: 1707 DENFPLFKPTRXXXXXXXXXXXXXXKILNSHAENAVVSNTNPNS------NNAEDTATA- 1549
            D NFPLFK  R               +  +       +  NP S      ++ ++TAT  
Sbjct: 9    DPNFPLFKTPR--------KTPSSPAVTTTATSKPPSTAANPTSDGERIEDHPDETATVA 60

Query: 1548 ---------TFADLGLSEWAVNTCKELGMRTPRRVQRHCIPKVLEGRHVLGIDETGSGKT 1396
                     TF DLGL+EWAV TC+ELGMR PR VQR CIP+VLEGRHVLG+DETGSGKT
Sbjct: 61   DTDTDADAETFGDLGLAEWAVKTCRELGMRRPRGVQRRCIPRVLEGRHVLGVDETGSGKT 120

Query: 1395 AAFALPILHGLSVHPFGVFALVVTPTRELAFQLAEQFRALGSSLRVRIAVVVGGMDMLKQ 1216
            AAFALPILH L+ HPFGVFALVVTPTRELAFQLAEQFRALGS++ +RI VVVGGMDML+Q
Sbjct: 121  AAFALPILHRLAEHPFGVFALVVTPTRELAFQLAEQFRALGSAVHLRITVVVGGMDMLRQ 180

Query: 1215 TKELVAMPHLVIATPGRIKTLLQENPDIPPVFSKTKFLVLDEADRVLDVGFQDELKFIFQ 1036
             KEL A PHLVIATPGRI  LL+ NPDIPPVFS+TKFLVLDEADRVLDVGFQ+EL+FIFQ
Sbjct: 181  AKELAARPHLVIATPGRIHALLRNNPDIPPVFSRTKFLVLDEADRVLDVGFQEELRFIFQ 240

Query: 1035 CLPENRQNLFFSATTTNNLQKLIERYQDKLYVYEAYEGFKTVETLNQQVVLIPKNDKDVY 856
            CLPENRQNLFFSATTT+NLQKL  RYQDK+YVYEAYEGFKTVETL QQ + IPK  KDVY
Sbjct: 241  CLPENRQNLFFSATTTSNLQKLRGRYQDKMYVYEAYEGFKTVETLKQQAIFIPKKVKDVY 300

Query: 855  LMHFLSKMEDMSIRSAIVFVSTCRDCHRLSLMMEVLDQEAAGLYSFKSQAQRLEALHQFK 676
            LMH L KMEDM IRSAIVF+STCRDCHRLSLM+EVLDQEAA LYSFKSQAQRLEALHQFK
Sbjct: 301  LMHILDKMEDMGIRSAIVFISTCRDCHRLSLMLEVLDQEAAALYSFKSQAQRLEALHQFK 360

Query: 675  SGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYIHXXXXXXXXXXXXXALSIVTQN 496
            SGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYIH             ALS+VTQN
Sbjct: 361  SGKVSILLATDVASRGLDIPTVDLVINYDVPRFPRDYIHRVGRTARAGRGGLALSLVTQN 420

Query: 495  DIVLIREIEALIGRQLEMIEYKKGEELPLTRKVFSAKRVAGMRMVDDGF 349
            D+ LI EIEALI +QLEMIEYK+ + L L +KVFSAK VA M+M+DDGF
Sbjct: 421  DVDLIHEIEALIEKQLEMIEYKENDALSLMKKVFSAKNVAEMKMIDDGF 469


>ref|XP_002263207.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 36-like [Vitis
            vinifera] gi|297736137|emb|CBI24175.3| unnamed protein
            product [Vitis vinifera]
          Length = 489

 Score =  559 bits (1441), Expect = e-157
 Identities = 287/457 (62%), Positives = 347/457 (75%), Gaps = 3/457 (0%)
 Frame = -3

Query: 1710 MDENFPLF---KPTRXXXXXXXXXXXXXXKILNSHAENAVVSNTNPNSNNAEDTATATFA 1540
            +DENFPLF   KPT                  N + E  +   TNP S       ++TFA
Sbjct: 7    VDENFPLFSKRKPTPKPSKNSTTTAQ------NPNPEQPLTRTTNPTS------PSSTFA 54

Query: 1539 DLGLSEWAVNTCKELGMRTPRRVQRHCIPKVLEGRHVLGIDETGSGKTAAFALPILHGLS 1360
            DLGL+EWAV  CKELGMR P  VQ HCIP++L G  VLG+ +TGSGKTAAFALPILH L+
Sbjct: 55   DLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLA 114

Query: 1359 VHPFGVFALVVTPTRELAFQLAEQFRALGSSLRVRIAVVVGGMDMLKQTKELVAMPHLVI 1180
              PFGVFALVVTPTRELA+QLAEQFRALGS L +R AVVVGGMDM+ Q + L+  PH+VI
Sbjct: 115  EDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVI 174

Query: 1179 ATPGRIKTLLQENPDIPPVFSKTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFS 1000
            ATPGR+K LL++NPDIP VF++TKFLVLDEADRVLDVGF++EL+ +FQCLP+NRQ L FS
Sbjct: 175  ATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFS 234

Query: 999  ATTTNNLQKLIERYQDKLYVYEAYEGFKTVETLNQQVVLIPKNDKDVYLMHFLSKMEDMS 820
            AT T++LQ L+E   +K Y YEAYEGFKTVE+L QQ + +PKN KDVYL+H LSKME+M 
Sbjct: 235  ATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMG 294

Query: 819  IRSAIVFVSTCRDCHRLSLMMEVLDQEAAGLYSFKSQAQRLEALHQFKSGKVSILLATDV 640
            IRSAI+FVSTCR CH LSL++E LD E A L+SFKSQ+ RL A+H+FKSG+V ILLATDV
Sbjct: 295  IRSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDV 354

Query: 639  ASRGLDIPTVDLVINYDVPRFPRDYIHXXXXXXXXXXXXXALSIVTQNDIVLIREIEALI 460
            ASRGLDIPTVDLV+NYD+PR+PRDY+H             +LSIVTQND+ LI EIEA++
Sbjct: 355  ASRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVL 414

Query: 459  GRQLEMIEYKKGEELPLTRKVFSAKRVAGMRMVDDGF 349
            G+QL+  + K+ E L    KV+ A+RVA M+M+DDGF
Sbjct: 415  GKQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGF 451


>emb|CAN65105.1| hypothetical protein VITISV_021046 [Vitis vinifera]
          Length = 592

 Score =  559 bits (1441), Expect = e-157
 Identities = 287/457 (62%), Positives = 347/457 (75%), Gaps = 3/457 (0%)
 Frame = -3

Query: 1710 MDENFPLF---KPTRXXXXXXXXXXXXXXKILNSHAENAVVSNTNPNSNNAEDTATATFA 1540
            +DENFPLF   KPT                  N + E  +   TNP S       ++TFA
Sbjct: 110  VDENFPLFSKRKPTPKPSKNSTTTAQ------NPNPEQPLTRTTNPTS------PSSTFA 157

Query: 1539 DLGLSEWAVNTCKELGMRTPRRVQRHCIPKVLEGRHVLGIDETGSGKTAAFALPILHGLS 1360
            DLGL+EWAV  CKELGMR P  VQ HCIP++L G  VLG+ +TGSGKTAAFALPILH L+
Sbjct: 158  DLGLAEWAVQACKELGMRRPTPVQHHCIPRILAGDDVLGLAQTGSGKTAAFALPILHRLA 217

Query: 1359 VHPFGVFALVVTPTRELAFQLAEQFRALGSSLRVRIAVVVGGMDMLKQTKELVAMPHLVI 1180
              PFGVFALVVTPTRELA+QLAEQFRALGS L +R AVVVGGMDM+ Q + L+  PH+VI
Sbjct: 218  EDPFGVFALVVTPTRELAYQLAEQFRALGSCLHLRCAVVVGGMDMINQAQTLMQRPHVVI 277

Query: 1179 ATPGRIKTLLQENPDIPPVFSKTKFLVLDEADRVLDVGFQDELKFIFQCLPENRQNLFFS 1000
            ATPGR+K LL++NPDIP VF++TKFLVLDEADRVLDVGF++EL+ +FQCLP+NRQ L FS
Sbjct: 278  ATPGRVKVLLEQNPDIPAVFARTKFLVLDEADRVLDVGFEEELRVVFQCLPKNRQTLLFS 337

Query: 999  ATTTNNLQKLIERYQDKLYVYEAYEGFKTVETLNQQVVLIPKNDKDVYLMHFLSKMEDMS 820
            AT T++LQ L+E   +K Y YEAYEGFKTVE+L QQ + +PKN KDVYL+H LSKME+M 
Sbjct: 338  ATMTSDLQTLLELSSNKAYFYEAYEGFKTVESLKQQYIFVPKNVKDVYLLHILSKMEEMG 397

Query: 819  IRSAIVFVSTCRDCHRLSLMMEVLDQEAAGLYSFKSQAQRLEALHQFKSGKVSILLATDV 640
            IRSAI+FVSTCR CH LSL++E LD E A L+SFKSQ+ RL A+H+FKSG+V ILLATDV
Sbjct: 398  IRSAIIFVSTCRSCHLLSLLLEELDLEVAALHSFKSQSLRLAAVHRFKSGQVPILLATDV 457

Query: 639  ASRGLDIPTVDLVINYDVPRFPRDYIHXXXXXXXXXXXXXALSIVTQNDIVLIREIEALI 460
            ASRGLDIPTVDLV+NYD+PR+PRDY+H             +LSIVTQND+ LI EIEA++
Sbjct: 458  ASRGLDIPTVDLVVNYDIPRYPRDYVHRVGRTARAGRGGLSLSIVTQNDVDLIHEIEAVL 517

Query: 459  GRQLEMIEYKKGEELPLTRKVFSAKRVAGMRMVDDGF 349
            G+QL+  + K+ E L    KV+ A+RVA M+M+DDGF
Sbjct: 518  GKQLDKFDCKEKEVLDNITKVYKARRVATMKMMDDGF 554


Top