BLASTX nr result

ID: Glycyrrhiza24_contig00011686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011686
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630632.1| F-box/kelch-repeat protein [Medicago truncat...   336   8e-90
ref|XP_003612197.1| F-box/kelch-repeat protein [Medicago truncat...   298   3e-78
ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncat...   273   1e-70
ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|35551...   273   1e-70
ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   246   1e-62

>ref|XP_003630632.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355524654|gb|AET05108.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 527

 Score =  336 bits (862), Expect = 8e-90
 Identities = 200/404 (49%), Positives = 247/404 (61%), Gaps = 14/404 (3%)
 Frame = -3

Query: 1371 TGRSMKRCHDYQNDTVLAQPVVETTAKRHRPLSPIGDESLSRRPPPVLPDDLIV-EIXXX 1195
            T  S    H+ QNDTV    V +T  +                P P LP++LI+ EI   
Sbjct: 13   TSPSKTPLHNSQNDTVSTPSVPKTDTEN---------------PLPELPEELIINEILLR 57

Query: 1194 XXXXXXXXXXXVSKSWKTLISDPQFAKNHLRRSTEDLTMTHQRLVSSII-TQHCKIVSYP 1018
                       V KSWKTLISDPQF+K H + ST D       LV+S+I +  C+I++YP
Sbjct: 58   LPVRSLLQFKCVCKSWKTLISDPQFSKTHRKASTAD-----PLLVTSVIHSGKCEIIAYP 112

Query: 1017 VKSLFEYPLTPSKAVSTM-MRRKYHILGSCNGLLCLYDIHQGCVRLWNPCTRLKSKRSPI 841
            VK   E   TP ++ S    RRKYHI+ S NGLLCLYD+ Q    LWNP   LKS+ SP 
Sbjct: 113  VKPPPENLSTPVESFSIFGTRRKYHIIDSFNGLLCLYDVSQFNFTLWNPSINLKSETSPT 172

Query: 840  VVRPD-GIITYHGFGYDQVNDKYKLLVV-----VEDLNETVTKVYTFGSISWITIQNFPC 679
             V  D   +TYHGFGYD VNDKYK+LVV     V D  E VT++YTFG  SW T+ NFP 
Sbjct: 173  NVLSDYKFMTYHGFGYDHVNDKYKVLVVMRNAAVVDYREIVTRIYTFGENSWKTVPNFPG 232

Query: 678  APTRWSGKFVSGTLNWVA--KGGVSSDQWVILSFDLEKETYGEVLLPEQDGVSLRNPVLD 505
                WSGKFVSGTLNW+   + G +S Q  ILSFDL KET+ EVLLP+ DG  +RN  L 
Sbjct: 233  KSHVWSGKFVSGTLNWLVNKRAGGNSSQRGILSFDLGKETFREVLLPQHDGYDVRNCGLY 292

Query: 504  VLSNCLCVCFD-SNKTHWAVWLMKKYGVAESWTKLMMIPHEKFRVSTWTPPLEPLCLSEN 328
            VLSNCLCVCFD SNK HW VW+M +YGV ESWTKLM+IP +K         ++PL +SEN
Sbjct: 293  VLSNCLCVCFDHSNKNHWGVWMMNQYGVTESWTKLMIIPCKKLMRHL----VDPLFISEN 348

Query: 327  GV--LLVRTMYSILVLYDSNNGSLDYTRIWSKRGLDLHVYHESL 202
            GV  L++ ++YS  V Y+ NNG + Y +I  K G ++H+YHESL
Sbjct: 349  GVLILMMNSIYSKFVRYNLNNGRIGYPKILGKLGREMHIYHESL 392


>ref|XP_003612197.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355513532|gb|AES95155.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 380

 Score =  298 bits (762), Expect = 3e-78
 Identities = 187/399 (46%), Positives = 229/399 (57%), Gaps = 16/399 (4%)
 Frame = -3

Query: 1335 NDTVLAQPVVETTAKRHRPLSPIGDESLSRRPPPVLPDDLIVEIXXXXXXXXXXXXXXVS 1156
            N+T    PV ETTA +               P P LP++LIV I              V 
Sbjct: 7    NNTDSTLPVAETTANK---------------PLPFLPEELIVIILLRLPVRSLLRFKCVC 51

Query: 1155 KSWKTLISDPQFAKNHLRRSTEDLTMTHQRLVSSIITQHCKIVSYPVKSLFEYPLTPSKA 976
            KSWKTL SD  FA NH   ST    +     VS+  T   K  +YP++SL E   T    
Sbjct: 52   KSWKTLFSDTHFANNHFLISTVYPQLVACESVSAYRTWEIK--TYPIESLLENSSTTVIP 109

Query: 975  VSTMMRRKYHILGSCNGLLCLYDIHQGCVRLWNPCTRLKSKRSPIVVRPDGIITYHGFGY 796
            VS    ++Y ILGSCNG LCLYD +Q CVRLWNP   LKSK SP + R      Y+GFGY
Sbjct: 110  VSNTGHQRYTILGSCNGFLCLYDNYQRCVRLWNPSINLKSKSSPTIDR----FIYYGFGY 165

Query: 795  DQVNDKYKLLVVVEDLNETVTKVYTFGSISW--ITIQNFPCAPT--RWSGKFVSGTLNWV 628
            DQVN KYKLL V      T T +YTFG  S   + +++FP  P   +  GKFVSGTLNW+
Sbjct: 166  DQVNHKYKLLAVKAFSRITETMIYTFGENSCKNVEVKDFPRYPPNRKHLGKFVSGTLNWI 225

Query: 627  AKGGVSSDQWVILSFDLEKETYGEVLLPEQDGVSLRNPVLDVLSNCLCVCFDSNKTHWAV 448
                    +  ILSFD+EKETY +VLLP Q G ++ +P L VLSNC+CVC     T W +
Sbjct: 226  VDE--RDGRATILSFDIEKETYRQVLLP-QHGYAVYSPGLYVLSNCICVCTSFLDTRWQL 282

Query: 447  WLMKKYGVAESWTKLMMIPHEKF---RVSTWTPPLEPLCLSENG-VLLVRTMYSILVLYD 280
            W+MKKYGVAESWTKLM IPHE      +S W P +EPL +SENG VLL+ T  S L+LY+
Sbjct: 283  WMMKKYGVAESWTKLMSIPHENLLISNISLW-PCVEPLFISENGVVLLMNTSSSQLILYN 341

Query: 279  SNNGSLDYTRI--------WSKRGLDLHVYHESLVSPPC 187
             N+  L + RI        + +  LDLH+YHESL+SP C
Sbjct: 342  LNSRGLYFPRIPPSYLNIYYIEPKLDLHIYHESLLSPQC 380


>ref|XP_003609004.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355510059|gb|AES91201.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 515

 Score =  273 bits (697), Expect = 1e-70
 Identities = 178/400 (44%), Positives = 227/400 (56%), Gaps = 21/400 (5%)
 Frame = -3

Query: 1338 QNDTVLAQPVVETTAKRHRPLSPIGDESLSRRPPPVLPDDLIVEIXXXXXXXXXXXXXXV 1159
            QN TV  Q V E TA                     +P+++IVEI              V
Sbjct: 20   QNVTVFTQSVSEITAD--------------------MPEEIIVEILLRLPVRSLLQFRCV 59

Query: 1158 SKSWKTLISDPQFAKNHLRRSTEDLTMTHQRLVSSIIT-QHCKIVSYPVKSLFEYP---- 994
             K WKTLISDPQFAK H+  ST      + +LVS  ++   C +VSYP+K L + P    
Sbjct: 60   CKLWKTLISDPQFAKKHVSIST-----AYPQLVSVFVSIAKCNLVSYPLKPLLDNPSAHR 114

Query: 993  LTPSKAVSTMMRRKYHILGSCNGLLCLYDIHQGCVRLWNPCTRLKSKRSPIVVRPDGI-- 820
            + P+     +      I+GSCNGLLCL D +Q    LWNP  +LKSK SP ++  D    
Sbjct: 115  VEPAD-FEMIHTTSMTIIGSCNGLLCLSDFYQ--FTLWNPSIKLKSKPSPTIIAFDSFDS 171

Query: 819  --ITYHGFGYDQVNDKYKLLVVVED---LNETVTKVYTFGSISWITIQNFPCAPTRWS-- 661
                Y GFGYDQVND+YK+L VV++   L+ET T +YTFG   W TIQ FPC P+R    
Sbjct: 172  KRFLYRGFGYDQVNDRYKVLAVVQNCYNLDETKTLIYTFGGKDWTTIQKFPCDPSRCDLG 231

Query: 660  ----GKFVSGTLNWVAKGGVSSDQWVILSFDLEKETYGEVLLPEQDGVSLRNPVLDVLSN 493
                GKFVSG LNW+        + VI+ FD+EKETYGE+ LP+  G   +N VL V SN
Sbjct: 232  RLGVGKFVSGNLNWIVS------KKVIVFFDIEKETYGEMSLPQDYGD--KNTVLYVSSN 283

Query: 492  CLCVCFD-SNKTHWAVWLMKKYGVAESWTKLMMIPHEKFRVSTWTPPLEPLCLSENGVLL 316
             + V FD SNKTHW VW+MK+YGV ESWTKLM+IP +K          + L +SE+GVLL
Sbjct: 284  RIYVSFDHSNKTHWVVWMMKEYGVVESWTKLMIIPQDKLTSPGPYCLSDALFISEHGVLL 343

Query: 315  VRTMYSILVLYDSNN-GSLDY-TRIWSKRGLDLHVYHESL 202
            +R  +S L +Y+ NN G LDY T I  +    LH+Y+ESL
Sbjct: 344  MRPQHSKLSVYNLNNDGGLDYCTTISGQFARYLHIYNESL 383


>ref|XP_003608998.1| F-box protein [Medicago truncatula] gi|355510053|gb|AES91195.1| F-box
            protein [Medicago truncatula]
          Length = 607

 Score =  273 bits (697), Expect = 1e-70
 Identities = 178/400 (44%), Positives = 227/400 (56%), Gaps = 21/400 (5%)
 Frame = -3

Query: 1338 QNDTVLAQPVVETTAKRHRPLSPIGDESLSRRPPPVLPDDLIVEIXXXXXXXXXXXXXXV 1159
            QN TV  Q V E TA                     +P+++IVEI              V
Sbjct: 20   QNVTVFTQSVSEITAD--------------------MPEEIIVEILLRLPVRSLLQFRCV 59

Query: 1158 SKSWKTLISDPQFAKNHLRRSTEDLTMTHQRLVSSIIT-QHCKIVSYPVKSLFEYP---- 994
             K WKTLISDPQFAK H+  ST      + +LVS  ++   C +VSYP+K L + P    
Sbjct: 60   CKLWKTLISDPQFAKKHVSIST-----AYPQLVSVFVSIAKCNLVSYPLKPLLDNPSAHR 114

Query: 993  LTPSKAVSTMMRRKYHILGSCNGLLCLYDIHQGCVRLWNPCTRLKSKRSPIVVRPDGI-- 820
            + P+     +      I+GSCNGLLCL D +Q    LWNP  +LKSK SP ++  D    
Sbjct: 115  VEPAD-FEMIHTTSMTIIGSCNGLLCLSDFYQ--FTLWNPSIKLKSKPSPTIIAFDSFDS 171

Query: 819  --ITYHGFGYDQVNDKYKLLVVVED---LNETVTKVYTFGSISWITIQNFPCAPTRWS-- 661
                Y GFGYDQVND+YK+L VV++   L+ET T +YTFG   W TIQ FPC P+R    
Sbjct: 172  KRFLYRGFGYDQVNDRYKVLAVVQNCYNLDETKTLIYTFGGKDWTTIQKFPCDPSRCDLG 231

Query: 660  ----GKFVSGTLNWVAKGGVSSDQWVILSFDLEKETYGEVLLPEQDGVSLRNPVLDVLSN 493
                GKFVSG LNW+        + VI+ FD+EKETYGE+ LP+  G   +N VL V SN
Sbjct: 232  RLGVGKFVSGNLNWIVS------KKVIVFFDIEKETYGEMSLPQDYGD--KNTVLYVSSN 283

Query: 492  CLCVCFD-SNKTHWAVWLMKKYGVAESWTKLMMIPHEKFRVSTWTPPLEPLCLSENGVLL 316
             + V FD SNKTHW VW+MK+YGV ESWTKLM+IP +K          + L +SE+GVLL
Sbjct: 284  RIYVSFDHSNKTHWVVWMMKEYGVVESWTKLMIIPQDKLTSPGPYCLSDALFISEHGVLL 343

Query: 315  VRTMYSILVLYDSNN-GSLDY-TRIWSKRGLDLHVYHESL 202
            +R  +S L +Y+ NN G LDY T I  +    LH+Y+ESL
Sbjct: 344  MRPQHSKLSVYNLNNDGGLDYCTTISGQFARYLHIYNESL 383


>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
            gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  246 bits (628), Expect = 1e-62
 Identities = 164/392 (41%), Positives = 213/392 (54%), Gaps = 18/392 (4%)
 Frame = -3

Query: 1314 PVVETTAKRHRPLSPIGDESLSRRPPPVLPDDLIVEIXXXXXXXXXXXXXXVSKSWKTLI 1135
            P+  ++  + +P+S    ESL   P P LPD+L+VEI              V KSW +LI
Sbjct: 28   PLPPSSVPKQQPMS----ESL---PLPFLPDELVVEILSRLPVKSLLQFRCVCKSWMSLI 80

Query: 1134 SDPQFAKNHLRRSTEDLTMTHQRLVSSIITQHCKIVSYPVKSLFEYPL-TPSKAVSTMMR 958
            SDP F K HL  S+     TH R++ S  T    + S  + SLF  P  T    ++  ++
Sbjct: 81   SDPYFMKKHLHLSSRCTHFTHHRIILSATTAEFHLKSCSLSSLFNNPSSTVCDDLNYPVK 140

Query: 957  RKYH---ILGSCNGLLCLYDIHQGCVRLWNPCTRLKSKRSPIVV--RPDGIITYHGFGYD 793
             K+    I+GSCNGLLC + I   CV LWNP  R+  K  P+    RP G  T  G GYD
Sbjct: 141  NKFRHDGIVGSCNGLLC-FAIKGDCVLLWNPSIRVSKKSPPLGNNWRP-GCFTAFGLGYD 198

Query: 792  QVNDKYKLLVVVEDLNETV----TKVYTFGSISWITIQNFPCA--PTRWSGKFVSGTLNW 631
             VN+ YK++ V  D +E       KVY+  + SW  IQ+FP    P + SGKFVSGTLNW
Sbjct: 199  HVNEDYKVVAVFCDPSEYFIECKVKVYSMATNSWRKIQDFPHGFLPFQNSGKFVSGTLNW 258

Query: 630  VAKGGVS-SDQWVILSFDLEKETYGEVLLPEQDGVSLRNPVLDVLSNCLCVCFDSNKTHW 454
             A   +  S  WVI+S DL KETY EVL P+ +      P L VL  CLC+ +D  KTH+
Sbjct: 259  AANHSIGPSSFWVIVSLDLHKETYREVLPPDYEKEDCSTPSLGVLQGCLCMNYDYKKTHF 318

Query: 453  AVWLMKKYGVAESWTKLMMIPH----EKFRVSTWTPPLEPLCLSENGVLLVRTMYSILVL 286
             VW+MK YGV ESW KL+ IP+    E F  S       P  +SENG +L+   +  L+L
Sbjct: 319  VVWMMKDYGVRESWVKLVSIPYVPNPEDFSYS------GPYYISENGKVLLMFEFD-LIL 371

Query: 285  YDSNNGSLDYTRIWSKRG-LDLHVYHESLVSP 193
            YD  N S  Y +I S +G  D  VY E+LVSP
Sbjct: 372  YDPRNNSFKYPKIESGKGWFDAEVYVETLVSP 403


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