BLASTX nr result

ID: Glycyrrhiza24_contig00011671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00011671
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43681.1| unknown [Lotus japonicus]                              189   3e-46
ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   177   1e-42
ref|XP_003541623.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   171   6e-41
ref|XP_003547246.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   170   1e-40
ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A...   149   2e-34

>gb|AFK43681.1| unknown [Lotus japonicus]
          Length = 365

 Score =  189 bits (479), Expect = 3e-46
 Identities = 104/164 (63%), Positives = 125/164 (76%)
 Frame = -3

Query: 500 VPYRPRVLHSQPPPESGRRVNTXXXXXXXXXXXXXXXXXXARYKESISKSTRGLKEKLLA 321
           VP+R RV++SQ PPES RR+NT                  A+YKESISK TRGLKEKLLA
Sbjct: 201 VPFRARVIYSQTPPESARRLNTPEMFSFPESIKSKFSAASAKYKESISKGTRGLKEKLLA 260

Query: 320 RNATVKELSKGVQREMNAGIAGVARMIERFDLTSKKPSSPLIPDCTGGTSGFPKEGNSVE 141
           RNA+VKELSKGVQREMNAGIAGVARMIER DL+SK+ S+ L PD TG TSGFP+E  SV+
Sbjct: 261 RNASVKELSKGVQREMNAGIAGVARMIERLDLSSKR-SAALFPDRTGETSGFPEEVKSVK 319

Query: 140 ENGIGHSPNEESGNVVHDVSSDAPSLVSSMIAAKMEIPPCVQSG 9
           E    HSP+E++ +VVH V+SDAPSL+S+M+ A++EI P VQSG
Sbjct: 320 E----HSPSEDNEDVVHHVTSDAPSLISNMVPARVEIAPHVQSG 359


>ref|XP_003528675.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 371

 Score =  177 bits (448), Expect = 1e-42
 Identities = 101/168 (60%), Positives = 121/168 (72%), Gaps = 2/168 (1%)
 Frame = -3

Query: 500 VPYRPRVLHSQPPPESGRRVNTXXXXXXXXXXXXXXXXXXARYKESISKSTRGLKEKLLA 321
           +P +PRV++SQP PE+ RR+NT                  AR KESISK+TRGLKEKL+A
Sbjct: 210 MPCKPRVIYSQPSPENARRLNTSEIFSFPESFKSKLSAASARCKESISKNTRGLKEKLIA 269

Query: 320 RNATVKELSKGVQREMNAGIAGVARMIERFDLTSKKPSSPLIPDCTGGTSGFPKEGNSVE 141
           RNA+VKELSKGVQREMNAGIAGVARM+ER DLTSK+ SSPLI          P +G SV+
Sbjct: 270 RNASVKELSKGVQREMNAGIAGVARMVERLDLTSKRSSSPLI----------PVKGKSVQ 319

Query: 140 ENGIGHSPN-EESGNVVHDVSSDAPSLVSSMIAAKMEIPP-CVQSGHD 3
           ENG+   PN EESG +V DV+S+A SL SS++A  +EIPP CVQSGHD
Sbjct: 320 ENGVEQFPNKEESGVLVADVTSNAASLDSSLVAVGVEIPPSCVQSGHD 367


>ref|XP_003541623.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 359

 Score =  171 bits (433), Expect = 6e-41
 Identities = 97/166 (58%), Positives = 112/166 (67%), Gaps = 5/166 (3%)
 Frame = -3

Query: 488 PRVLHSQPP-----PESGRRVNTXXXXXXXXXXXXXXXXXXARYKESISKSTRGLKEKLL 324
           P  +  QPP     PES RR NT                   RYKESISKST GLKEKLL
Sbjct: 192 PSTVSIQPPALNTTPESARRPNTSEISFPESFKSKFSAASA-RYKESISKSTLGLKEKLL 250

Query: 323 ARNATVKELSKGVQREMNAGIAGVARMIERFDLTSKKPSSPLIPDCTGGTSGFPKEGNSV 144
           A N +VKELSKGVQREMNAGIAGVARMIER DL+SK+ S+PLI   +  TS FP  G SV
Sbjct: 251 AHNVSVKELSKGVQREMNAGIAGVARMIERLDLSSKRSSAPLIAVHSVATSDFPSSGKSV 310

Query: 143 EENGIGHSPNEESGNVVHDVSSDAPSLVSSMIAAKMEIPPCVQSGH 6
           EENGIG SP++E+G  VHDVSSD P LV++M + + + PP +QSGH
Sbjct: 311 EENGIGGSPSKENGGAVHDVSSDVPPLVTNMQSFRTKTPPFLQSGH 356


>ref|XP_003547246.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 419

 Score =  170 bits (431), Expect = 1e-40
 Identities = 97/166 (58%), Positives = 109/166 (65%), Gaps = 5/166 (3%)
 Frame = -3

Query: 488 PRVLHSQPP-----PESGRRVNTXXXXXXXXXXXXXXXXXXARYKESISKSTRGLKEKLL 324
           P  +  QPP     P+S RR NT                  ARYKESISK TR LKEKLL
Sbjct: 251 PSTVSIQPPALNTNPDSARRPNTSDMFSFPKSFKSKFSSASARYKESISKGTRDLKEKLL 310

Query: 323 ARNATVKELSKGVQREMNAGIAGVARMIERFDLTSKKPSSPLIPDCTGGTSGFPKEGNSV 144
           A N +VKELSKGVQREMNAGIAGV RMIER DL+SK+ SSPLI   +G TS FP     V
Sbjct: 311 AHNVSVKELSKGVQREMNAGIAGVVRMIERLDLSSKRSSSPLIAVHSGATSDFPSSRKPV 370

Query: 143 EENGIGHSPNEESGNVVHDVSSDAPSLVSSMIAAKMEIPPCVQSGH 6
           EENGIG SP++ESG  VHDVSSD   LV++M + + E PP VQSGH
Sbjct: 371 EENGIGGSPSKESGGAVHDVSSDVLPLVTNMQSFQTETPPFVQSGH 416


>ref|XP_003550504.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Glycine max]
          Length = 376

 Score =  149 bits (377), Expect = 2e-34
 Identities = 92/167 (55%), Positives = 110/167 (65%), Gaps = 1/167 (0%)
 Frame = -3

Query: 500 VPYRPRVLHSQPPPESGRRVNTXXXXXXXXXXXXXXXXXXARYKESISKSTRGLKEKLLA 321
           +P +PRV++SQP PES RR+NT                  AR KESISK+TRGLKEKL+A
Sbjct: 226 MPSKPRVIYSQPSPESARRLNTSEMFSFSESFKSKLSAASARCKESISKNTRGLKEKLIA 285

Query: 320 RNATVKELSKGVQREMNAGIAGVARMIERFDLTSKKPSSPLIPDCTGGTSGFPKEGNSVE 141
           RNA+VKELSKGVQ EMNAGIA VARMIER DLTSK  SS LI          P +G SV+
Sbjct: 286 RNASVKELSKGVQCEMNAGIACVARMIERLDLTSKWSSSALI----------PVKGKSVQ 335

Query: 140 ENGIGHSPNEESGNVVHDVSSDAPSLVSSMIAAKMEIPP-CVQSGHD 3
           ENG+          +V +V+S+A SL SS++A  +E PP CVQSGHD
Sbjct: 336 ENGV----------LVGNVTSNASSLDSSLVAVGVETPPSCVQSGHD 372


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